Wall clock time and date at job start Mon Mar 30 2020 07:01:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35902 * 116.99734 * 2 1 4 4 C 1.38736 * 120.04717 * 0.02562 * 3 2 1 5 5 C 1.38235 * 119.92711 * 180.02562 * 4 3 2 6 6 Cl 1.73603 * 119.98257 * 179.97438 * 5 4 3 7 7 C 1.38410 * 120.03381 * 359.97438 * 5 4 3 8 8 C 1.50700 * 119.95071 * 180.02562 * 7 5 4 9 9 C 1.38220 * 120.09652 * 0.02944 * 7 5 4 10 10 C 1.50696 * 119.96755 * 179.97438 * 9 7 5 11 11 C 1.50703 * 115.54780 * 66.26313 * 10 9 7 12 12 H 1.08007 * 119.99524 * 219.66020 * 11 10 9 13 13 C 1.37872 * 120.00113 * 39.65268 * 11 10 9 14 14 N 1.31515 * 120.00253 * 8.29141 * 13 11 10 15 15 Si 1.86799 * 119.99885 * 188.55912 * 13 11 10 16 16 H 1.48495 * 109.47084 * 90.00609 * 15 13 11 17 17 H 1.48504 * 109.47042 * 210.00444 * 15 13 11 18 18 H 1.48497 * 109.47583 * 330.00346 * 15 13 11 19 19 C 1.52997 * 117.52174 * 211.96073 * 10 9 7 20 20 C 1.52997 * 117.50202 * 280.59474 * 10 9 7 21 21 C 1.38179 * 120.06600 * 0.24597 * 9 7 5 22 22 H 1.09011 * 109.47007 * 299.99477 * 1 2 3 23 23 H 1.08993 * 109.47740 * 59.99718 * 1 2 3 24 24 H 1.09003 * 109.46743 * 180.02562 * 1 2 3 25 25 H 1.07996 * 120.03422 * 0.04960 * 4 3 2 26 26 H 1.09005 * 109.46876 * 270.01977 * 8 7 5 27 27 H 1.08996 * 109.47395 * 30.02026 * 8 7 5 28 28 H 1.09002 * 109.46894 * 150.02296 * 8 7 5 29 29 H 0.96993 * 120.00349 * 184.97063 * 14 13 11 30 30 H 1.08997 * 117.50389 * 214.97424 * 19 10 9 31 31 H 1.09005 * 117.49925 * 359.97438 * 19 10 9 32 32 H 1.09002 * 117.49520 * 359.96604 * 20 10 9 33 33 H 1.08995 * 117.50562 * 144.99828 * 20 10 9 34 34 H 1.08008 * 120.00849 * 179.70258 * 21 9 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 1.2912 2.3751 0.0005 5 6 1.9213 3.6055 0.0000 6 17 0.9784 5.0631 0.0000 7 6 3.3036 3.6759 -0.0005 8 6 3.9886 5.0182 -0.0005 9 6 4.0567 2.5168 -0.0012 10 6 5.5615 2.5969 -0.0023 11 6 6.1824 3.1779 1.2419 12 1 7.0309 3.8416 1.1626 13 6 5.6673 2.8625 2.4812 14 7 4.7439 1.9327 2.5924 15 14 6.2757 3.7611 4.0017 16 1 5.4367 4.9640 4.2346 17 1 6.1860 2.8597 5.1785 18 1 7.6879 4.1739 3.8010 19 6 6.3281 1.4849 -0.7212 20 6 6.2528 2.8836 -1.3368 21 6 3.4311 1.2848 -0.0064 22 1 -0.3633 0.5138 0.8901 23 1 -0.3634 0.5138 -0.8899 24 1 -0.3633 -1.0277 0.0005 25 1 0.2127 2.3200 0.0018 26 1 4.1530 5.3422 -1.0283 27 1 3.3614 5.7462 0.5140 28 1 4.9469 4.9371 0.5126 29 1 4.3298 1.7608 3.4525 30 1 7.2815 1.1736 -0.2943 31 1 5.7440 0.6948 -1.1931 32 1 5.6190 3.0138 -2.2140 33 1 7.1566 3.4924 -1.3150 34 1 4.0205 0.3797 -0.0117 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260467154.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:01:49 Heat of formation + Delta-G solvation = -1.236116 kcal Electronic energy + Delta-G solvation = -18484.766895 eV Core-core repulsion = 15602.478500 eV Total energy + Delta-G solvation = -2882.288395 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 266.081 amu Computer time = 0.39 seconds Orbital eigenvalues (eV) -39.62762 -37.80266 -36.28525 -34.99889 -32.19574 -31.22223 -29.73616 -27.34943 -25.74379 -25.17155 -22.46340 -21.36280 -20.49698 -19.25774 -17.58403 -16.12015 -15.69993 -15.28948 -14.65507 -14.48094 -14.05982 -13.94063 -13.40631 -13.28938 -12.91527 -12.13446 -11.75972 -11.62465 -11.36979 -11.28845 -11.19910 -11.01588 -10.77428 -10.64064 -10.39875 -10.35896 -10.13865 -9.91751 -9.53676 -9.23050 -8.87046 -8.30266 -7.72137 -7.22884 -6.07939 -4.15125 2.07645 2.23354 2.74266 3.26352 3.34641 3.35529 3.78429 4.34290 4.53197 4.95274 5.30541 5.40051 5.42440 5.50027 5.66466 5.78768 5.85817 6.07099 6.12295 6.30583 6.37145 6.51622 6.57424 6.62406 6.64846 6.80234 6.94735 6.97662 7.16845 7.22365 7.29510 7.59734 7.71046 7.79051 8.02597 8.26823 8.80190 9.44259 10.93205 Molecular weight = 266.08amu Principal moments of inertia in cm(-1) A = 0.015612 B = 0.008662 C = 0.007789 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1793.025672 B = 3231.645946 C = 3593.923495 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 O -0.318 6.318 3 C 0.118 3.882 4 C -0.223 4.223 5 C -0.008 4.008 6 Cl -0.095 7.095 7 C -0.095 4.095 8 C -0.117 4.117 9 C 0.079 3.921 10 C 0.083 3.917 11 C -0.493 4.493 12 H 0.066 0.934 13 C 0.077 3.923 14 N -0.859 5.859 15 Si 0.885 3.115 16 H -0.278 1.278 17 H -0.286 1.286 18 H -0.272 1.272 19 C -0.200 4.200 20 C -0.198 4.198 21 C -0.103 4.103 22 H 0.050 0.950 23 H 0.049 0.951 24 H 0.092 0.908 25 H 0.121 0.879 26 H 0.053 0.947 27 H 0.051 0.949 28 H 0.103 0.897 29 H 0.263 0.737 30 H 0.081 0.919 31 H 0.068 0.932 32 H 0.069 0.931 33 H 0.080 0.920 34 H 0.125 0.875 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.754 0.465 -5.113 8.484 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.232 6.232 3 C 0.073 3.927 4 C -0.243 4.243 5 C -0.034 4.034 6 Cl -0.066 7.066 7 C -0.096 4.096 8 C -0.173 4.173 9 C 0.078 3.922 10 C 0.082 3.918 11 C -0.529 4.529 12 H 0.084 0.916 13 C -0.129 4.129 14 N -0.493 5.493 15 Si 0.712 3.288 16 H -0.203 1.203 17 H -0.212 1.212 18 H -0.197 1.197 19 C -0.238 4.238 20 C -0.236 4.236 21 C -0.122 4.122 22 H 0.069 0.931 23 H 0.068 0.932 24 H 0.110 0.890 25 H 0.139 0.861 26 H 0.072 0.928 27 H 0.070 0.930 28 H 0.121 0.879 29 H 0.073 0.927 30 H 0.100 0.900 31 H 0.087 0.913 32 H 0.088 0.912 33 H 0.099 0.901 34 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges -6.841 0.255 -4.949 8.447 hybrid contribution -0.314 0.572 1.039 1.227 sum -7.155 0.827 -3.910 8.196 Atomic orbital electron populations 1.22917 0.79678 1.02963 1.00928 1.86060 1.20326 1.27299 1.89524 1.18720 0.92188 0.82979 0.98777 1.20619 0.99165 0.90881 1.13588 1.20326 0.91026 0.85676 1.06365 1.98283 1.73028 1.38150 1.97176 1.19368 0.90083 0.96925 1.03189 1.20903 1.03012 0.92250 1.01181 1.18779 0.94815 0.89632 0.88994 1.17666 0.85969 0.97333 0.90822 1.20352 1.15677 1.28726 0.88185 0.91555 1.24958 0.95247 0.93959 0.98757 1.70016 1.25761 1.28296 1.25242 0.86680 0.79422 0.79873 0.82785 1.20346 1.21214 1.19700 1.23069 1.03208 0.91097 1.06436 1.22915 1.02829 1.00122 0.97694 1.20183 0.89884 0.98900 1.03219 0.93103 0.93243 0.88975 0.86087 0.92842 0.93002 0.87857 0.92695 0.89998 0.91323 0.91196 0.90100 0.85708 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.40 9.81 101.05 0.99 1.39 16 2 O -0.32 -5.84 10.50 -19.43 -0.20 -6.04 16 3 C 0.12 2.41 6.69 -39.22 -0.26 2.15 16 4 C -0.22 -4.28 8.82 -39.40 -0.35 -4.63 16 5 C -0.01 -0.15 6.31 -39.52 -0.25 -0.40 16 6 Cl -0.10 -1.65 27.29 -51.86 -1.42 -3.06 16 7 C -0.09 -2.06 5.86 -104.57 -0.61 -2.67 16 8 C -0.12 -2.36 9.19 36.01 0.33 -2.03 16 9 C 0.08 1.80 3.52 -104.65 -0.37 1.44 16 10 C 0.08 1.92 1.13 -156.82 -0.18 1.74 16 11 C -0.49 -12.46 6.87 -34.44 -0.24 -12.70 16 12 H 0.07 1.67 7.83 -52.48 -0.41 1.25 16 13 C 0.08 1.98 5.28 -17.82 -0.09 1.89 16 14 N -0.86 -23.15 11.33 55.43 0.63 -22.52 16 15 Si 0.89 20.35 29.55 -169.99 -5.02 15.33 16 16 H -0.28 -6.40 7.11 56.52 0.40 -6.00 16 17 H -0.29 -6.66 7.11 56.52 0.40 -6.25 16 18 H -0.27 -6.16 7.11 56.52 0.40 -5.76 16 19 C -0.20 -4.31 9.42 -26.73 -0.25 -4.57 16 20 C -0.20 -4.04 9.94 -26.73 -0.27 -4.31 16 21 C -0.10 -2.32 8.44 -39.43 -0.33 -2.65 16 22 H 0.05 0.64 7.66 -51.92 -0.40 0.25 16 23 H 0.05 0.58 7.66 -51.93 -0.40 0.18 16 24 H 0.09 0.94 8.14 -51.93 -0.42 0.52 16 25 H 0.12 2.00 6.30 -52.49 -0.33 1.66 16 26 H 0.05 0.97 8.14 -51.93 -0.42 0.55 16 27 H 0.05 0.98 6.90 -51.93 -0.36 0.63 16 28 H 0.10 2.27 5.31 -51.93 -0.28 1.99 16 29 H 0.26 6.96 8.32 -40.82 -0.34 6.62 16 30 H 0.08 1.77 8.14 -51.93 -0.42 1.35 16 31 H 0.07 1.40 7.16 -51.93 -0.37 1.03 16 32 H 0.07 1.33 8.14 -51.93 -0.42 0.91 16 33 H 0.08 1.58 8.14 -51.93 -0.42 1.16 16 34 H 0.12 2.86 7.05 -52.48 -0.37 2.49 16 LS Contribution 296.15 15.07 4.46 4.46 Total: -1.00 -27.01 296.15 -7.59 -34.60 By element: Atomic # 1 Polarization: 6.75 SS G_CDS: -4.16 Total: 2.58 kcal Atomic # 6 Polarization: -23.47 SS G_CDS: -1.88 Total: -25.35 kcal Atomic # 7 Polarization: -23.15 SS G_CDS: 0.63 Total: -22.52 kcal Atomic # 8 Polarization: -5.84 SS G_CDS: -0.20 Total: -6.04 kcal Atomic # 14 Polarization: 20.35 SS G_CDS: -5.02 Total: 15.33 kcal Atomic # 17 Polarization: -1.65 SS G_CDS: -1.42 Total: -3.06 kcal Total LS contribution 4.46 Total: 4.46 kcal Total: -27.01 -7.59 -34.60 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260467154.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 33.360 kcal (2) G-P(sol) polarization free energy of solvation -27.007 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 6.353 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.589 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.597 kcal (6) G-S(sol) free energy of system = (1) + (5) -1.236 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.39 seconds