Wall clock time and date at job start Mon Mar 30 2020 07:46:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.32671 * 119.99981 * 2 1 4 4 C 1.47676 * 119.99870 * 7.23341 * 3 2 1 5 5 C 1.39496 * 120.18529 * 36.08372 * 4 3 2 6 6 C 1.37951 * 119.92820 * 180.02562 * 5 4 3 7 7 C 1.38483 * 120.29356 * 0.02562 * 6 5 4 8 8 C 1.38121 * 120.36728 * 0.02562 * 7 6 5 9 9 C 1.38732 * 120.06656 * 359.67043 * 8 7 6 10 10 O 1.35644 * 120.14607 * 180.32499 * 9 8 7 11 11 C 1.34818 * 116.99788 * 354.17612 * 10 9 8 12 12 H 1.07992 * 120.00097 * 5.07726 * 11 10 9 13 13 C 1.38648 * 119.99734 * 185.07887 * 11 10 9 14 14 N 1.31558 * 120.00480 * 359.97438 * 13 11 10 15 15 Si 1.86801 * 119.99947 * 180.02562 * 13 11 10 16 16 H 1.48508 * 109.46862 * 359.97438 * 15 13 11 17 17 H 1.48491 * 109.47529 * 119.99710 * 15 13 11 18 18 H 1.48499 * 109.46684 * 239.99985 * 15 13 11 19 19 C 1.50699 * 120.00157 * 180.02562 * 2 1 3 20 20 H 1.08996 * 109.47321 * 49.99259 * 19 2 1 21 21 C 1.53006 * 109.46934 * 289.99544 * 19 2 1 22 22 Cl 1.80305 * 109.47306 * 169.99823 * 19 2 1 23 23 H 1.09001 * 109.46580 * 266.07956 * 1 2 3 24 24 H 1.08998 * 109.47424 * 26.07778 * 1 2 3 25 25 H 1.08994 * 109.47053 * 146.08288 * 1 2 3 26 26 H 1.08005 * 119.99986 * 187.22423 * 3 2 1 27 27 H 1.08001 * 120.03826 * 0.02859 * 5 4 3 28 28 H 1.08004 * 119.85552 * 179.97438 * 6 5 4 29 29 H 1.07999 * 119.81532 * 179.97438 * 7 6 5 30 30 H 1.08003 * 119.96101 * 180.02562 * 8 7 6 31 31 H 0.96989 * 120.00467 * 180.02562 * 14 13 11 32 32 H 1.08997 * 109.46843 * 60.00029 * 21 19 2 33 33 H 1.09002 * 109.47255 * 179.97438 * 21 19 2 34 34 H 1.09004 * 109.47176 * 300.00020 * 21 19 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1704 1.1490 0.0000 4 6 1.4408 2.4228 0.1610 5 6 0.3311 2.4938 1.0034 6 6 -0.3468 3.6864 1.1495 7 6 0.0688 4.8148 0.4628 8 6 1.1653 4.7580 -0.3752 9 6 1.8620 3.5681 -0.5285 10 8 2.9429 3.5121 -1.3460 11 6 3.2175 4.6131 -2.0739 12 1 2.6388 5.5135 -1.9303 13 6 4.2429 4.5895 -3.0068 14 7 4.9483 3.4928 -3.1814 15 14 4.6239 6.1153 -4.0149 16 1 3.6936 7.2073 -3.6308 17 1 6.0225 6.5424 -3.7571 18 1 4.4578 5.8089 -5.4584 19 6 2.2605 -1.3051 -0.0006 20 1 1.8701 -1.9497 -0.7880 21 6 2.0884 -1.9940 1.3547 22 17 4.0109 -0.9884 -0.2957 23 1 -0.3632 -0.0703 1.0253 24 1 -0.3634 0.9230 -0.4517 25 1 -0.3633 -0.8528 -0.5734 26 1 3.2440 1.1527 -0.1176 27 1 0.0031 1.6163 1.5407 28 1 -1.2060 3.7400 1.8017 29 1 -0.4679 5.7443 0.5826 30 1 1.4839 5.6422 -0.9073 31 1 5.6659 3.4763 -3.8337 32 1 1.0303 -2.1854 1.5331 33 1 2.6330 -2.9382 1.3542 34 1 2.4788 -1.3493 2.1422 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000309515037.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:46:37 Heat of formation + Delta-G solvation = -5.348232 kcal Electronic energy + Delta-G solvation = -17716.023993 eV Core-core repulsion = 14833.557283 eV Total energy + Delta-G solvation = -2882.466710 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 266.081 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -39.22100 -37.14770 -36.18246 -34.74283 -32.34033 -31.65316 -29.10834 -28.88839 -26.72795 -25.36063 -23.45726 -21.57313 -20.85706 -18.04087 -17.90399 -16.67645 -15.37172 -15.25099 -14.76756 -14.34400 -14.25792 -13.76717 -13.57360 -13.51405 -12.75824 -12.49736 -12.38431 -12.25287 -11.73885 -11.61259 -11.41949 -11.28586 -11.13455 -10.86827 -10.67118 -10.44015 -10.36044 -10.15281 -9.91638 -9.35294 -8.96350 -8.81019 -7.77313 -7.04616 -6.46333 -4.04647 1.74603 2.36487 2.54370 3.01261 3.11726 3.12988 3.18435 3.94687 4.59642 4.84203 5.07214 5.10009 5.21087 5.23173 5.52981 5.58990 5.67600 5.71502 5.72389 5.82640 5.94389 6.01236 6.12089 6.21204 6.27952 6.44480 6.68615 6.88113 6.95720 7.05406 7.21772 7.33957 7.37410 7.51900 7.80654 7.97445 8.98222 9.67638 10.70471 Molecular weight = 266.08amu Principal moments of inertia in cm(-1) A = 0.016203 B = 0.007011 C = 0.005070 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1727.638658 B = 3992.754909 C = 5520.877713 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.101 4.101 2 C -0.197 4.197 3 C -0.043 4.043 4 C -0.146 4.146 5 C -0.062 4.062 6 C -0.221 4.221 7 C -0.068 4.068 8 C -0.237 4.237 9 C 0.166 3.834 10 O -0.164 6.164 11 C -0.395 4.395 12 H 0.093 0.907 13 C 0.042 3.958 14 N -0.853 5.853 15 Si 0.940 3.060 16 H -0.267 1.267 17 H -0.276 1.276 18 H -0.276 1.276 19 C 0.046 3.954 20 H 0.096 0.904 21 C -0.149 4.149 22 Cl -0.174 7.174 23 H 0.058 0.942 24 H 0.075 0.925 25 H 0.050 0.950 26 H 0.133 0.867 27 H 0.119 0.881 28 H 0.106 0.894 29 H 0.106 0.894 30 H 0.128 0.872 31 H 0.270 0.730 32 H 0.071 0.929 33 H 0.063 0.937 34 H 0.067 0.933 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.375 -6.324 6.513 11.696 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.158 4.158 2 C -0.198 4.198 3 C -0.061 4.061 4 C -0.148 4.148 5 C -0.080 4.080 6 C -0.240 4.240 7 C -0.087 4.087 8 C -0.256 4.256 9 C 0.111 3.889 10 O -0.066 6.066 11 C -0.471 4.471 12 H 0.110 0.890 13 C -0.164 4.164 14 N -0.487 5.487 15 Si 0.765 3.235 16 H -0.191 1.191 17 H -0.201 1.201 18 H -0.201 1.201 19 C 0.003 3.997 20 H 0.114 0.886 21 C -0.206 4.206 22 Cl -0.147 7.147 23 H 0.077 0.923 24 H 0.094 0.906 25 H 0.069 0.931 26 H 0.150 0.850 27 H 0.137 0.863 28 H 0.124 0.876 29 H 0.124 0.876 30 H 0.145 0.855 31 H 0.080 0.920 32 H 0.089 0.911 33 H 0.082 0.918 34 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges -6.856 -6.559 6.280 11.378 hybrid contribution 0.280 0.931 -0.603 1.144 sum -6.576 -5.628 5.677 10.351 Atomic orbital electron populations 1.20862 0.91573 1.02514 1.00844 1.21522 0.95336 0.92839 1.10092 1.21813 1.00405 0.90215 0.93647 1.18106 0.99640 0.92142 1.04870 1.21020 0.93326 0.97251 0.96386 1.20527 1.03377 0.93792 1.06312 1.20823 0.95428 0.97368 0.95039 1.21127 1.00040 0.98717 1.05739 1.19460 0.86803 0.92284 0.90345 1.83951 1.36496 1.38877 1.47306 1.21396 1.18000 0.90039 1.17636 0.88988 1.25293 0.95563 0.98688 0.96825 1.70056 1.19267 1.26507 1.32899 0.85664 0.78742 0.79887 0.79240 1.19092 1.20111 1.20109 1.22748 0.80889 0.96554 0.99551 0.88552 1.22070 1.02486 1.00437 0.95622 1.98728 1.22572 1.96437 1.97012 0.92303 0.90596 0.93078 0.84984 0.86315 0.87619 0.87562 0.85474 0.91999 0.91052 0.91802 0.91345 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -1.41 8.06 36.01 0.29 -1.12 16 2 C -0.20 -3.24 5.27 -101.24 -0.53 -3.77 16 3 C -0.04 -0.87 8.56 -37.62 -0.32 -1.19 16 4 C -0.15 -3.10 5.15 -104.85 -0.54 -3.64 16 5 C -0.06 -1.10 7.61 -39.22 -0.30 -1.40 16 6 C -0.22 -3.79 10.03 -39.60 -0.40 -4.19 16 7 C -0.07 -1.25 10.03 -39.53 -0.40 -1.65 16 8 C -0.24 -5.17 9.16 -39.44 -0.36 -5.53 16 9 C 0.17 4.03 6.65 -38.68 -0.26 3.77 16 10 O -0.16 -4.65 9.21 0.41 0.00 -4.64 16 11 C -0.39 -10.97 9.49 30.88 0.29 -10.67 16 12 H 0.09 2.37 5.21 -52.49 -0.27 2.10 16 13 C 0.04 1.14 5.49 -17.52 -0.10 1.04 16 14 N -0.85 -24.93 13.67 55.48 0.76 -24.17 16 15 Si 0.94 20.49 29.55 -169.99 -5.02 15.47 16 16 H -0.27 -5.56 7.11 56.52 0.40 -5.16 16 17 H -0.28 -5.89 7.11 56.52 0.40 -5.49 16 18 H -0.28 -5.90 7.11 56.52 0.40 -5.50 16 19 C 0.05 0.66 3.68 -27.88 -0.10 0.55 16 20 H 0.10 1.23 8.14 -51.93 -0.42 0.81 16 21 C -0.15 -1.66 9.24 37.16 0.34 -1.31 16 22 Cl -0.17 -3.00 26.29 -51.86 -1.36 -4.36 16 23 H 0.06 0.70 6.95 -51.93 -0.36 0.34 16 24 H 0.08 1.20 6.02 -51.93 -0.31 0.88 16 25 H 0.05 0.61 8.14 -51.93 -0.42 0.19 16 26 H 0.13 3.00 6.01 -52.48 -0.32 2.68 16 27 H 0.12 1.79 5.58 -52.49 -0.29 1.50 16 28 H 0.11 1.50 8.06 -52.48 -0.42 1.08 16 29 H 0.11 1.63 8.06 -52.49 -0.42 1.21 16 30 H 0.13 2.76 5.64 -52.48 -0.30 2.47 16 31 H 0.27 7.25 8.31 -40.82 -0.34 6.91 16 32 H 0.07 0.67 8.04 -51.93 -0.42 0.25 16 33 H 0.06 0.63 8.14 -51.93 -0.42 0.21 16 34 H 0.07 0.81 8.14 -51.93 -0.42 0.39 16 LS Contribution 298.90 15.07 4.50 4.50 Total: -1.00 -30.02 298.90 -7.44 -37.46 By element: Atomic # 1 Polarization: 8.79 SS G_CDS: -3.94 Total: 4.85 kcal Atomic # 6 Polarization: -26.73 SS G_CDS: -2.38 Total: -29.11 kcal Atomic # 7 Polarization: -24.93 SS G_CDS: 0.76 Total: -24.17 kcal Atomic # 8 Polarization: -4.65 SS G_CDS: 0.00 Total: -4.64 kcal Atomic # 14 Polarization: 20.49 SS G_CDS: -5.02 Total: 15.47 kcal Atomic # 17 Polarization: -3.00 SS G_CDS: -1.36 Total: -4.36 kcal Total LS contribution 4.50 Total: 4.50 kcal Total: -30.02 -7.44 -37.46 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000309515037.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.113 kcal (2) G-P(sol) polarization free energy of solvation -30.023 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 2.090 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.438 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.461 kcal (6) G-S(sol) free energy of system = (1) + (5) -5.348 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds