Wall clock time and date at job start Mon Mar 30 2020 06:49:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.38014 * 120.02496 * 2 1 4 4 C 1.39095 * 120.23353 * 180.02562 * 3 2 1 5 5 C 1.38413 * 119.71439 * 0.16399 * 4 3 2 6 6 C 1.38461 * 119.84311 * 359.80047 * 5 4 3 7 7 C 1.50702 * 119.84428 * 180.11766 * 6 5 4 8 8 C 1.38249 * 120.30681 * 0.10118 * 6 5 4 9 9 Cl 1.73600 * 120.01912 * 180.02562 * 8 6 5 10 10 C 1.50777 * 121.40248 * 179.76221 * 5 4 3 11 11 C 1.53078 * 109.67717 * 17.72284 * 10 5 4 12 12 H 1.09000 * 109.73079 * 71.50192 * 11 10 5 13 13 C 1.50696 * 109.69747 * 192.08737 * 11 10 5 14 14 H 1.07994 * 120.00437 * 358.83483 * 13 11 10 15 15 C 1.37879 * 119.99749 * 178.83724 * 13 11 10 16 16 N 1.31514 * 120.00117 * 359.97438 * 15 13 11 17 17 Si 1.86801 * 120.00194 * 180.02562 * 15 13 11 18 18 H 1.48501 * 109.46702 * 359.97438 * 17 15 13 19 19 H 1.48496 * 109.47201 * 119.99801 * 17 15 13 20 20 H 1.48499 * 109.47096 * 239.99983 * 17 15 13 21 21 C 1.53405 * 108.28999 * 311.78652 * 11 10 5 22 22 O 1.35870 * 118.48703 * 180.21943 * 4 3 2 23 23 H 1.09004 * 109.46815 * 269.96885 * 1 2 3 24 24 H 1.08995 * 109.47405 * 29.96996 * 1 2 3 25 25 H 1.09000 * 109.47368 * 149.97564 * 1 2 3 26 26 H 1.08005 * 119.88351 * 0.05398 * 3 2 1 27 27 H 1.09000 * 109.46965 * 90.00256 * 7 6 5 28 28 H 1.09004 * 109.47289 * 210.00164 * 7 6 5 29 29 H 1.08999 * 109.47209 * 330.00239 * 7 6 5 30 30 H 1.08997 * 109.43671 * 257.66168 * 10 5 4 31 31 H 1.08993 * 109.43426 * 137.78895 * 10 5 4 32 32 H 0.96999 * 120.00132 * 180.02562 * 16 15 13 33 33 H 1.08997 * 109.68497 * 305.04138 * 21 11 10 34 34 H 1.09002 * 109.68505 * 184.48026 * 21 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1976 1.1949 0.0000 4 6 3.5885 1.2000 -0.0005 5 6 4.2790 0.0004 -0.0045 6 6 3.5818 -1.1959 -0.0037 7 6 4.3335 -2.5020 -0.0054 8 6 2.1993 -1.1977 -0.0011 9 17 1.3327 -2.7019 0.0005 10 6 5.7862 -0.0385 -0.0106 11 6 6.3387 1.3202 0.4274 12 1 6.1640 1.4621 1.4939 13 6 7.8170 1.3834 0.1419 14 1 8.3204 0.5315 -0.2906 15 6 8.5270 2.5289 0.4331 16 7 7.9140 3.5666 0.9594 17 14 10.3594 2.6076 0.0786 18 1 10.8054 1.3190 -0.5095 19 1 10.6315 3.7098 -0.8786 20 1 11.0978 2.8562 1.3428 21 6 5.6117 2.4138 -0.3656 22 8 4.2322 2.3965 0.0041 23 1 -0.3633 -0.0006 1.0277 24 1 -0.3634 0.8902 -0.5133 25 1 -0.3634 -0.8898 -0.5142 26 1 1.6560 2.1294 0.0009 27 1 4.5164 -2.8173 1.0219 28 1 3.7426 -3.2608 -0.5185 29 1 5.2853 -2.3728 -0.5207 30 1 6.1391 -0.2664 -1.0163 31 1 6.1318 -0.8096 0.6778 32 1 8.4133 4.3726 1.1639 33 1 5.7079 2.2184 -1.4336 34 1 6.0428 3.3867 -0.1296 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261263226.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:49:26 Heat of formation + Delta-G solvation = -46.558822 kcal Electronic energy + Delta-G solvation = -18048.327475 eV Core-core repulsion = 15164.073740 eV Total energy + Delta-G solvation = -2884.253735 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 266.081 amu Computer time = 0.37 seconds Orbital eigenvalues (eV) -40.18422 -37.64005 -35.91887 -34.73871 -33.37200 -31.09161 -30.48635 -27.52737 -26.69934 -24.94990 -24.05821 -22.06213 -20.56934 -18.91432 -16.88843 -16.45580 -16.16624 -15.56386 -14.64053 -14.49115 -13.80623 -13.50479 -13.38692 -13.23971 -12.85697 -12.77404 -12.59284 -12.28560 -11.94398 -11.82189 -11.60556 -11.48151 -11.08421 -11.00325 -10.72393 -10.50505 -10.29671 -10.09940 -9.71209 -9.46614 -8.99858 -8.56985 -8.15968 -7.48529 -6.21279 -4.28476 1.56462 1.63900 2.45388 3.19736 3.28661 3.31997 3.89243 4.17027 4.31310 4.93883 5.03472 5.09921 5.37322 5.50187 5.51734 5.68330 5.70027 5.82215 5.84749 6.01151 6.07614 6.17588 6.21905 6.38720 6.48267 6.54276 6.58769 6.65613 6.78786 7.00476 7.07614 7.38658 7.58207 7.76848 8.07027 8.33131 8.75746 9.38178 10.86041 Molecular weight = 266.08amu Principal moments of inertia in cm(-1) A = 0.035768 B = 0.005184 C = 0.004595 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 782.642046 B = 5399.821291 C = 6092.341983 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.112 4.112 2 C -0.051 4.051 3 C -0.161 4.161 4 C 0.161 3.839 5 C -0.148 4.148 6 C -0.042 4.042 7 C -0.118 4.118 8 C -0.083 4.083 9 Cl -0.086 7.086 10 C -0.070 4.070 11 C 0.016 3.984 12 H 0.041 0.959 13 C -0.516 4.516 14 H 0.063 0.937 15 C 0.061 3.939 16 N -0.891 5.891 17 Si 0.898 3.102 18 H -0.272 1.272 19 H -0.282 1.282 20 H -0.282 1.282 21 C 0.059 3.941 22 O -0.322 6.322 23 H 0.071 0.929 24 H 0.068 0.932 25 H 0.070 0.930 26 H 0.132 0.868 27 H 0.073 0.927 28 H 0.068 0.932 29 H 0.074 0.926 30 H 0.069 0.931 31 H 0.069 0.931 32 H 0.265 0.735 33 H 0.039 0.961 34 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.892 -7.682 -2.354 13.535 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.169 4.169 2 C -0.052 4.052 3 C -0.180 4.180 4 C 0.114 3.886 5 C -0.149 4.149 6 C -0.043 4.043 7 C -0.175 4.175 8 C -0.109 4.109 9 Cl -0.057 7.057 10 C -0.107 4.107 11 C -0.002 4.002 12 H 0.059 0.941 13 C -0.554 4.554 14 H 0.081 0.919 15 C -0.141 4.141 16 N -0.529 5.529 17 Si 0.726 3.274 18 H -0.196 1.196 19 H -0.208 1.208 20 H -0.208 1.208 21 C -0.015 4.015 22 O -0.235 6.235 23 H 0.090 0.910 24 H 0.086 0.914 25 H 0.089 0.911 26 H 0.150 0.850 27 H 0.092 0.908 28 H 0.087 0.913 29 H 0.093 0.907 30 H 0.087 0.913 31 H 0.088 0.912 32 H 0.075 0.925 33 H 0.057 0.943 34 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges -10.979 -7.435 -2.251 13.450 hybrid contribution 1.121 -0.072 -0.156 1.134 sum -9.859 -7.508 -2.407 12.623 Atomic orbital electron populations 1.20792 0.90592 1.02975 1.02548 1.19295 0.96008 0.90699 0.99191 1.20313 0.91429 0.97591 1.08670 1.18898 0.91237 0.85743 0.92708 1.20048 0.97810 0.91018 1.05992 1.19452 0.91102 0.95577 0.98187 1.20874 1.00341 0.93535 1.02706 1.20293 0.91336 0.85769 1.13523 1.98285 1.76842 1.33241 1.97364 1.20687 0.87446 1.01093 1.01425 1.19315 0.95404 0.88840 0.96670 0.94115 1.21078 0.92085 1.00041 1.42165 0.91886 1.25047 0.98919 0.95643 0.94470 1.69813 1.36145 1.04193 1.42743 0.86426 0.84698 0.78201 0.78106 1.19619 1.20822 1.20824 1.23686 0.74372 1.06301 0.97142 1.85999 1.28664 1.26454 1.82432 0.90990 0.91352 0.91105 0.85033 0.90830 0.91271 0.90713 0.91304 0.91217 0.92473 0.94265 0.84496 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.31 9.62 36.00 0.35 -0.97 16 2 C -0.05 -0.78 5.88 -104.67 -0.62 -1.40 16 3 C -0.16 -2.75 9.59 -39.35 -0.38 -3.13 16 4 C 0.16 3.24 6.47 -39.20 -0.25 2.99 16 5 C -0.15 -2.86 5.75 -104.44 -0.60 -3.46 16 6 C -0.04 -0.72 5.88 -104.53 -0.62 -1.33 16 7 C -0.12 -1.68 8.81 36.01 0.32 -1.36 16 8 C -0.08 -1.31 6.31 -39.54 -0.25 -1.56 16 9 Cl -0.09 -1.15 25.62 -51.86 -1.33 -2.48 16 10 C -0.07 -1.43 3.92 -27.81 -0.11 -1.53 16 11 C 0.02 0.39 2.33 -91.52 -0.21 0.18 16 12 H 0.04 1.10 8.14 -51.93 -0.42 0.68 16 13 C -0.52 -13.35 8.55 -34.44 -0.29 -13.65 16 14 H 0.06 1.60 7.75 -52.49 -0.41 1.19 16 15 C 0.06 1.60 5.30 -17.82 -0.09 1.51 16 16 N -0.89 -24.23 11.32 55.43 0.63 -23.61 16 17 Si 0.90 20.23 29.54 -169.99 -5.02 15.21 16 18 H -0.27 -6.03 7.11 56.52 0.40 -5.63 16 19 H -0.28 -6.32 7.11 56.52 0.40 -5.92 16 20 H -0.28 -6.38 7.11 56.52 0.40 -5.97 16 21 C 0.06 1.38 6.14 37.37 0.23 1.61 16 22 O -0.32 -7.20 10.27 -19.33 -0.20 -7.40 16 23 H 0.07 0.77 8.14 -51.93 -0.42 0.35 16 24 H 0.07 0.70 8.08 -51.93 -0.42 0.28 16 25 H 0.07 0.78 6.91 -51.93 -0.36 0.42 16 26 H 0.13 2.01 8.06 -52.48 -0.42 1.58 16 27 H 0.07 0.99 8.14 -51.93 -0.42 0.56 16 28 H 0.07 0.89 6.89 -51.93 -0.36 0.53 16 29 H 0.07 1.04 6.81 -51.93 -0.35 0.69 16 30 H 0.07 1.38 8.08 -51.93 -0.42 0.96 16 31 H 0.07 1.35 7.29 -51.93 -0.38 0.98 16 32 H 0.27 6.86 8.31 -40.82 -0.34 6.52 16 33 H 0.04 0.89 8.14 -51.93 -0.42 0.47 16 34 H 0.14 3.52 6.02 -51.93 -0.31 3.21 16 LS Contribution 289.37 15.07 4.36 4.36 Total: -1.00 -26.77 289.37 -8.35 -35.12 By element: Atomic # 1 Polarization: 5.15 SS G_CDS: -4.26 Total: 0.89 kcal Atomic # 6 Polarization: -19.57 SS G_CDS: -2.53 Total: -22.10 kcal Atomic # 7 Polarization: -24.23 SS G_CDS: 0.63 Total: -23.61 kcal Atomic # 8 Polarization: -7.20 SS G_CDS: -0.20 Total: -7.40 kcal Atomic # 14 Polarization: 20.23 SS G_CDS: -5.02 Total: 15.21 kcal Atomic # 17 Polarization: -1.15 SS G_CDS: -1.33 Total: -2.48 kcal Total LS contribution 4.36 Total: 4.36 kcal Total: -26.77 -8.35 -35.12 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261263226.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -11.439 kcal (2) G-P(sol) polarization free energy of solvation -26.774 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -38.213 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.345 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.120 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.559 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds