Wall clock time and date at job start Mon Mar 30 2020 07:06:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53007 * 1 3 3 C 1.50697 * 109.89214 * 2 1 4 4 C 1.38263 * 119.99250 * 268.78988 * 3 2 1 5 5 C 1.38222 * 120.02135 * 179.77322 * 4 3 2 6 6 C 1.38233 * 120.01734 * 0.50870 * 5 4 3 7 7 C 1.38332 * 119.98427 * 359.74613 * 6 5 4 8 8 Cl 1.73605 * 120.01196 * 180.02562 * 7 6 5 9 9 C 1.38197 * 119.99372 * 89.07229 * 3 2 1 10 10 C 1.54377 * 109.82570 * 239.06776 * 2 1 3 11 11 C 1.55305 * 102.25359 * 261.84140 * 10 2 1 12 12 C 1.54947 * 100.94107 * 325.87152 * 11 10 2 13 13 H 1.09001 * 110.31085 * 277.52756 * 12 11 10 14 14 C 1.50703 * 110.31147 * 155.36029 * 12 11 10 15 15 H 1.08000 * 119.99973 * 359.97438 * 14 12 11 16 16 C 1.37876 * 120.00218 * 179.97438 * 14 12 11 17 17 N 1.31517 * 119.99715 * 0.02562 * 16 14 12 18 18 Si 1.86789 * 120.00185 * 179.97438 * 16 14 12 19 19 H 1.48507 * 109.47191 * 60.00040 * 18 16 14 20 20 H 1.48498 * 109.47609 * 180.02562 * 18 16 14 21 21 H 1.48505 * 109.47457 * 300.00406 * 18 16 14 22 22 O 1.43233 * 109.83089 * 120.93489 * 2 1 3 23 23 H 1.09000 * 109.47125 * 180.93737 * 1 2 3 24 24 H 1.09010 * 109.47073 * 300.92932 * 1 2 3 25 25 H 1.08997 * 109.47414 * 60.93161 * 1 2 3 26 26 H 1.07997 * 119.98696 * 359.97438 * 4 3 2 27 27 H 1.08008 * 119.98581 * 180.25034 * 5 4 3 28 28 H 1.08003 * 120.00606 * 179.72058 * 6 5 4 29 29 H 1.08001 * 120.00318 * 359.97438 * 9 3 2 30 30 H 1.08999 * 110.84327 * 143.65461 * 10 2 1 31 31 H 1.09000 * 111.02558 * 20.11191 * 10 2 1 32 32 H 1.08998 * 111.12690 * 207.95359 * 11 10 2 33 33 H 1.08994 * 111.12720 * 83.78815 * 11 10 2 34 34 H 0.97005 * 119.99771 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0428 1.4171 0.0000 4 6 2.3018 2.0584 -1.1972 5 6 2.7676 3.3597 -1.1980 6 6 2.9849 4.0172 -0.0016 7 6 2.7310 3.3742 1.1966 8 17 3.0030 4.1994 2.6995 9 6 2.2597 2.0733 1.1967 10 6 2.0537 -0.7465 -1.2457 11 6 2.3681 -2.1570 -0.6768 12 6 2.8407 -1.7981 0.7545 13 1 3.8899 -1.5029 0.7436 14 6 2.6350 -2.9680 1.6820 15 1 2.2094 -3.8867 1.3063 16 6 2.9901 -2.8654 3.0103 17 7 3.5079 -1.7464 3.4680 18 14 2.7345 -4.3151 4.1601 19 1 3.5143 -5.4798 3.6692 20 1 3.1931 -3.9515 5.5249 21 1 1.2922 -4.6667 4.2004 22 8 2.0160 -0.6926 1.1557 23 1 -0.3633 -1.0275 0.0168 24 1 -0.3634 0.5282 0.8816 25 1 -0.3634 0.4993 -0.8982 26 1 2.1369 1.5434 -2.1321 27 1 2.9659 3.8615 -2.1337 28 1 3.3532 5.0325 -0.0024 29 1 2.0613 1.5708 2.1319 30 1 2.9570 -0.2731 -1.6303 31 1 1.2875 -0.8021 -2.0191 32 1 3.1636 -2.6408 -1.2435 33 1 1.4731 -2.7785 -0.6507 34 1 3.7580 -1.6744 4.4025 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000309432490.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:06:17 Heat of formation + Delta-G solvation = -36.347445 kcal Electronic energy + Delta-G solvation = -18207.619594 eV Core-core repulsion = 15323.808658 eV Total energy + Delta-G solvation = -2883.810937 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 266.081 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -39.69694 -37.80970 -36.10450 -33.13922 -31.72790 -31.15562 -30.17221 -28.99658 -26.55305 -23.83917 -22.56611 -22.13822 -20.19635 -19.33518 -16.90586 -16.54192 -15.37284 -15.24782 -14.75817 -14.62267 -14.18615 -13.57205 -13.30689 -13.15990 -12.61152 -12.32296 -12.01040 -11.84542 -11.80698 -11.41880 -11.22680 -11.06540 -10.89101 -10.78561 -10.57919 -10.37935 -10.18121 -10.01377 -9.80246 -9.12239 -8.59924 -8.51986 -8.38122 -7.99482 -6.00927 -4.14373 1.44144 1.60750 2.42824 3.32084 3.37356 3.39072 3.93146 4.42117 4.76276 4.97883 5.13341 5.30741 5.39569 5.47572 5.50392 5.54211 5.76718 5.88991 5.97880 6.06769 6.13005 6.21508 6.32175 6.45650 6.55188 6.56727 6.58304 6.69505 6.73391 6.85210 6.94907 7.14251 7.57563 7.88556 8.24977 8.61070 9.00872 9.56652 11.06150 Molecular weight = 266.08amu Principal moments of inertia in cm(-1) A = 0.019292 B = 0.006742 C = 0.005364 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1450.994379 B = 4152.360535 C = 5218.745005 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.140 4.140 2 C 0.133 3.867 3 C -0.061 4.061 4 C -0.117 4.117 5 C -0.118 4.118 6 C -0.124 4.124 7 C -0.037 4.037 8 Cl -0.081 7.081 9 C -0.075 4.075 10 C -0.146 4.146 11 C -0.146 4.146 12 C 0.211 3.789 13 H 0.029 0.971 14 C -0.534 4.534 15 H 0.062 0.938 16 C 0.079 3.921 17 N -0.861 5.861 18 Si 0.891 3.109 19 H -0.276 1.276 20 H -0.286 1.286 21 H -0.276 1.276 22 O -0.344 6.344 23 H 0.064 0.936 24 H 0.057 0.943 25 H 0.051 0.949 26 H 0.125 0.875 27 H 0.125 0.875 28 H 0.125 0.875 29 H 0.145 0.855 30 H 0.068 0.932 31 H 0.066 0.934 32 H 0.062 0.938 33 H 0.066 0.934 34 H 0.262 0.738 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.735 9.350 -8.663 13.037 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.198 4.198 2 C 0.092 3.908 3 C -0.062 4.062 4 C -0.135 4.135 5 C -0.136 4.136 6 C -0.142 4.142 7 C -0.063 4.063 8 Cl -0.052 7.052 9 C -0.094 4.094 10 C -0.184 4.184 11 C -0.184 4.184 12 C 0.157 3.843 13 H 0.046 0.954 14 C -0.571 4.571 15 H 0.080 0.920 16 C -0.127 4.127 17 N -0.497 5.497 18 Si 0.718 3.282 19 H -0.201 1.201 20 H -0.212 1.212 21 H -0.201 1.201 22 O -0.263 6.263 23 H 0.083 0.917 24 H 0.076 0.924 25 H 0.070 0.930 26 H 0.143 0.857 27 H 0.143 0.857 28 H 0.143 0.857 29 H 0.163 0.837 30 H 0.086 0.914 31 H 0.085 0.915 32 H 0.081 0.919 33 H 0.085 0.915 34 H 0.072 0.928 Dipole moment (debyes) X Y Z Total from point charges -2.674 9.574 -8.148 12.853 hybrid contribution 0.025 -0.627 0.629 0.889 sum -2.649 8.946 -7.518 11.983 Atomic orbital electron populations 1.21993 0.94432 1.02318 1.01009 1.20693 0.93371 0.87756 0.89017 1.20401 0.96986 0.96625 0.92181 1.21139 0.99665 0.94738 0.97951 1.20957 1.00513 0.94913 0.97194 1.20924 1.02090 1.00239 0.90980 1.20949 1.04522 0.94150 0.86676 1.98347 1.95117 1.78582 1.33167 1.21105 0.96543 0.91457 1.00255 1.23218 1.00611 0.97526 0.97037 1.23321 1.01011 0.94890 0.99197 1.20534 0.90514 0.84650 0.88650 0.95362 1.21050 1.44153 0.97375 0.94571 0.92021 1.25066 0.93830 0.95532 0.98286 1.70019 1.39665 1.24991 1.15024 0.86705 0.78723 0.82825 0.79964 1.20144 1.21187 1.20102 1.88862 1.67586 1.44346 1.25537 0.91727 0.92427 0.92958 0.85661 0.85672 0.85673 0.83719 0.91354 0.91481 0.91922 0.91533 0.92831 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.38 8.72 37.16 0.32 -2.06 16 2 C 0.13 2.55 1.08 -91.05 -0.10 2.45 16 3 C -0.06 -1.10 4.83 -104.63 -0.50 -1.60 16 4 C -0.12 -1.71 8.75 -39.58 -0.35 -2.06 16 5 C -0.12 -1.53 10.04 -39.59 -0.40 -1.93 16 6 C -0.12 -1.73 9.83 -39.55 -0.39 -2.12 16 7 C -0.04 -0.60 6.32 -39.50 -0.25 -0.85 16 8 Cl -0.08 -1.27 28.96 -51.86 -1.50 -2.77 16 9 C -0.08 -1.42 9.14 -39.55 -0.36 -1.78 16 10 C -0.15 -2.50 5.03 -24.79 -0.12 -2.63 16 11 C -0.15 -2.94 6.53 -24.48 -0.16 -3.10 16 12 C 0.21 5.36 3.22 -26.85 -0.09 5.27 16 13 H 0.03 0.79 8.14 -51.93 -0.42 0.37 16 14 C -0.53 -14.78 8.79 -34.44 -0.30 -15.08 16 15 H 0.06 1.65 7.76 -52.49 -0.41 1.25 16 16 C 0.08 2.22 5.43 -17.82 -0.10 2.12 16 17 N -0.86 -25.35 13.05 55.43 0.72 -24.63 16 18 Si 0.89 21.29 29.54 -169.99 -5.02 16.27 16 19 H -0.28 -6.44 7.11 56.52 0.40 -6.04 16 20 H -0.29 -6.80 7.11 56.52 0.40 -6.40 16 21 H -0.28 -6.53 7.11 56.52 0.40 -6.13 16 22 O -0.34 -8.56 9.10 -35.23 -0.32 -8.88 16 23 H 0.06 1.12 8.14 -51.93 -0.42 0.70 16 24 H 0.06 1.00 8.14 -51.92 -0.42 0.58 16 25 H 0.05 0.73 8.14 -51.93 -0.42 0.31 16 26 H 0.13 1.57 6.80 -52.49 -0.36 1.21 16 27 H 0.13 1.23 8.06 -52.48 -0.42 0.81 16 28 H 0.13 1.45 8.06 -52.48 -0.42 1.03 16 29 H 0.15 3.11 7.55 -52.49 -0.40 2.72 16 30 H 0.07 1.11 6.83 -51.93 -0.35 0.76 16 31 H 0.07 0.96 7.83 -51.93 -0.41 0.56 16 32 H 0.06 1.16 8.14 -51.93 -0.42 0.74 16 33 H 0.07 1.32 8.04 -51.93 -0.42 0.91 16 34 H 0.26 7.35 8.31 -40.82 -0.34 7.01 16 LS Contribution 299.63 15.07 4.52 4.52 Total: -1.00 -29.66 299.63 -8.83 -38.49 By element: Atomic # 1 Polarization: 4.79 SS G_CDS: -4.43 Total: 0.36 kcal Atomic # 6 Polarization: -20.57 SS G_CDS: -2.79 Total: -23.36 kcal Atomic # 7 Polarization: -25.35 SS G_CDS: 0.72 Total: -24.63 kcal Atomic # 8 Polarization: -8.56 SS G_CDS: -0.32 Total: -8.88 kcal Atomic # 14 Polarization: 21.29 SS G_CDS: -5.02 Total: 16.27 kcal Atomic # 17 Polarization: -1.27 SS G_CDS: -1.50 Total: -2.77 kcal Total LS contribution 4.52 Total: 4.52 kcal Total: -29.66 -8.83 -38.49 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000309432490.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 2.145 kcal (2) G-P(sol) polarization free energy of solvation -29.661 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -27.516 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.832 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.492 kcal (6) G-S(sol) free energy of system = (1) + (5) -36.347 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds