Wall clock time and date at job start Mon Mar 30 2020 06:51:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35917 * 117.00073 * 2 1 4 4 C 1.38749 * 120.04518 * 359.97172 * 3 2 1 5 5 C 1.38116 * 119.95794 * 180.02562 * 4 3 2 6 6 C 1.38387 * 120.04393 * 359.97438 * 5 4 3 7 7 Cl 1.73606 * 119.95765 * 180.02562 * 6 5 4 8 8 C 1.38353 * 120.08606 * 359.77170 * 6 5 4 9 9 C 1.50700 * 119.97728 * 180.27564 * 8 6 5 10 10 C 1.38161 * 120.03825 * 0.50542 * 8 6 5 11 11 C 1.50701 * 120.01936 * 179.74567 * 10 8 6 12 12 C 1.50699 * 115.56205 * 282.14652 * 11 10 8 13 13 H 1.08000 * 119.99565 * 140.28221 * 12 11 10 14 14 C 1.37878 * 120.00131 * 320.28579 * 12 11 10 15 15 N 1.31516 * 119.99880 * 348.48134 * 14 12 11 16 16 Si 1.86796 * 119.99932 * 168.47994 * 14 12 11 17 17 H 1.48507 * 109.47037 * 0.02562 * 16 14 12 18 18 H 1.48500 * 109.47153 * 119.99766 * 16 14 12 19 19 H 1.48496 * 109.47399 * 239.99985 * 16 14 12 20 20 C 1.53007 * 117.49673 * 136.45905 * 11 10 8 21 21 C 1.53001 * 117.49859 * 67.83921 * 11 10 8 22 22 H 1.09004 * 109.47057 * 60.00335 * 1 2 3 23 23 H 1.08997 * 109.47321 * 180.02562 * 1 2 3 24 24 H 1.08998 * 109.47256 * 300.00650 * 1 2 3 25 25 H 1.07997 * 120.01476 * 0.02562 * 4 3 2 26 26 H 1.07994 * 119.97889 * 180.02562 * 5 4 3 27 27 H 1.09001 * 109.46724 * 274.81589 * 9 8 6 28 28 H 1.08997 * 109.47453 * 34.82437 * 9 8 6 29 29 H 1.09000 * 109.46626 * 154.82078 * 9 8 6 30 30 H 0.96993 * 119.99659 * 185.00486 * 15 14 12 31 31 H 1.08999 * 117.49588 * 0.02562 * 20 11 10 32 32 H 1.08996 * 117.49804 * 145.02005 * 20 11 10 33 33 H 1.08999 * 117.50169 * 214.97950 * 21 11 10 34 34 H 1.09004 * 117.49861 * 359.97438 * 21 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2110 0.0000 4 6 1.2913 2.3753 -0.0006 5 6 1.9202 3.6049 -0.0011 6 6 3.3022 3.6763 -0.0005 7 17 4.0904 5.2231 -0.0005 8 6 4.0566 2.5165 0.0054 9 6 5.5614 2.5971 0.0123 10 6 3.4311 1.2846 0.0001 11 6 4.2533 0.0216 0.0008 12 6 4.8532 -0.3644 -1.3267 13 1 5.8554 -0.7644 -1.3704 14 6 4.1227 -0.2068 -2.4853 15 7 2.8369 0.0617 -2.4206 16 14 4.9593 -0.3746 -4.1470 17 1 6.3995 -0.6771 -3.9478 18 1 4.3237 -1.4772 -4.9122 19 1 4.8198 0.8964 -4.9021 20 6 3.8103 -1.1092 0.9315 21 6 5.0626 -0.2939 1.2603 22 1 -0.3633 0.5138 -0.8900 23 1 -0.3634 -1.0276 0.0005 24 1 -0.3634 0.5139 0.8899 25 1 0.2127 2.3199 -0.0006 26 1 1.3331 4.5113 -0.0012 27 1 5.9244 2.7006 -1.0103 28 1 5.8764 3.4601 0.5988 29 1 5.9718 1.6887 0.4533 30 1 2.3081 0.1008 -3.2328 31 1 2.9241 -0.9397 1.5429 32 1 3.9529 -2.1322 0.5836 33 1 6.0290 -0.7806 1.1289 34 1 5.0007 0.4123 2.0883 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260455959.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:51:13 Heat of formation + Delta-G solvation = 5.142652 kcal Electronic energy + Delta-G solvation = -18891.134203 eV Core-core repulsion = 16009.122412 eV Total energy + Delta-G solvation = -2882.011791 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 266.081 amu Computer time = 0.37 seconds Orbital eigenvalues (eV) -39.56313 -37.06989 -36.21753 -35.15424 -32.06248 -31.48824 -29.22992 -26.68740 -25.91601 -25.49213 -22.27356 -21.18246 -20.37002 -19.18035 -17.01142 -16.38347 -15.56981 -14.99467 -14.85505 -14.52673 -13.84151 -13.50242 -13.16153 -13.06793 -12.76313 -12.03067 -11.63213 -11.60233 -11.31436 -11.21749 -11.07406 -10.98282 -10.89289 -10.50406 -10.44490 -10.22198 -10.15973 -9.80089 -9.29610 -9.23183 -8.66237 -8.14366 -7.73198 -7.05750 -5.95086 -4.02687 2.15500 2.22813 2.89232 3.28122 3.37833 3.40574 4.20861 4.41098 4.58928 5.03997 5.43312 5.52569 5.61136 5.66048 5.78699 5.90909 6.01796 6.08091 6.16644 6.35176 6.37277 6.50297 6.56678 6.66572 6.71098 6.85598 6.93679 7.04878 7.17743 7.34715 7.35445 7.42745 7.69623 7.87294 8.37637 8.44490 8.90982 9.55272 11.02644 Molecular weight = 266.08amu Principal moments of inertia in cm(-1) A = 0.014907 B = 0.010118 C = 0.008451 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1877.845854 B = 2766.615414 C = 3312.249423 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.266 6.266 3 C 0.195 3.805 4 C -0.229 4.229 5 C -0.091 4.091 6 C -0.085 4.085 7 Cl -0.102 7.102 8 C -0.041 4.041 9 C -0.107 4.107 10 C -0.004 4.004 11 C 0.096 3.904 12 C -0.491 4.491 13 H 0.063 0.937 14 C 0.077 3.923 15 N -0.855 5.855 16 Si 0.884 3.116 17 H -0.272 1.272 18 H -0.286 1.286 19 H -0.283 1.283 20 C -0.183 4.183 21 C -0.210 4.210 22 H 0.047 0.953 23 H 0.087 0.913 24 H 0.038 0.962 25 H 0.120 0.880 26 H 0.116 0.884 27 H 0.069 0.931 28 H 0.053 0.947 29 H 0.081 0.919 30 H 0.258 0.742 31 H 0.068 0.932 32 H 0.077 0.923 33 H 0.078 0.922 34 H 0.068 0.932 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.040 4.279 5.085 7.308 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.177 6.177 3 C 0.149 3.851 4 C -0.248 4.248 5 C -0.110 4.110 6 C -0.111 4.111 7 Cl -0.073 7.073 8 C -0.042 4.042 9 C -0.164 4.164 10 C -0.005 4.005 11 C 0.095 3.905 12 C -0.528 4.528 13 H 0.081 0.919 14 C -0.128 4.128 15 N -0.489 5.489 16 Si 0.712 3.288 17 H -0.197 1.197 18 H -0.212 1.212 19 H -0.209 1.209 20 C -0.221 4.221 21 C -0.247 4.247 22 H 0.066 0.934 23 H 0.105 0.895 24 H 0.056 0.944 25 H 0.138 0.862 26 H 0.135 0.865 27 H 0.088 0.912 28 H 0.072 0.928 29 H 0.100 0.900 30 H 0.068 0.932 31 H 0.087 0.913 32 H 0.095 0.905 33 H 0.096 0.904 34 H 0.086 0.914 Dipole moment (debyes) X Y Z Total from point charges -3.050 4.307 4.952 7.237 hybrid contribution -0.087 0.241 -1.196 1.224 sum -3.137 4.548 3.756 6.681 Atomic orbital electron populations 1.22860 0.81408 1.02559 0.99806 1.86366 1.18308 1.25975 1.87019 1.18598 0.91655 0.83567 0.91328 1.20901 0.99173 0.92080 1.12648 1.20377 0.92048 0.97195 1.01418 1.20407 0.92250 0.84800 1.13687 1.98268 1.81459 1.30048 1.97551 1.19233 0.96267 0.90031 0.98643 1.20763 0.90917 1.02367 1.02325 1.18465 0.89822 0.93763 0.98434 1.17389 0.94570 0.88808 0.89720 1.20395 1.00513 1.43343 0.88556 0.91894 1.24930 0.94723 0.94408 0.98742 1.70007 1.04937 1.46380 1.27620 0.86664 0.80070 0.77612 0.84493 1.19656 1.21190 1.20941 1.22916 0.95387 0.97891 1.05860 1.22994 0.95793 1.04845 1.01101 0.93411 0.89482 0.94376 0.86244 0.86549 0.91206 0.92795 0.90015 0.93236 0.91315 0.90474 0.90378 0.91384 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.48 9.81 101.05 0.99 1.47 16 2 O -0.27 -5.73 7.29 -19.48 -0.14 -5.88 16 3 C 0.20 4.31 5.17 -39.22 -0.20 4.11 16 4 C -0.23 -4.44 9.04 -39.44 -0.36 -4.80 16 5 C -0.09 -1.72 9.82 -39.57 -0.39 -2.11 16 6 C -0.09 -1.69 6.31 -39.48 -0.25 -1.94 16 7 Cl -0.10 -1.75 27.39 -51.86 -1.42 -3.17 16 8 C -0.04 -0.88 5.88 -104.61 -0.61 -1.50 16 9 C -0.11 -2.11 9.07 36.01 0.33 -1.79 16 10 C 0.00 -0.08 3.90 -104.48 -0.41 -0.49 16 11 C 0.10 2.29 0.77 -156.81 -0.12 2.16 16 12 C -0.49 -12.88 8.87 -34.44 -0.31 -13.19 16 13 H 0.06 1.66 7.84 -52.49 -0.41 1.24 16 14 C 0.08 2.05 5.23 -17.82 -0.09 1.95 16 15 N -0.85 -22.99 10.19 55.43 0.56 -22.43 16 16 Si 0.88 20.81 29.56 -169.99 -5.02 15.78 16 17 H -0.27 -6.33 7.11 56.52 0.40 -5.93 16 18 H -0.29 -6.72 7.11 56.52 0.40 -6.32 16 19 H -0.28 -6.76 7.11 56.52 0.40 -6.36 16 20 C -0.18 -4.11 8.82 -26.73 -0.24 -4.34 16 21 C -0.21 -4.43 8.09 -26.73 -0.22 -4.65 16 22 H 0.05 0.76 7.66 -51.93 -0.40 0.36 16 23 H 0.09 1.23 8.14 -51.93 -0.42 0.81 16 24 H 0.04 0.53 7.66 -51.93 -0.40 0.13 16 25 H 0.12 1.98 6.30 -52.49 -0.33 1.65 16 26 H 0.12 1.87 8.06 -52.49 -0.42 1.44 16 27 H 0.07 1.41 8.14 -51.93 -0.42 0.99 16 28 H 0.05 0.93 7.11 -51.93 -0.37 0.56 16 29 H 0.08 1.62 5.36 -51.93 -0.28 1.34 16 30 H 0.26 6.77 8.32 -40.82 -0.34 6.43 16 31 H 0.07 1.50 7.11 -51.93 -0.37 1.13 16 32 H 0.08 1.76 8.14 -51.93 -0.42 1.34 16 33 H 0.08 1.59 8.14 -51.93 -0.42 1.16 16 34 H 0.07 1.34 8.14 -51.93 -0.42 0.92 16 LS Contribution 292.66 15.07 4.41 4.41 Total: -1.00 -27.77 292.66 -7.71 -35.48 By element: Atomic # 1 Polarization: 5.13 SS G_CDS: -4.23 Total: 0.90 kcal Atomic # 6 Polarization: -23.23 SS G_CDS: -1.87 Total: -25.10 kcal Atomic # 7 Polarization: -22.99 SS G_CDS: 0.56 Total: -22.43 kcal Atomic # 8 Polarization: -5.73 SS G_CDS: -0.14 Total: -5.88 kcal Atomic # 14 Polarization: 20.81 SS G_CDS: -5.02 Total: 15.78 kcal Atomic # 17 Polarization: -1.75 SS G_CDS: -1.42 Total: -3.17 kcal Total LS contribution 4.41 Total: 4.41 kcal Total: -27.77 -7.71 -35.48 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260455959.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 40.627 kcal (2) G-P(sol) polarization free energy of solvation -27.773 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 12.853 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.711 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.484 kcal (6) G-S(sol) free energy of system = (1) + (5) 5.143 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds