Wall clock time and date at job start Mon Mar 30 2020 06:52:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.38198 * 119.96432 * 2 1 4 4 C 1.38661 * 119.95812 * 179.97438 * 3 2 1 5 5 O 1.35928 * 120.05862 * 179.97438 * 4 3 2 6 6 C 1.38860 * 119.88046 * 0.02562 * 4 3 2 7 7 Cl 1.73603 * 120.03485 * 180.02562 * 6 4 3 8 8 C 1.38208 * 119.92335 * 359.75013 * 6 4 3 9 9 C 1.38233 * 119.96159 * 180.02562 * 2 1 3 10 10 C 1.50702 * 119.93767 * 359.97438 * 9 2 1 11 11 H 1.08997 * 109.47292 * 354.50284 * 10 9 2 12 12 C 1.50707 * 109.46769 * 114.49791 * 10 9 2 13 13 H 1.07994 * 120.00065 * 0.02562 * 12 10 9 14 14 C 1.37881 * 119.99660 * 179.97438 * 12 10 9 15 15 N 1.31512 * 120.00091 * 359.97438 * 14 12 10 16 16 Si 1.86803 * 119.99610 * 180.02562 * 14 12 10 17 17 H 1.48497 * 109.47162 * 359.97438 * 16 14 12 18 18 H 1.48506 * 109.46714 * 239.99946 * 16 14 12 19 19 H 1.48498 * 109.47050 * 120.00313 * 16 14 12 20 20 C 1.52999 * 109.46981 * 234.49578 * 10 9 2 21 21 C 1.52999 * 117.49503 * 128.75051 * 20 10 9 22 22 C 1.53001 * 117.49639 * 60.09531 * 20 10 9 23 23 H 1.08995 * 109.47002 * 264.34582 * 1 2 3 24 24 H 1.09001 * 109.46481 * 24.34394 * 1 2 3 25 25 H 1.08993 * 109.47027 * 144.34052 * 1 2 3 26 26 H 1.08005 * 120.02010 * 0.02562 * 3 2 1 27 27 H 0.96694 * 113.99832 * 90.00150 * 5 4 3 28 28 H 1.07999 * 119.98169 * 180.25068 * 8 6 4 29 29 H 0.97002 * 119.99751 * 0.02562 * 15 14 12 30 30 H 1.08993 * 115.55140 * 274.41579 * 20 10 9 31 31 H 1.09003 * 117.50197 * 0.02562 * 21 20 10 32 32 H 1.08996 * 117.50213 * 145.02028 * 21 20 10 33 33 H 1.09001 * 117.49389 * 214.97806 * 22 20 10 34 34 H 1.08998 * 117.49873 * 359.97438 * 22 20 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1972 1.1973 0.0000 4 6 3.5839 1.1971 0.0005 5 8 4.2648 2.3735 0.0000 6 6 4.2755 -0.0070 0.0005 7 17 6.0115 -0.0118 0.0019 8 6 3.5803 -1.2014 0.0052 9 6 2.1974 -1.1976 -0.0005 10 6 1.4416 -2.5014 -0.0005 11 1 0.3744 -2.3028 0.0984 12 6 1.6989 -3.2311 -1.2938 13 1 2.3454 -2.7947 -2.0407 14 6 1.1098 -4.4565 -1.5229 15 7 0.3237 -4.9887 -0.6127 16 14 1.4293 -5.3613 -3.1256 17 1 2.3425 -4.5556 -3.9753 18 1 0.1446 -5.5707 -3.8404 19 1 2.0542 -6.6768 -2.8353 20 6 1.9110 -3.3630 1.1734 21 6 0.8385 -3.9392 2.1000 22 6 1.7328 -2.7944 2.5826 23 1 -0.3633 -0.1012 1.0226 24 1 -0.3632 0.9363 -0.4236 25 1 -0.3633 -0.8349 -0.5991 26 1 1.6570 2.1325 0.0004 27 1 4.4615 2.7144 0.8832 28 1 4.1173 -2.1385 0.0093 29 1 0.1581 -4.5189 0.2197 30 1 2.7940 -3.9735 0.9849 31 1 -0.2015 -3.7048 1.8731 32 1 1.0162 -4.9285 2.5215 33 1 2.4986 -3.0312 3.3213 34 1 1.2815 -1.8064 2.6733 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260476137.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:52:33 Heat of formation + Delta-G solvation = -15.604558 kcal Electronic energy + Delta-G solvation = -18207.138766 eV Core-core repulsion = 15324.227309 eV Total energy + Delta-G solvation = -2882.911458 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 266.081 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -39.73657 -37.67521 -36.20873 -36.00528 -32.79301 -31.98814 -30.60261 -27.20650 -25.92056 -23.41180 -22.19868 -21.71277 -20.79154 -19.35726 -17.84046 -16.97538 -15.99169 -15.57681 -15.01350 -14.42764 -13.80407 -13.66843 -13.39051 -13.09045 -12.93645 -12.79109 -12.34140 -11.99942 -11.81262 -11.32039 -10.94420 -10.86707 -10.82619 -10.64807 -10.36815 -10.27378 -10.11819 -10.04977 -9.60476 -9.19134 -8.64335 -8.36089 -8.30645 -7.76515 -6.32076 -4.12721 1.52231 1.67573 2.48242 3.43283 3.44764 3.59785 3.94110 4.37851 4.50795 4.68509 5.13128 5.30290 5.38185 5.59857 5.63361 5.69494 5.86196 5.88123 5.93541 6.00882 6.11750 6.24114 6.26483 6.45953 6.52702 6.57142 6.66481 6.80597 6.87062 6.91966 7.11183 7.24540 7.52442 7.78965 8.09601 8.42178 8.87455 9.60674 11.04407 Molecular weight = 266.08amu Principal moments of inertia in cm(-1) A = 0.018226 B = 0.006997 C = 0.006417 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1535.930487 B = 4000.879875 C = 4362.070331 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.114 4.114 2 C -0.079 4.079 3 C -0.136 4.136 4 C 0.085 3.915 5 O -0.491 6.491 6 C -0.064 4.064 7 Cl -0.079 7.079 8 C -0.082 4.082 9 C -0.015 4.015 10 C 0.089 3.911 11 H 0.039 0.961 12 C -0.597 4.597 13 H 0.052 0.948 14 C 0.028 3.972 15 N -0.912 5.912 16 Si 1.067 2.933 17 H -0.289 1.289 18 H -0.287 1.287 19 H -0.287 1.287 20 C -0.108 4.108 21 C -0.167 4.167 22 C -0.208 4.208 23 H 0.066 0.934 24 H 0.059 0.941 25 H 0.083 0.917 26 H 0.127 0.873 27 H 0.381 0.619 28 H 0.135 0.865 29 H 0.285 0.715 30 H 0.092 0.908 31 H 0.087 0.913 32 H 0.082 0.918 33 H 0.077 0.923 34 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.625 9.555 4.819 11.299 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.170 4.170 2 C -0.079 4.079 3 C -0.155 4.155 4 C 0.040 3.960 5 O -0.299 6.299 6 C -0.091 4.091 7 Cl -0.050 7.050 8 C -0.100 4.100 9 C -0.015 4.015 10 C 0.071 3.929 11 H 0.057 0.943 12 C -0.634 4.634 13 H 0.071 0.929 14 C -0.178 4.178 15 N -0.549 5.549 16 Si 0.896 3.104 17 H -0.215 1.215 18 H -0.214 1.214 19 H -0.214 1.214 20 C -0.127 4.127 21 C -0.204 4.204 22 C -0.245 4.245 23 H 0.084 0.916 24 H 0.078 0.922 25 H 0.102 0.898 26 H 0.145 0.855 27 H 0.236 0.764 28 H 0.153 0.847 29 H 0.099 0.901 30 H 0.110 0.890 31 H 0.106 0.894 32 H 0.100 0.900 33 H 0.096 0.904 34 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges 3.377 8.116 3.372 9.415 hybrid contribution 0.704 1.406 1.354 2.075 sum 4.081 9.522 4.726 11.387 Atomic orbital electron populations 1.20825 0.91050 1.02888 1.02269 1.19793 0.96445 0.91987 0.99658 1.21083 0.92246 0.98303 1.03828 1.17969 0.89604 0.83819 1.04599 1.84861 1.76284 1.35906 1.32898 1.21360 0.83974 0.94827 1.08955 1.98320 1.10653 1.98947 1.97122 1.20871 0.94145 0.96046 0.98959 1.20174 0.92610 0.95938 0.92787 1.17791 0.94355 0.86934 0.93863 0.94325 1.21885 1.33776 1.06479 1.01302 0.92919 1.25674 0.93591 0.95102 1.03446 1.70699 1.33876 1.41408 1.08928 0.83571 0.76202 0.75749 0.74905 1.21509 1.21386 1.21391 1.22688 0.99625 1.00979 0.89399 1.22773 0.96450 0.96583 1.04642 1.23020 1.03773 0.97880 0.99841 0.91571 0.92243 0.89836 0.85478 0.76426 0.84683 0.90068 0.89028 0.89439 0.89973 0.90410 0.90126 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.80 9.14 36.01 0.33 -1.47 16 2 C -0.08 -1.40 5.88 -104.64 -0.62 -2.02 16 3 C -0.14 -2.18 9.62 -39.44 -0.38 -2.56 16 4 C 0.09 1.40 6.70 -39.19 -0.26 1.13 16 5 O -0.49 -6.93 12.97 -19.51 -0.25 -7.18 16 6 C -0.06 -1.13 6.33 -39.36 -0.25 -1.38 16 7 Cl -0.08 -1.26 28.51 -51.86 -1.48 -2.74 16 8 C -0.08 -1.59 8.75 -39.57 -0.35 -1.93 16 9 C -0.01 -0.30 4.38 -104.60 -0.46 -0.75 16 10 C 0.09 2.02 1.59 -92.92 -0.15 1.87 16 11 H 0.04 0.92 5.33 -51.93 -0.28 0.64 16 12 C -0.60 -15.59 8.30 -34.44 -0.29 -15.88 16 13 H 0.05 1.43 7.73 -52.49 -0.41 1.02 16 14 C 0.03 0.76 5.30 -17.82 -0.09 0.66 16 15 N -0.91 -25.50 13.38 55.43 0.74 -24.75 16 16 Si 1.07 24.48 29.90 -169.99 -5.08 19.39 16 17 H -0.29 -6.44 7.11 56.52 0.40 -6.04 16 18 H -0.29 -6.51 7.11 56.52 0.40 -6.11 16 19 H -0.29 -6.52 7.11 56.52 0.40 -6.12 16 20 C -0.11 -2.32 3.62 -90.62 -0.33 -2.65 16 21 C -0.17 -3.34 8.14 -26.70 -0.22 -3.56 16 22 C -0.21 -3.78 9.87 -26.69 -0.26 -4.04 16 23 H 0.07 0.96 8.14 -51.93 -0.42 0.53 16 24 H 0.06 0.79 8.05 -51.93 -0.42 0.37 16 25 H 0.08 1.50 6.53 -51.93 -0.34 1.16 16 26 H 0.13 1.72 8.06 -52.48 -0.42 1.29 16 27 H 0.38 3.57 9.06 45.56 0.41 3.98 16 28 H 0.14 2.71 7.91 -52.49 -0.41 2.29 16 29 H 0.28 7.56 3.55 -40.82 -0.14 7.42 16 30 H 0.09 2.11 8.11 -51.93 -0.42 1.69 16 31 H 0.09 1.79 7.42 -51.93 -0.39 1.40 16 32 H 0.08 1.59 8.14 -51.93 -0.42 1.17 16 33 H 0.08 1.29 8.14 -51.93 -0.42 0.87 16 34 H 0.08 1.41 8.14 -51.93 -0.42 0.99 16 LS Contribution 297.99 15.07 4.49 4.49 Total: -1.00 -28.60 297.99 -8.20 -36.80 By element: Atomic # 1 Polarization: 9.88 SS G_CDS: -3.30 Total: 6.57 kcal Atomic # 6 Polarization: -29.27 SS G_CDS: -3.32 Total: -32.59 kcal Atomic # 7 Polarization: -25.50 SS G_CDS: 0.74 Total: -24.75 kcal Atomic # 8 Polarization: -6.93 SS G_CDS: -0.25 Total: -7.18 kcal Atomic # 14 Polarization: 24.48 SS G_CDS: -5.08 Total: 19.39 kcal Atomic # 17 Polarization: -1.26 SS G_CDS: -1.48 Total: -2.74 kcal Total LS contribution 4.49 Total: 4.49 kcal Total: -28.60 -8.20 -36.80 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260476137.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 21.193 kcal (2) G-P(sol) polarization free energy of solvation -28.596 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -7.402 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.202 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.798 kcal (6) G-S(sol) free energy of system = (1) + (5) -15.605 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds