Wall clock time and date at job start Mon Mar 30 2020 07:51:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.42901 * 113.99710 * 2 1 4 4 C 1.50700 * 109.47150 * 180.02562 * 3 2 1 5 5 C 1.38239 * 120.00478 * 0.03937 * 4 3 2 6 6 C 1.38220 * 120.01173 * 179.97438 * 5 4 3 7 7 C 1.38264 * 120.02872 * 0.02562 * 6 5 4 8 8 C 1.50695 * 119.99252 * 179.97438 * 7 6 5 9 9 C 1.50699 * 115.54792 * 234.67217 * 8 7 6 10 10 H 1.07996 * 120.00273 * 268.77659 * 9 8 7 11 11 C 1.37888 * 119.99554 * 88.78443 * 9 8 7 12 12 N 1.31516 * 119.99400 * 169.99019 * 11 9 8 13 13 Si 1.86794 * 120.00137 * 349.98579 * 11 9 8 14 14 H 1.48502 * 109.46926 * 85.13941 * 13 11 9 15 15 H 1.48501 * 109.47353 * 205.14286 * 13 11 9 16 16 H 1.48503 * 109.47025 * 325.14053 * 13 11 9 17 17 C 1.53003 * 117.49904 * 89.00816 * 8 7 6 18 18 C 1.52999 * 117.50212 * 20.34554 * 8 7 6 19 19 C 1.38189 * 120.00952 * 359.97267 * 7 6 5 20 20 C 1.38331 * 120.01119 * 180.02562 * 4 3 2 21 21 Cl 1.73598 * 120.00948 * 0.29145 * 20 4 3 22 22 H 1.09004 * 109.46977 * 179.97438 * 1 2 3 23 23 H 1.08995 * 109.46951 * 299.99626 * 1 2 3 24 24 H 1.08997 * 109.47319 * 60.00058 * 1 2 3 25 25 H 1.09001 * 109.46957 * 60.00222 * 3 2 1 26 26 H 1.09002 * 109.47233 * 299.99770 * 3 2 1 27 27 H 1.07997 * 119.99223 * 359.96361 * 5 4 3 28 28 H 1.08002 * 119.98467 * 179.97438 * 6 5 4 29 29 H 0.97001 * 119.99525 * 179.97438 * 12 11 9 30 30 H 1.08999 * 117.50264 * 359.97438 * 17 8 7 31 31 H 1.09006 * 117.49563 * 145.02190 * 17 8 7 32 32 H 1.08995 * 117.49945 * 214.97584 * 18 8 7 33 33 H 1.09003 * 117.49936 * 0.02562 * 18 8 7 34 34 H 1.08004 * 120.00577 * 180.02562 * 19 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 3.5125 1.1866 -0.0006 5 6 4.1072 -0.0614 -0.0019 6 6 5.4851 -0.1706 -0.0030 7 6 6.2694 0.9680 -0.0023 8 6 7.7716 0.8480 -0.0030 9 6 8.4824 1.5790 1.1067 10 1 8.8153 2.5955 0.9572 11 6 8.7080 0.9499 2.3128 12 7 9.4943 1.5068 3.2078 13 14 7.8966 -0.6931 2.6754 14 1 8.7261 -1.7894 2.1139 15 1 7.7712 -0.8698 4.1445 16 1 6.5474 -0.7262 2.0559 17 6 8.4734 0.7695 -1.3603 18 6 8.3743 -0.4762 -0.4762 19 6 5.6760 2.2161 -0.0011 20 6 4.2968 2.3261 -0.0002 21 17 3.5507 3.8936 0.0087 22 1 -0.3633 -1.0277 -0.0005 23 1 -0.3633 0.5138 0.8900 24 1 -0.3634 0.5138 -0.8900 25 1 1.6886 1.8464 0.8900 26 1 1.6886 1.8464 -0.8900 27 1 3.4950 -0.9511 -0.0019 28 1 5.9492 -1.1458 -0.0036 29 1 9.6527 1.0645 4.0565 30 1 7.8487 0.8042 -2.2527 31 1 9.4496 1.2462 -1.4504 32 1 9.2852 -0.8185 0.0148 33 1 7.6843 -1.2606 -0.7875 34 1 6.2888 3.1055 -0.0009 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260485148.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:51:57 Heat of formation + Delta-G solvation = -4.410515 kcal Electronic energy + Delta-G solvation = -17817.780022 eV Core-core repulsion = 14935.353974 eV Total energy + Delta-G solvation = -2882.426047 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 266.081 amu Computer time = 1.42 seconds Orbital eigenvalues (eV) -39.45631 -37.84455 -36.60655 -35.70810 -32.17464 -31.31702 -30.25790 -27.28767 -25.97278 -25.16201 -22.59666 -21.60450 -21.12885 -19.20510 -16.98631 -16.47394 -16.12311 -15.94899 -15.03331 -14.73976 -14.50456 -14.32376 -13.60142 -13.46654 -13.01509 -12.74291 -12.46619 -12.27131 -11.59658 -11.53807 -11.36081 -11.18143 -10.88006 -10.77205 -10.52917 -10.42539 -10.00700 -9.88887 -9.75441 -9.41742 -8.71615 -8.59638 -8.24168 -7.79368 -6.17119 -4.20134 1.63706 1.84188 2.46090 3.29733 3.39550 3.46633 3.65693 4.11589 4.42143 4.87057 4.93454 5.10850 5.17686 5.22161 5.30780 5.40519 5.48280 5.49517 5.56360 5.77979 5.92516 6.00637 6.09899 6.24498 6.41554 6.46122 6.53158 6.67187 6.71513 7.01471 7.07022 7.15199 7.21955 7.43693 7.66803 8.41682 8.85073 9.46190 10.93623 Molecular weight = 266.08amu Principal moments of inertia in cm(-1) A = 0.020344 B = 0.006612 C = 0.006068 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1375.988592 B = 4233.659887 C = 4613.280753 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.032 3.968 2 O -0.387 6.387 3 C 0.111 3.889 4 C -0.110 4.110 5 C -0.091 4.091 6 C -0.121 4.121 7 C -0.002 4.002 8 C 0.027 3.973 9 C -0.487 4.487 10 H 0.080 0.920 11 C 0.084 3.916 12 N -0.891 5.891 13 Si 0.864 3.136 14 H -0.275 1.275 15 H -0.295 1.295 16 H -0.244 1.244 17 C -0.168 4.168 18 C -0.197 4.197 19 C -0.087 4.087 20 C -0.032 4.032 21 Cl -0.088 7.088 22 H 0.085 0.915 23 H 0.041 0.959 24 H 0.040 0.960 25 H 0.062 0.938 26 H 0.061 0.939 27 H 0.131 0.869 28 H 0.122 0.878 29 H 0.266 0.734 30 H 0.074 0.926 31 H 0.091 0.909 32 H 0.091 0.909 33 H 0.075 0.925 34 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.568 -1.927 -7.278 16.398 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 O -0.306 6.306 3 C 0.035 3.965 4 C -0.111 4.111 5 C -0.109 4.109 6 C -0.139 4.139 7 C -0.003 4.003 8 C 0.026 3.974 9 C -0.524 4.524 10 H 0.098 0.902 11 C -0.119 4.119 12 N -0.527 5.527 13 Si 0.691 3.309 14 H -0.200 1.200 15 H -0.221 1.221 16 H -0.168 1.168 17 C -0.206 4.206 18 C -0.234 4.234 19 C -0.106 4.106 20 C -0.058 4.058 21 Cl -0.059 7.059 22 H 0.104 0.896 23 H 0.059 0.941 24 H 0.059 0.941 25 H 0.080 0.920 26 H 0.079 0.921 27 H 0.149 0.851 28 H 0.140 0.860 29 H 0.076 0.924 30 H 0.092 0.908 31 H 0.109 0.891 32 H 0.110 0.890 33 H 0.094 0.906 34 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -14.438 -1.958 -7.078 16.199 hybrid contribution -0.612 -0.502 0.505 0.940 sum -15.051 -2.460 -6.573 16.607 Atomic orbital electron populations 1.22725 0.81081 1.02676 0.99963 1.87854 1.19501 1.27730 1.95467 1.21159 0.90191 0.84472 1.00668 1.19197 0.93565 0.92512 1.05865 1.20775 0.94323 0.96431 0.99401 1.21240 0.93178 0.98986 1.00523 1.19869 0.96208 0.91394 0.92782 1.18217 0.86732 0.97142 0.95343 1.20153 1.35787 1.01105 0.95338 0.90186 1.24942 0.93613 0.97605 0.95786 1.69906 1.34913 1.39958 1.07910 0.87067 0.82399 0.84376 0.77093 1.20049 1.22130 1.16772 1.22869 1.01989 1.02091 0.93608 1.23056 1.03227 0.91491 1.05609 1.20782 0.91075 0.99085 0.99635 1.20558 0.93090 0.84467 1.07688 1.98317 1.82745 1.27736 1.97111 0.89632 0.94060 0.94109 0.92022 0.92083 0.85078 0.86021 0.92412 0.90772 0.89099 0.89044 0.90620 0.84567 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.30 11.01 101.05 1.11 1.41 16 2 O -0.39 -5.22 9.18 -35.23 -0.32 -5.55 16 3 C 0.11 1.53 5.30 36.01 0.19 1.72 16 4 C -0.11 -1.86 5.88 -104.59 -0.62 -2.47 16 5 C -0.09 -1.59 9.38 -39.59 -0.37 -1.96 16 6 C -0.12 -2.32 7.36 -39.58 -0.29 -2.61 16 7 C 0.00 -0.04 4.65 -104.63 -0.49 -0.52 16 8 C 0.03 0.60 1.11 -156.81 -0.17 0.42 16 9 C -0.49 -13.11 9.12 -34.44 -0.31 -13.42 16 10 H 0.08 2.34 8.06 -52.49 -0.42 1.92 16 11 C 0.08 2.36 5.45 -17.82 -0.10 2.26 16 12 N -0.89 -26.58 13.96 55.43 0.77 -25.81 16 13 Si 0.86 21.02 25.44 -169.99 -4.32 16.70 16 14 H -0.27 -6.50 7.09 56.52 0.40 -6.10 16 15 H -0.29 -7.35 7.11 56.52 0.40 -6.95 16 16 H -0.24 -5.61 4.61 56.52 0.26 -5.35 16 17 C -0.17 -3.32 9.94 -26.69 -0.27 -3.58 16 18 C -0.20 -4.03 7.36 -26.69 -0.20 -4.23 16 19 C -0.09 -1.73 9.24 -39.55 -0.37 -2.09 16 20 C -0.03 -0.56 6.31 -39.50 -0.25 -0.81 16 21 Cl -0.09 -1.34 27.99 -51.86 -1.45 -2.79 16 22 H 0.09 0.66 8.14 -51.93 -0.42 0.24 16 23 H 0.04 0.35 8.14 -51.93 -0.42 -0.08 16 24 H 0.04 0.33 8.14 -51.93 -0.42 -0.09 16 25 H 0.06 0.81 8.14 -51.93 -0.42 0.39 16 26 H 0.06 0.76 8.14 -51.93 -0.42 0.34 16 27 H 0.13 2.08 7.01 -52.49 -0.37 1.71 16 28 H 0.12 2.22 6.23 -52.49 -0.33 1.89 16 29 H 0.27 7.51 8.31 -40.82 -0.34 7.17 16 30 H 0.07 1.31 8.14 -51.93 -0.42 0.88 16 31 H 0.09 1.79 8.14 -51.93 -0.42 1.37 16 32 H 0.09 1.98 7.56 -51.93 -0.39 1.59 16 33 H 0.08 1.38 6.58 -51.93 -0.34 1.04 16 34 H 0.14 2.73 8.06 -52.48 -0.42 2.31 16 LS Contribution 296.29 15.07 4.46 4.46 Total: -1.00 -29.07 296.29 -7.49 -36.57 By element: Atomic # 1 Polarization: 6.78 SS G_CDS: -4.51 Total: 2.27 kcal Atomic # 6 Polarization: -23.74 SS G_CDS: -2.12 Total: -25.87 kcal Atomic # 7 Polarization: -26.58 SS G_CDS: 0.77 Total: -25.81 kcal Atomic # 8 Polarization: -5.22 SS G_CDS: -0.32 Total: -5.55 kcal Atomic # 14 Polarization: 21.02 SS G_CDS: -4.32 Total: 16.70 kcal Atomic # 17 Polarization: -1.34 SS G_CDS: -1.45 Total: -2.79 kcal Total LS contribution 4.46 Total: 4.46 kcal Total: -29.07 -7.49 -36.57 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260485148.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.158 kcal (2) G-P(sol) polarization free energy of solvation -29.074 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 3.084 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.494 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.568 kcal (6) G-S(sol) free energy of system = (1) + (5) -4.411 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.42 seconds