Wall clock time and date at job start Mon Mar 30 2020 06:50:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50708 * 1 3 3 C 1.38047 * 119.77191 * 2 1 4 4 C 1.38256 * 120.02080 * 179.97438 * 3 2 1 5 5 C 1.38081 * 119.83459 * 0.12713 * 4 3 2 6 6 Cl 1.73600 * 119.89615 * 180.02562 * 5 4 3 7 7 C 1.39264 * 120.20841 * 359.97438 * 5 4 3 8 8 C 1.38115 * 119.87873 * 359.75741 * 7 5 4 9 9 C 1.50665 * 122.25273 * 180.42873 * 8 7 5 10 10 H 1.09004 * 109.20899 * 268.96988 * 9 8 7 11 11 C 1.50705 * 109.21182 * 149.65365 * 9 8 7 12 12 H 1.07991 * 119.99777 * 323.19056 * 11 9 8 13 13 C 1.37876 * 119.99919 * 143.19080 * 11 9 8 14 14 N 1.31512 * 119.99957 * 0.02562 * 13 11 9 15 15 Si 1.86795 * 119.99852 * 179.97438 * 13 11 9 16 16 H 1.48498 * 109.47281 * 359.97438 * 15 13 11 17 17 H 1.48502 * 109.47291 * 120.00319 * 15 13 11 18 18 H 1.48501 * 109.47300 * 240.00044 * 15 13 11 19 19 C 1.52835 * 110.81341 * 29.30986 * 9 8 7 20 20 C 1.53472 * 108.86186 * 269.81487 * 19 9 8 21 21 C 1.53304 * 108.11746 * 58.66284 * 20 19 9 22 22 O 1.35695 * 118.25921 * 179.55716 * 7 5 4 23 23 H 1.08995 * 109.47431 * 263.45003 * 1 2 3 24 24 H 1.09006 * 109.47088 * 23.45435 * 1 2 3 25 25 H 1.09010 * 109.46671 * 143.44670 * 1 2 3 26 26 H 1.08006 * 119.99001 * 359.93607 * 3 2 1 27 27 H 1.07995 * 120.07959 * 180.14997 * 4 3 2 28 28 H 0.97008 * 120.00022 * 180.02562 * 14 13 11 29 29 H 1.08996 * 109.57446 * 150.00162 * 19 9 8 30 30 H 1.08999 * 109.67362 * 29.68693 * 19 9 8 31 31 H 1.09000 * 109.73510 * 299.00700 * 20 19 9 32 32 H 1.09001 * 109.73462 * 178.31686 * 20 19 9 33 33 H 1.09006 * 109.76838 * 151.78200 * 21 20 19 34 34 H 1.08996 * 109.77005 * 272.52117 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.1925 1.1983 0.0000 4 6 3.5751 1.2043 0.0005 5 6 4.2672 0.0095 -0.0016 6 17 6.0032 0.0151 -0.0002 7 6 3.5771 -1.2001 -0.0037 8 6 2.1959 -1.2043 0.0013 9 6 1.3957 -2.4808 0.0089 10 1 1.1858 -2.7786 -1.0185 11 6 0.0944 -2.2461 0.7318 12 1 0.0657 -1.5982 1.5953 13 6 -1.0594 -2.8587 0.2908 14 7 -1.0242 -3.6482 -0.7604 15 14 -2.6722 -2.5683 1.1873 16 1 -2.4446 -1.6480 2.3303 17 1 -3.6561 -1.9644 0.2532 18 1 -3.1982 -3.8623 1.6916 19 6 2.1654 -3.6001 0.7095 20 6 3.0094 -4.3485 -0.3311 21 6 3.9577 -3.3403 -0.9902 22 8 4.2968 -2.3505 -0.0150 23 1 -0.3634 -0.1172 1.0209 24 1 -0.3633 0.9428 -0.4091 25 1 -0.3633 -0.8256 -0.6121 26 1 1.6486 2.1314 -0.0010 27 1 4.1123 2.1411 0.0030 28 1 -1.8361 -4.0789 -1.0709 29 1 1.4623 -4.2910 1.1747 30 1 2.8183 -3.1750 1.4718 31 1 2.3578 -4.7887 -1.0859 32 1 3.5878 -5.1319 0.1587 33 1 4.8604 -3.8495 -1.3279 34 1 3.4619 -2.8677 -1.8381 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261244494.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:50:45 Heat of formation + Delta-G solvation = -18.589850 kcal Electronic energy + Delta-G solvation = -18816.101718 eV Core-core repulsion = 15933.060809 eV Total energy + Delta-G solvation = -2883.040910 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 266.081 amu Computer time = 0.41 seconds Orbital eigenvalues (eV) -40.11838 -37.27145 -36.20301 -34.90712 -32.23169 -31.33899 -30.62591 -27.19985 -26.34730 -25.21731 -22.97436 -20.80223 -20.53945 -19.61593 -16.91823 -16.53233 -15.93655 -15.46010 -14.94084 -14.64285 -13.91842 -13.39813 -13.29811 -12.82941 -12.68769 -12.36726 -12.18893 -11.83371 -11.36281 -11.20834 -11.01673 -10.88781 -10.66648 -10.58843 -10.47326 -10.42804 -10.15739 -9.90075 -9.62984 -9.16772 -9.07860 -8.45343 -7.67418 -7.63886 -6.16251 -4.06418 1.75038 1.88561 2.66297 3.20039 3.30420 3.32884 3.90883 4.28434 4.38922 5.11499 5.32944 5.50890 5.61953 5.66805 5.77216 5.81963 5.87373 5.99412 6.26151 6.30200 6.39757 6.56939 6.62407 6.68967 6.82915 6.86914 7.00994 7.06938 7.13487 7.30015 7.53735 7.65549 7.73797 7.77072 8.06998 8.24825 8.85063 9.41136 10.92243 Molecular weight = 266.08amu Principal moments of inertia in cm(-1) A = 0.024914 B = 0.007783 C = 0.006236 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1123.618856 B = 3596.551468 C = 4489.088059 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.103 4.103 2 C -0.034 4.034 3 C -0.144 4.144 4 C -0.111 4.111 5 C -0.071 4.071 6 Cl -0.084 7.084 7 C 0.111 3.889 8 C -0.085 4.085 9 C 0.065 3.935 10 H 0.076 0.924 11 C -0.499 4.499 12 H 0.064 0.936 13 C 0.060 3.940 14 N -0.889 5.889 15 Si 0.883 3.117 16 H -0.271 1.271 17 H -0.282 1.282 18 H -0.284 1.284 19 C -0.099 4.099 20 C -0.147 4.147 21 C 0.068 3.932 22 O -0.318 6.318 23 H 0.076 0.924 24 H 0.021 0.979 25 H 0.110 0.890 26 H 0.122 0.878 27 H 0.125 0.875 28 H 0.262 0.738 29 H 0.063 0.937 30 H 0.047 0.953 31 H 0.073 0.927 32 H 0.053 0.947 33 H 0.085 0.915 34 H 0.058 0.942 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.877 4.713 -0.843 8.380 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.159 4.159 2 C -0.034 4.034 3 C -0.163 4.163 4 C -0.130 4.130 5 C -0.098 4.098 6 Cl -0.056 7.056 7 C 0.066 3.934 8 C -0.086 4.086 9 C 0.047 3.953 10 H 0.093 0.907 11 C -0.537 4.537 12 H 0.082 0.918 13 C -0.142 4.142 14 N -0.528 5.528 15 Si 0.711 3.289 16 H -0.195 1.195 17 H -0.208 1.208 18 H -0.210 1.210 19 C -0.137 4.137 20 C -0.185 4.185 21 C -0.007 4.007 22 O -0.234 6.234 23 H 0.095 0.905 24 H 0.040 0.960 25 H 0.128 0.872 26 H 0.140 0.860 27 H 0.143 0.857 28 H 0.072 0.928 29 H 0.082 0.918 30 H 0.066 0.934 31 H 0.092 0.908 32 H 0.071 0.929 33 H 0.103 0.897 34 H 0.076 0.924 Dipole moment (debyes) X Y Z Total from point charges 7.056 4.537 -0.842 8.431 hybrid contribution -0.830 0.088 0.367 0.912 sum 6.226 4.625 -0.474 7.770 Atomic orbital electron populations 1.21426 0.90011 1.00521 1.03939 1.20064 0.97508 0.91115 0.94740 1.20909 0.92978 0.98023 1.04345 1.20634 0.94195 0.95597 1.02532 1.20804 0.83526 0.93715 1.11714 1.98299 1.11023 1.98945 1.97318 1.18349 0.89567 0.84612 1.00902 1.20967 0.90805 0.98866 0.97997 1.18031 0.91923 0.85999 0.99341 0.90675 1.21063 0.91701 1.28058 1.12855 0.91768 1.24856 0.98791 0.95536 0.94969 1.69899 1.28444 1.30404 1.24018 0.86650 0.83968 0.78256 0.80022 1.19506 1.20779 1.20960 1.21783 0.96775 0.98204 0.96955 1.22385 0.98042 0.97734 1.00323 1.22977 0.98876 0.88724 0.90121 1.85912 1.57393 1.25234 1.54858 0.90544 0.96019 0.87207 0.86012 0.85744 0.92756 0.91786 0.93437 0.90840 0.92856 0.89731 0.92355 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -2.06 7.94 36.01 0.29 -1.78 16 2 C -0.03 -0.68 5.73 -104.50 -0.60 -1.28 16 3 C -0.14 -2.47 9.65 -39.64 -0.38 -2.85 16 4 C -0.11 -1.84 9.82 -39.63 -0.39 -2.22 16 5 C -0.07 -1.29 6.34 -39.26 -0.25 -1.54 16 6 Cl -0.08 -1.38 28.39 -51.86 -1.47 -2.85 16 7 C 0.11 2.23 5.62 -39.25 -0.22 2.01 16 8 C -0.09 -1.82 5.28 -104.50 -0.55 -2.37 16 9 C 0.07 1.50 1.63 -93.02 -0.15 1.34 16 10 H 0.08 1.91 6.88 -51.93 -0.36 1.55 16 11 C -0.50 -12.13 4.15 -34.44 -0.14 -12.27 16 12 H 0.06 1.59 5.98 -52.49 -0.31 1.27 16 13 C 0.06 1.50 4.54 -17.82 -0.08 1.42 16 14 N -0.89 -23.37 12.76 55.43 0.71 -22.66 16 15 Si 0.88 19.67 29.54 -169.99 -5.02 14.65 16 16 H -0.27 -5.94 7.11 56.52 0.40 -5.54 16 17 H -0.28 -6.25 7.11 56.52 0.40 -5.85 16 18 H -0.28 -6.43 7.11 56.52 0.40 -6.03 16 19 C -0.10 -2.14 5.11 -26.57 -0.14 -2.28 16 20 C -0.15 -2.70 6.04 -26.33 -0.16 -2.86 16 21 C 0.07 1.17 6.52 37.31 0.24 1.41 16 22 O -0.32 -6.21 8.21 -18.79 -0.15 -6.36 16 23 H 0.08 1.57 6.14 -51.93 -0.32 1.25 16 24 H 0.02 0.37 8.03 -51.93 -0.42 -0.05 16 25 H 0.11 2.49 5.24 -51.92 -0.27 2.22 16 26 H 0.12 1.76 8.05 -52.48 -0.42 1.33 16 27 H 0.12 1.71 8.06 -52.49 -0.42 1.29 16 28 H 0.26 6.65 8.31 -40.82 -0.34 6.31 16 29 H 0.06 1.48 7.82 -51.93 -0.41 1.07 16 30 H 0.05 1.04 6.81 -51.93 -0.35 0.69 16 31 H 0.07 1.39 8.11 -51.93 -0.42 0.97 16 32 H 0.05 0.88 8.14 -51.93 -0.42 0.46 16 33 H 0.08 1.22 8.14 -51.93 -0.42 0.80 16 34 H 0.06 1.03 7.77 -51.93 -0.40 0.62 16 LS Contribution 282.08 15.07 4.25 4.25 Total: -1.00 -25.57 282.08 -8.31 -33.88 By element: Atomic # 1 Polarization: 6.45 SS G_CDS: -4.09 Total: 2.36 kcal Atomic # 6 Polarization: -20.73 SS G_CDS: -2.53 Total: -23.27 kcal Atomic # 7 Polarization: -23.37 SS G_CDS: 0.71 Total: -22.66 kcal Atomic # 8 Polarization: -6.21 SS G_CDS: -0.15 Total: -6.36 kcal Atomic # 14 Polarization: 19.67 SS G_CDS: -5.02 Total: 14.65 kcal Atomic # 17 Polarization: -1.38 SS G_CDS: -1.47 Total: -2.85 kcal Total LS contribution 4.25 Total: 4.25 kcal Total: -25.57 -8.31 -33.88 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261244494.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 15.292 kcal (2) G-P(sol) polarization free energy of solvation -25.570 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -10.278 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.312 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.882 kcal (6) G-S(sol) free energy of system = (1) + (5) -18.590 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.41 seconds