Wall clock time and date at job start Mon Mar 30 2020 07:46:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50694 * 1 3 3 C 1.32649 * 120.00550 * 2 1 4 4 C 1.47718 * 120.00550 * 188.03715 * 3 2 1 5 5 C 1.39639 * 120.07755 * 220.92290 * 4 3 2 6 6 C 1.37779 * 119.93014 * 179.78761 * 5 4 3 7 7 C 1.39042 * 120.06837 * 0.49319 * 6 5 4 8 8 O 1.35680 * 119.92153 * 179.76612 * 7 6 5 9 9 C 1.34812 * 116.99520 * 174.56347 * 8 7 6 10 10 H 1.07994 * 120.00543 * 5.31541 * 9 8 7 11 11 C 1.38650 * 119.99589 * 185.31658 * 9 8 7 12 12 N 1.31552 * 120.00102 * 359.97438 * 11 9 8 13 13 Si 1.86803 * 119.99599 * 180.02562 * 11 9 8 14 14 H 1.48501 * 109.47501 * 359.97438 * 13 11 9 15 15 H 1.48498 * 109.47172 * 119.99890 * 13 11 9 16 16 H 1.48503 * 109.46642 * 239.99581 * 13 11 9 17 17 C 1.39032 * 120.14579 * 359.73750 * 7 6 5 18 18 C 1.37781 * 120.07382 * 0.02562 * 17 7 6 19 19 C 1.50704 * 119.99860 * 180.02562 * 2 1 3 20 20 H 1.09001 * 109.46843 * 184.58941 * 19 2 1 21 21 C 1.52995 * 109.47428 * 64.58464 * 19 2 1 22 22 Cl 1.80303 * 109.46652 * 304.58704 * 19 2 1 23 23 H 1.09002 * 109.47571 * 89.99084 * 1 2 3 24 24 H 1.09005 * 109.46816 * 329.99619 * 1 2 3 25 25 H 1.08993 * 109.47385 * 209.99637 * 1 2 3 26 26 H 1.08004 * 119.99212 * 8.04548 * 3 2 1 27 27 H 1.08002 * 120.03115 * 0.02562 * 5 4 3 28 28 H 1.07996 * 119.96243 * 180.25233 * 6 5 4 29 29 H 0.97004 * 119.99809 * 179.97438 * 12 11 9 30 30 H 1.08001 * 119.95703 * 180.02562 * 17 7 6 31 31 H 1.08000 * 120.03386 * 179.97438 * 18 17 7 32 32 H 1.09006 * 109.46789 * 60.00295 * 21 19 2 33 33 H 1.09003 * 109.47386 * 180.02562 * 21 19 2 34 34 H 1.08992 * 109.47452 * 300.00660 * 21 19 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.1703 1.1487 0.0000 4 6 3.6366 1.1550 -0.1789 5 6 4.4310 2.0134 0.5840 6 6 5.7987 2.0136 0.4178 7 6 6.3872 1.1676 -0.5156 8 8 7.7340 1.1737 -0.6801 9 6 8.2523 0.2531 -1.5176 10 1 7.5967 -0.3889 -2.0870 11 6 9.6272 0.1305 -1.6477 12 7 10.4259 0.9129 -0.9544 13 14 10.3455 -1.1446 -2.8086 14 1 9.2435 -1.8917 -3.4664 15 1 11.1692 -0.4658 -3.8411 16 1 11.1948 -2.0903 -2.0407 17 6 5.5987 0.3152 -1.2801 18 6 4.2308 0.3066 -1.1154 19 6 2.2604 -1.3052 -0.0006 20 1 3.3292 -1.1076 0.0817 21 6 1.9793 -2.0558 -1.3037 22 17 1.7251 -2.3086 1.3985 23 1 -0.3634 0.0002 -1.0277 24 1 -0.3633 0.8900 0.5139 25 1 -0.3634 -0.8899 0.5137 26 1 1.6382 2.0794 0.1309 27 1 3.9740 2.6737 1.3063 28 1 6.4140 2.6744 1.0104 29 1 11.3879 0.8268 -1.0452 30 1 6.0591 -0.3410 -2.0040 31 1 3.6189 -0.3556 -1.7099 32 1 2.3029 -1.4491 -2.1496 33 1 2.5240 -3.0000 -1.3040 34 1 0.9106 -2.2532 -1.3861 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000309502484.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:46:13 Heat of formation + Delta-G solvation = -9.536851 kcal Electronic energy + Delta-G solvation = -17408.943483 eV Core-core repulsion = 14526.295141 eV Total energy + Delta-G solvation = -2882.648342 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 266.081 amu Computer time = 1.42 seconds Orbital eigenvalues (eV) -39.32276 -37.71485 -36.05543 -34.80673 -32.39069 -31.13001 -30.21756 -29.54267 -26.32697 -25.10809 -23.56497 -21.93926 -21.06622 -18.15640 -18.06587 -17.11595 -15.62913 -15.35196 -14.57077 -14.36830 -14.24375 -13.81938 -13.65920 -13.23347 -13.01899 -12.76656 -12.57592 -12.48054 -12.21648 -11.77164 -11.64695 -11.38753 -11.28288 -10.99043 -10.84022 -10.67638 -10.49034 -10.27327 -10.02233 -9.43727 -9.13537 -8.70873 -8.28300 -7.08697 -6.55157 -4.12551 1.52210 2.10820 2.37375 2.93520 3.08277 3.10066 3.14372 3.88966 4.47150 4.65990 4.92372 5.00624 5.06167 5.17276 5.29294 5.38176 5.49358 5.63475 5.65066 5.69470 5.77830 5.91036 5.97870 6.01395 6.11489 6.27714 6.52809 6.60030 6.78512 6.82580 7.01662 7.17758 7.27041 7.34449 7.70262 7.89761 8.90225 9.58557 10.62285 Molecular weight = 266.08amu Principal moments of inertia in cm(-1) A = 0.025104 B = 0.004694 C = 0.004279 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1115.101183 B = 5963.321289 C = 6542.386980 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.108 4.108 2 C -0.167 4.167 3 C -0.060 4.060 4 C -0.175 4.175 5 C -0.055 4.055 6 C -0.193 4.193 7 C 0.159 3.841 8 O -0.171 6.171 9 C -0.393 4.393 10 H 0.095 0.905 11 C 0.040 3.960 12 N -0.857 5.857 13 Si 0.942 3.058 14 H -0.266 1.266 15 H -0.275 1.275 16 H -0.275 1.275 17 C -0.237 4.237 18 C -0.066 4.066 19 C 0.034 3.966 20 H 0.122 0.878 21 C -0.156 4.156 22 Cl -0.198 7.198 23 H 0.062 0.938 24 H 0.061 0.939 25 H 0.064 0.936 26 H 0.115 0.885 27 H 0.114 0.886 28 H 0.119 0.881 29 H 0.271 0.729 30 H 0.129 0.871 31 H 0.114 0.886 32 H 0.075 0.925 33 H 0.067 0.933 34 H 0.065 0.935 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -15.391 -2.975 -0.251 15.678 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.165 4.165 2 C -0.168 4.168 3 C -0.078 4.078 4 C -0.176 4.176 5 C -0.073 4.073 6 C -0.212 4.212 7 C 0.104 3.896 8 O -0.073 6.073 9 C -0.469 4.469 10 H 0.112 0.888 11 C -0.165 4.165 12 N -0.491 5.491 13 Si 0.767 3.233 14 H -0.190 1.190 15 H -0.200 1.200 16 H -0.200 1.200 17 C -0.256 4.256 18 C -0.084 4.084 19 C -0.008 4.008 20 H 0.140 0.860 21 C -0.213 4.213 22 Cl -0.171 7.171 23 H 0.081 0.919 24 H 0.080 0.920 25 H 0.083 0.917 26 H 0.133 0.867 27 H 0.132 0.868 28 H 0.137 0.863 29 H 0.081 0.919 30 H 0.147 0.853 31 H 0.132 0.868 32 H 0.094 0.906 33 H 0.086 0.914 34 H 0.084 0.916 Dipole moment (debyes) X Y Z Total from point charges -14.967 -2.883 -0.030 15.242 hybrid contribution 0.367 -0.638 -0.527 0.906 sum -14.599 -3.521 -0.557 15.028 Atomic orbital electron populations 1.20686 0.91690 1.02540 1.01551 1.21688 0.95541 0.93120 1.06438 1.21493 0.92655 0.96665 0.96995 1.18482 0.92095 1.03482 1.03568 1.20720 0.92473 0.96746 0.97381 1.20177 0.94387 1.04292 1.02328 1.19503 0.84978 0.92826 0.92282 1.83955 1.15009 1.50426 1.57945 1.21422 0.90961 1.14076 1.20396 0.88805 1.25331 0.94988 0.98174 0.97976 1.70045 1.04252 1.36404 1.38446 0.85628 0.79291 0.79318 0.79103 1.19004 1.20036 1.20008 1.21096 0.93582 1.05426 1.05505 1.21094 0.94255 0.96516 0.96496 1.23432 1.01443 0.89513 0.86440 0.85993 1.22172 1.02864 1.00717 0.95557 1.98696 1.92679 1.74012 1.51742 0.91910 0.92034 0.91701 0.86709 0.86763 0.86296 0.91877 0.85314 0.86824 0.90612 0.91399 0.91554 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.11 9.58 36.00 0.35 -0.77 16 2 C -0.17 -2.11 4.85 -101.24 -0.49 -2.60 16 3 C -0.06 -0.82 9.37 -37.61 -0.35 -1.17 16 4 C -0.18 -2.92 5.07 -104.98 -0.53 -3.45 16 5 C -0.05 -0.96 9.78 -39.23 -0.38 -1.34 16 6 C -0.19 -3.95 9.98 -39.45 -0.39 -4.34 16 7 C 0.16 3.72 6.65 -38.99 -0.26 3.46 16 8 O -0.17 -4.75 9.75 0.32 0.00 -4.75 16 9 C -0.39 -10.66 9.48 30.88 0.29 -10.37 16 10 H 0.09 2.35 5.19 -52.49 -0.27 2.08 16 11 C 0.04 1.08 5.49 -17.52 -0.10 0.99 16 12 N -0.86 -24.58 13.67 55.48 0.76 -23.82 16 13 Si 0.94 19.98 29.55 -169.99 -5.02 14.96 16 14 H -0.27 -5.39 7.11 56.52 0.40 -4.98 16 15 H -0.27 -5.71 7.11 56.52 0.40 -5.31 16 16 H -0.27 -5.73 7.11 56.52 0.40 -5.32 16 17 C -0.24 -4.93 9.15 -39.45 -0.36 -5.29 16 18 C -0.07 -1.15 7.31 -39.22 -0.29 -1.43 16 19 C 0.03 0.45 2.64 -27.88 -0.07 0.38 16 20 H 0.12 1.88 4.81 -51.93 -0.25 1.63 16 21 C -0.16 -1.73 8.75 37.16 0.33 -1.40 16 22 Cl -0.20 -2.71 27.63 -51.86 -1.43 -4.14 16 23 H 0.06 0.58 8.14 -51.93 -0.42 0.15 16 24 H 0.06 0.57 8.05 -51.93 -0.42 0.16 16 25 H 0.06 0.67 7.19 -51.93 -0.37 0.30 16 26 H 0.12 1.36 8.03 -52.48 -0.42 0.94 16 27 H 0.11 1.66 8.06 -52.49 -0.42 1.24 16 28 H 0.12 2.35 8.06 -52.49 -0.42 1.93 16 29 H 0.27 7.10 8.31 -40.82 -0.34 6.76 16 30 H 0.13 2.68 5.62 -52.49 -0.29 2.38 16 31 H 0.11 1.70 4.64 -52.49 -0.24 1.46 16 32 H 0.08 0.81 6.42 -51.93 -0.33 0.47 16 33 H 0.07 0.73 8.14 -51.93 -0.42 0.30 16 34 H 0.07 0.66 7.88 -51.93 -0.41 0.25 16 LS Contribution 298.58 15.07 4.50 4.50 Total: -1.00 -28.85 298.58 -7.30 -36.15 By element: Atomic # 1 Polarization: 8.27 SS G_CDS: -3.84 Total: 4.43 kcal Atomic # 6 Polarization: -25.08 SS G_CDS: -2.27 Total: -27.34 kcal Atomic # 7 Polarization: -24.58 SS G_CDS: 0.76 Total: -23.82 kcal Atomic # 8 Polarization: -4.75 SS G_CDS: 0.00 Total: -4.75 kcal Atomic # 14 Polarization: 19.98 SS G_CDS: -5.02 Total: 14.96 kcal Atomic # 17 Polarization: -2.71 SS G_CDS: -1.43 Total: -4.14 kcal Total LS contribution 4.50 Total: 4.50 kcal Total: -28.85 -7.30 -36.15 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000309502484.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 26.618 kcal (2) G-P(sol) polarization free energy of solvation -28.851 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -2.233 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.304 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.154 kcal (6) G-S(sol) free energy of system = (1) + (5) -9.537 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.42 seconds