Wall clock time and date at job start Mon Mar 30 2020 06:51:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35924 * 117.00116 * 2 1 4 4 C 1.38707 * 120.05665 * 359.97438 * 3 2 1 5 5 C 1.38154 * 119.95320 * 180.02562 * 4 3 2 6 6 C 1.50706 * 119.96108 * 180.02562 * 5 4 3 7 7 C 1.38274 * 120.07940 * 0.02562 * 5 4 3 8 8 C 1.50701 * 119.94126 * 179.97438 * 7 5 4 9 9 C 1.50705 * 115.54815 * 294.33062 * 8 7 5 10 10 H 1.08002 * 119.99817 * 144.72889 * 9 8 7 11 11 C 1.37872 * 119.99905 * 324.72303 * 9 8 7 12 12 N 1.31514 * 120.00337 * 351.59389 * 11 9 8 13 13 Si 1.86804 * 119.99833 * 171.59472 * 11 9 8 14 14 H 1.48497 * 109.47234 * 90.00263 * 13 11 9 15 15 H 1.48503 * 109.46909 * 210.00150 * 13 11 9 16 16 H 1.48503 * 109.47071 * 329.99967 * 13 11 9 17 17 C 1.52999 * 117.49806 * 148.66108 * 8 7 5 18 18 C 1.53003 * 117.49870 * 79.99997 * 8 7 5 19 19 C 1.38241 * 120.12032 * 359.97438 * 7 5 4 20 20 C 1.38263 * 120.04037 * 359.76802 * 19 7 5 21 21 Cl 1.73599 * 120.03771 * 180.27588 * 20 19 7 22 22 H 1.09004 * 109.47081 * 299.99806 * 1 2 3 23 23 H 1.08998 * 109.46841 * 180.02562 * 1 2 3 24 24 H 1.08992 * 109.47140 * 60.00115 * 1 2 3 25 25 H 1.07995 * 120.02233 * 0.02962 * 4 3 2 26 26 H 1.08994 * 109.47048 * 86.25857 * 6 5 4 27 27 H 1.08998 * 109.47414 * 206.26466 * 6 5 4 28 28 H 1.09007 * 109.46892 * 326.26046 * 6 5 4 29 29 H 0.96999 * 120.00572 * 185.01228 * 12 11 9 30 30 H 1.08994 * 117.49959 * 359.97438 * 17 8 7 31 31 H 1.09004 * 117.49947 * 145.02471 * 17 8 7 32 32 H 1.09007 * 117.49574 * 214.97958 * 18 8 7 33 33 H 1.08993 * 117.50171 * 359.97438 * 18 8 7 34 34 H 1.07998 * 119.98364 * 180.02562 * 19 7 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0461 1.2111 0.0000 4 6 1.2918 2.3751 -0.0005 5 6 1.9213 3.6050 -0.0011 6 6 1.1019 4.8698 -0.0011 7 6 3.3022 3.6767 -0.0016 8 6 3.9856 5.0199 -0.0028 9 6 3.7806 5.8523 -1.2422 10 1 3.7020 6.9267 -1.1642 11 6 3.6934 5.2424 -2.4756 12 7 3.9526 3.9585 -2.5942 13 14 3.2071 6.2397 -3.9784 14 1 4.4257 6.7982 -4.6174 15 1 2.4982 5.3638 -4.9456 16 1 2.3108 7.3499 -3.5669 17 6 5.3393 5.1243 0.7025 18 6 4.0963 5.7573 1.3332 19 6 4.0570 2.5186 -0.0011 20 6 3.4322 1.2852 0.0048 21 17 4.3802 -0.1691 0.0127 22 1 -0.3633 0.5138 0.8900 23 1 -0.3633 -1.0277 0.0005 24 1 -0.3633 0.5138 -0.8899 25 1 0.2133 2.3201 -0.0005 26 1 0.8485 5.1385 1.0244 27 1 1.6776 5.6757 -0.4562 28 1 0.1869 4.7100 -0.5715 29 1 3.9625 3.5447 -3.4714 30 1 5.7353 4.2217 1.1677 31 1 6.0815 5.7956 0.2704 32 1 4.0214 6.8447 1.3156 33 1 3.6746 5.2712 2.2129 34 1 5.1354 2.5772 -0.0011 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260507507.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:51:08 Heat of formation + Delta-G solvation = 0.028447 kcal Electronic energy + Delta-G solvation = -18471.476372 eV Core-core repulsion = 15589.242812 eV Total energy + Delta-G solvation = -2882.233560 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 266.081 amu Computer time = 0.38 seconds Orbital eigenvalues (eV) -39.61782 -37.79955 -35.91079 -35.08899 -32.23532 -31.56795 -29.09395 -27.39963 -25.72881 -25.59652 -22.11410 -21.39005 -20.57873 -19.17060 -17.24035 -16.69771 -15.74694 -15.33868 -14.70234 -14.59154 -13.88050 -13.50223 -13.29461 -13.01418 -12.75709 -12.33541 -12.12418 -11.72888 -11.51876 -11.13783 -11.00249 -10.95351 -10.71556 -10.55551 -10.43988 -10.36744 -10.14058 -9.96218 -9.49867 -9.18002 -8.85035 -8.31387 -7.84208 -7.10617 -6.03613 -4.14207 2.08895 2.31213 2.94867 3.22893 3.32096 3.33127 3.74086 4.31142 4.55673 4.93165 5.28369 5.39968 5.44867 5.53865 5.65787 5.72202 5.86712 6.07608 6.23693 6.31058 6.39412 6.44937 6.50201 6.61785 6.62959 6.73176 6.89364 6.99145 7.21008 7.27985 7.32575 7.56327 7.76388 7.78185 7.99086 8.28350 8.80347 9.43272 10.92627 Molecular weight = 266.08amu Principal moments of inertia in cm(-1) A = 0.018216 B = 0.007881 C = 0.007448 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1536.751846 B = 3551.922604 C = 3758.430733 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.032 3.968 2 O -0.316 6.316 3 C 0.105 3.895 4 C -0.206 4.206 5 C -0.033 4.033 6 C -0.121 4.121 7 C 0.019 3.981 8 C 0.087 3.913 9 C -0.496 4.496 10 H 0.065 0.935 11 C 0.078 3.922 12 N -0.858 5.858 13 Si 0.886 3.114 14 H -0.280 1.280 15 H -0.285 1.285 16 H -0.271 1.271 17 C -0.206 4.206 18 C -0.202 4.202 19 C -0.038 4.038 20 C -0.070 4.070 21 Cl -0.091 7.091 22 H 0.050 0.950 23 H 0.091 0.909 24 H 0.051 0.949 25 H 0.120 0.880 26 H 0.054 0.946 27 H 0.107 0.893 28 H 0.046 0.954 29 H 0.264 0.736 30 H 0.067 0.933 31 H 0.080 0.920 32 H 0.079 0.921 33 H 0.069 0.931 34 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.166 -4.036 5.027 8.261 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 O -0.230 6.230 3 C 0.060 3.940 4 C -0.225 4.225 5 C -0.034 4.034 6 C -0.178 4.178 7 C 0.018 3.982 8 C 0.087 3.913 9 C -0.533 4.533 10 H 0.083 0.917 11 C -0.129 4.129 12 N -0.492 5.492 13 Si 0.714 3.286 14 H -0.206 1.206 15 H -0.211 1.211 16 H -0.196 1.196 17 C -0.244 4.244 18 C -0.239 4.239 19 C -0.057 4.057 20 C -0.097 4.097 21 Cl -0.062 7.062 22 H 0.068 0.932 23 H 0.110 0.890 24 H 0.069 0.931 25 H 0.137 0.863 26 H 0.072 0.928 27 H 0.125 0.875 28 H 0.065 0.935 29 H 0.074 0.926 30 H 0.086 0.914 31 H 0.099 0.901 32 H 0.097 0.903 33 H 0.087 0.913 34 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges -5.062 -4.541 4.879 8.369 hybrid contribution -0.305 0.340 -1.054 1.149 sum -5.367 -4.202 3.824 7.816 Atomic orbital electron populations 1.22909 0.79533 1.02899 1.01010 1.86065 1.20344 1.26947 1.89609 1.18388 0.90291 0.84298 1.01040 1.20796 0.98739 0.91580 1.11390 1.19431 0.93781 0.93799 0.96349 1.20971 0.98761 0.97335 1.00699 1.18815 0.91488 0.93607 0.94284 1.17651 0.92976 0.90175 0.90525 1.20362 1.51401 0.92376 0.89116 0.91715 1.24974 0.94337 0.94743 0.98797 1.69962 1.45546 1.09951 1.23785 0.86670 0.78958 0.80141 0.82873 1.20595 1.21101 1.19614 1.23088 0.93023 1.01425 1.06830 1.22931 1.04382 0.98725 0.97892 1.20512 0.99927 0.88896 0.96374 1.19969 0.87964 0.87563 1.14160 1.98282 1.72511 1.37907 1.97506 0.93182 0.89024 0.93071 0.86257 0.92754 0.87501 0.93497 0.92593 0.91443 0.90118 0.90288 0.91295 0.85606 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.41 9.81 101.05 0.99 1.41 16 2 O -0.32 -5.67 9.96 -19.50 -0.19 -5.86 16 3 C 0.10 2.10 6.68 -39.20 -0.26 1.84 16 4 C -0.21 -4.00 8.71 -39.44 -0.34 -4.35 16 5 C -0.03 -0.70 5.85 -104.64 -0.61 -1.31 16 6 C -0.12 -2.31 9.63 36.01 0.35 -1.96 16 7 C 0.02 0.43 3.29 -104.61 -0.34 0.09 16 8 C 0.09 2.00 1.19 -156.81 -0.19 1.82 16 9 C -0.50 -12.39 6.88 -34.44 -0.24 -12.63 16 10 H 0.06 1.61 7.83 -52.49 -0.41 1.20 16 11 C 0.08 1.98 5.28 -17.82 -0.09 1.88 16 12 N -0.86 -22.85 11.16 55.43 0.62 -22.23 16 13 Si 0.89 20.05 29.55 -169.99 -5.02 15.03 16 14 H -0.28 -6.36 7.11 56.52 0.40 -5.96 16 15 H -0.29 -6.56 7.11 56.52 0.40 -6.16 16 16 H -0.27 -6.02 7.11 56.52 0.40 -5.62 16 17 C -0.21 -4.41 9.43 -26.69 -0.25 -4.66 16 18 C -0.20 -4.09 9.94 -26.69 -0.27 -4.36 16 19 C -0.04 -0.86 8.31 -39.57 -0.33 -1.19 16 20 C -0.07 -1.47 6.33 -39.36 -0.25 -1.72 16 21 Cl -0.09 -1.73 28.50 -51.86 -1.48 -3.21 16 22 H 0.05 0.59 7.66 -51.93 -0.40 0.19 16 23 H 0.09 0.93 8.14 -51.93 -0.42 0.51 16 24 H 0.05 0.64 7.66 -51.93 -0.40 0.25 16 25 H 0.12 1.97 6.30 -52.49 -0.33 1.63 16 26 H 0.05 0.91 8.14 -51.93 -0.42 0.49 16 27 H 0.11 2.27 5.17 -51.93 -0.27 2.00 16 28 H 0.05 0.81 8.11 -51.93 -0.42 0.38 16 29 H 0.26 6.92 8.32 -40.82 -0.34 6.58 16 30 H 0.07 1.37 7.14 -51.93 -0.37 1.00 16 31 H 0.08 1.74 8.14 -51.93 -0.42 1.31 16 32 H 0.08 1.54 8.14 -51.92 -0.42 1.12 16 33 H 0.07 1.31 8.14 -51.93 -0.42 0.89 16 34 H 0.13 2.82 7.02 -52.49 -0.37 2.45 16 LS Contribution 297.74 15.07 4.49 4.49 Total: -1.00 -27.02 297.74 -7.64 -34.66 By element: Atomic # 1 Polarization: 6.47 SS G_CDS: -4.21 Total: 2.26 kcal Atomic # 6 Polarization: -23.31 SS G_CDS: -1.84 Total: -25.14 kcal Atomic # 7 Polarization: -22.85 SS G_CDS: 0.62 Total: -22.23 kcal Atomic # 8 Polarization: -5.67 SS G_CDS: -0.19 Total: -5.86 kcal Atomic # 14 Polarization: 20.05 SS G_CDS: -5.02 Total: 15.03 kcal Atomic # 17 Polarization: -1.73 SS G_CDS: -1.48 Total: -3.21 kcal Total LS contribution 4.49 Total: 4.49 kcal Total: -27.02 -7.64 -34.66 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260507507.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 34.692 kcal (2) G-P(sol) polarization free energy of solvation -27.023 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 7.669 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.641 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.664 kcal (6) G-S(sol) free energy of system = (1) + (5) 0.028 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.38 seconds