Wall clock time and date at job start Mon Mar 30 2020 06:50:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.38208 * 120.15859 * 2 1 4 4 C 1.38344 * 120.21693 * 179.90333 * 3 2 1 5 5 Cl 1.73595 * 119.97994 * 180.47518 * 4 3 2 6 6 C 1.38532 * 120.04438 * 0.45041 * 4 3 2 7 7 C 1.37986 * 119.63236 * 0.08171 * 6 4 3 8 8 C 1.37979 * 120.53948 * 358.99963 * 7 6 4 9 9 O 1.36183 * 120.32844 * 181.55608 * 8 7 6 10 10 C 1.43132 * 115.61349 * 70.23317 * 9 8 7 11 11 C 1.51428 * 110.95156 * 273.21553 * 10 9 8 12 12 C 1.52142 * 113.45391 * 65.49108 * 11 10 9 13 13 C 1.51655 * 119.98222 * 177.74863 * 7 6 4 14 14 H 1.08994 * 109.60078 * 352.68135 * 13 7 6 15 15 C 1.50698 * 109.59735 * 232.20799 * 13 7 6 16 16 H 1.08003 * 120.00234 * 335.11639 * 15 13 7 17 17 C 1.37884 * 119.99961 * 155.10825 * 15 13 7 18 18 N 1.31509 * 119.99606 * 0.02562 * 17 15 13 19 19 Si 1.86796 * 120.00078 * 180.02562 * 17 15 13 20 20 H 1.48502 * 109.47206 * 0.02562 * 19 17 15 21 21 H 1.48502 * 109.46989 * 120.00306 * 19 17 15 22 22 H 1.48495 * 109.47169 * 239.99987 * 19 17 15 23 23 H 1.08994 * 109.47074 * 270.02740 * 1 2 3 24 24 H 1.08997 * 109.46481 * 30.02103 * 1 2 3 25 25 H 1.08997 * 109.46888 * 150.01995 * 1 2 3 26 26 H 1.08009 * 119.89423 * 359.92797 * 3 2 1 27 27 H 1.08008 * 120.18452 * 180.08196 * 6 4 3 28 28 H 1.09005 * 109.18139 * 33.59478 * 10 9 8 29 29 H 1.08997 * 109.18264 * 152.83965 * 10 9 8 30 30 H 1.08996 * 108.68437 * 186.51715 * 11 10 9 31 31 H 1.08996 * 108.68783 * 304.46708 * 11 10 9 32 32 H 1.09002 * 109.20965 * 172.14598 * 12 11 10 33 33 H 1.09001 * 109.17727 * 52.79894 * 12 11 10 34 34 H 0.97003 * 120.00159 * 179.97438 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2014 1.1950 0.0000 4 6 3.5848 1.1964 0.0020 5 17 4.4507 2.7009 0.0145 6 6 4.2796 -0.0020 -0.0054 7 6 3.5842 -1.1938 -0.0165 8 6 2.2045 -1.2006 0.0005 9 8 1.5229 -2.3794 0.0214 10 6 1.6060 -3.1206 1.2431 11 6 2.8280 -4.0149 1.2518 12 6 4.1409 -3.2461 1.2492 13 6 4.3361 -2.5095 -0.0762 14 1 5.3971 -2.3173 -0.2350 15 6 3.7966 -3.3491 -1.2053 16 1 2.7862 -3.1980 -1.5557 17 6 4.5930 -4.3102 -1.7913 18 7 5.8231 -4.4943 -1.3645 19 14 3.9245 -5.3505 -3.1914 20 1 2.5245 -4.9491 -3.4817 21 1 4.7590 -5.1455 -4.4025 22 1 3.9588 -6.7834 -2.8034 23 1 -0.3633 0.0005 1.0276 24 1 -0.3632 0.8898 -0.5142 25 1 -0.3633 -0.8901 -0.5135 26 1 1.6622 2.1309 -0.0012 27 1 5.3597 -0.0036 -0.0025 28 1 1.6649 -2.4254 2.0805 29 1 0.7120 -3.7348 1.3508 30 1 2.7936 -4.6443 2.1410 31 1 2.7974 -4.6567 0.3715 32 1 4.9653 -3.9439 1.3964 33 1 4.1337 -2.5223 2.0642 34 1 6.3833 -5.1706 -1.7764 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261251947.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:50:51 Heat of formation + Delta-G solvation = -35.906909 kcal Electronic energy + Delta-G solvation = -18627.679027 eV Core-core repulsion = 15743.887193 eV Total energy + Delta-G solvation = -2883.791834 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 266.081 amu Computer time = 0.37 seconds Orbital eigenvalues (eV) -40.03432 -37.22404 -35.86259 -35.01319 -32.18279 -31.71249 -30.45475 -27.09908 -26.49618 -25.05996 -23.58420 -21.13574 -20.58991 -19.18575 -17.29474 -16.39470 -15.73696 -15.14452 -14.78587 -14.50985 -13.88704 -13.53492 -13.28277 -12.87031 -12.55712 -12.52324 -12.37235 -12.16169 -11.93814 -11.62432 -11.33896 -10.99441 -10.89634 -10.65294 -10.52321 -10.32151 -10.09445 -9.73837 -9.29298 -9.20574 -8.84639 -8.43936 -8.09491 -7.69085 -6.04165 -4.02478 1.59547 1.82776 2.50920 3.29358 3.38306 3.44610 3.92391 4.43610 4.52816 5.19659 5.25917 5.34182 5.52929 5.61760 5.76628 5.80999 5.85588 5.91398 5.94093 6.03031 6.21154 6.29229 6.44924 6.54190 6.60453 6.68325 6.82791 7.04499 7.08727 7.15646 7.37600 7.54931 7.71866 7.96121 8.18022 8.38267 9.05650 9.58444 11.06013 Molecular weight = 266.08amu Principal moments of inertia in cm(-1) A = 0.019309 B = 0.007488 C = 0.006538 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1449.779487 B = 3738.619344 C = 4281.474856 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.102 4.102 2 C -0.101 4.101 3 C -0.124 4.124 4 C -0.041 4.041 5 Cl -0.092 7.092 6 C -0.109 4.109 7 C -0.054 4.054 8 C 0.113 3.887 9 O -0.310 6.310 10 C 0.078 3.922 11 C -0.142 4.142 12 C -0.097 4.097 13 C 0.073 3.927 14 H 0.060 0.940 15 C -0.491 4.491 16 H 0.074 0.926 17 C 0.060 3.940 18 N -0.895 5.895 19 Si 0.888 3.112 20 H -0.271 1.271 21 H -0.285 1.285 22 H -0.285 1.285 23 H 0.063 0.937 24 H 0.061 0.939 25 H 0.074 0.926 26 H 0.125 0.875 27 H 0.130 0.870 28 H 0.039 0.961 29 H 0.082 0.918 30 H 0.044 0.956 31 H 0.093 0.907 32 H 0.062 0.938 33 H 0.022 0.978 34 H 0.259 0.741 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.040 7.611 5.381 11.681 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.159 4.159 2 C -0.102 4.102 3 C -0.143 4.143 4 C -0.067 4.067 5 Cl -0.063 7.063 6 C -0.128 4.128 7 C -0.055 4.055 8 C 0.069 3.931 9 O -0.226 6.226 10 C 0.004 3.996 11 C -0.179 4.179 12 C -0.135 4.135 13 C 0.055 3.945 14 H 0.078 0.922 15 C -0.529 4.529 16 H 0.092 0.908 17 C -0.141 4.141 18 N -0.534 5.534 19 Si 0.716 3.284 20 H -0.195 1.195 21 H -0.212 1.212 22 H -0.211 1.211 23 H 0.082 0.918 24 H 0.080 0.920 25 H 0.093 0.907 26 H 0.143 0.857 27 H 0.148 0.852 28 H 0.057 0.943 29 H 0.100 0.900 30 H 0.062 0.938 31 H 0.112 0.888 32 H 0.081 0.919 33 H 0.041 0.959 34 H 0.069 0.931 Dipole moment (debyes) X Y Z Total from point charges -6.923 7.535 5.204 11.479 hybrid contribution 0.116 -0.417 -0.652 0.783 sum -6.807 7.118 4.552 10.850 Atomic orbital electron populations 1.20583 0.90754 1.02762 1.01812 1.19935 0.96340 0.91597 1.02355 1.20501 0.91652 0.97585 1.04533 1.20861 0.92144 0.86230 1.07502 1.98317 1.77361 1.33380 1.97235 1.20904 1.00274 0.89760 1.01891 1.21113 0.93546 0.97449 0.93392 1.18322 0.89800 0.85208 0.99774 1.86262 1.69703 1.30753 1.35856 1.22360 0.98847 0.93729 0.84701 1.21575 0.94721 0.99340 1.02277 1.21330 0.96549 0.98265 0.97397 1.18228 0.96303 0.86313 0.93664 0.92197 1.21231 0.99611 1.16459 1.15627 0.90835 1.24973 0.94771 0.97581 0.96794 1.69943 1.07333 1.33946 1.42143 0.86577 0.79375 0.80069 0.82363 1.19507 1.21165 1.21141 0.91794 0.92050 0.90728 0.85711 0.85211 0.94300 0.89962 0.93775 0.88831 0.91925 0.95947 0.93079 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -1.39 9.79 36.01 0.35 -1.04 16 2 C -0.10 -1.73 5.90 -104.40 -0.62 -2.34 16 3 C -0.12 -1.99 9.48 -39.55 -0.37 -2.37 16 4 C -0.04 -0.70 6.32 -39.43 -0.25 -0.95 16 5 Cl -0.09 -1.37 28.95 -51.86 -1.50 -2.88 16 6 C -0.11 -2.11 9.48 -39.57 -0.37 -2.49 16 7 C -0.05 -1.15 4.64 -104.34 -0.48 -1.63 16 8 C 0.11 2.25 5.21 -39.45 -0.21 2.05 16 9 O -0.31 -6.22 7.21 -20.32 -0.15 -6.37 16 10 C 0.08 1.36 6.48 36.36 0.24 1.60 16 11 C -0.14 -2.76 5.29 -27.96 -0.15 -2.90 16 12 C -0.10 -2.09 5.44 -27.23 -0.15 -2.24 16 13 C 0.07 1.75 2.38 -92.51 -0.22 1.53 16 14 H 0.06 1.57 7.40 -51.93 -0.38 1.19 16 15 C -0.49 -12.82 5.56 -34.44 -0.19 -13.01 16 16 H 0.07 1.99 6.02 -52.48 -0.32 1.67 16 17 C 0.06 1.61 5.46 -17.82 -0.10 1.51 16 18 N -0.89 -25.00 12.96 55.43 0.72 -24.28 16 19 Si 0.89 21.15 29.54 -169.99 -5.02 16.13 16 20 H -0.27 -6.44 7.11 56.52 0.40 -6.04 16 21 H -0.29 -6.85 7.11 56.52 0.40 -6.44 16 22 H -0.29 -6.73 7.11 56.52 0.40 -6.33 16 23 H 0.06 0.77 8.14 -51.93 -0.42 0.34 16 24 H 0.06 0.71 8.09 -51.93 -0.42 0.29 16 25 H 0.07 1.06 7.55 -51.93 -0.39 0.67 16 26 H 0.12 1.68 8.06 -52.48 -0.42 1.26 16 27 H 0.13 2.43 7.98 -52.48 -0.42 2.01 16 28 H 0.04 0.63 7.90 -51.93 -0.41 0.22 16 29 H 0.08 1.21 8.14 -51.93 -0.42 0.78 16 30 H 0.04 0.74 8.14 -51.93 -0.42 0.32 16 31 H 0.09 2.08 6.51 -51.93 -0.34 1.74 16 32 H 0.06 1.44 8.14 -51.93 -0.42 1.01 16 33 H 0.02 0.44 7.90 -51.93 -0.41 0.03 16 34 H 0.26 6.97 8.31 -40.82 -0.34 6.63 16 LS Contribution 289.69 15.07 4.37 4.37 Total: -1.00 -27.51 289.69 -8.44 -35.96 By element: Atomic # 1 Polarization: 3.71 SS G_CDS: -4.34 Total: -0.63 kcal Atomic # 6 Polarization: -19.78 SS G_CDS: -2.52 Total: -22.30 kcal Atomic # 7 Polarization: -25.00 SS G_CDS: 0.72 Total: -24.28 kcal Atomic # 8 Polarization: -6.22 SS G_CDS: -0.15 Total: -6.37 kcal Atomic # 14 Polarization: 21.15 SS G_CDS: -5.02 Total: 16.13 kcal Atomic # 17 Polarization: -1.37 SS G_CDS: -1.50 Total: -2.88 kcal Total LS contribution 4.37 Total: 4.37 kcal Total: -27.51 -8.44 -35.96 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261251947.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 0.049 kcal (2) G-P(sol) polarization free energy of solvation -27.511 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -27.462 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.445 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.956 kcal (6) G-S(sol) free energy of system = (1) + (5) -35.907 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds