Wall clock time and date at job start Mon Mar 30 2020 07:06:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.50706 * 109.87003 * 2 1 4 4 C 1.38229 * 120.01238 * 119.29807 * 3 2 1 5 5 C 1.38220 * 120.01759 * 180.02562 * 4 3 2 6 6 C 1.38263 * 120.02201 * 0.02562 * 5 4 3 7 7 C 1.38190 * 120.01745 * 359.97438 * 6 5 4 8 8 C 1.38329 * 120.00141 * 299.01919 * 3 2 1 9 9 Cl 1.73606 * 120.01794 * 359.97438 * 8 3 2 10 10 C 1.54093 * 109.88185 * 238.98815 * 2 1 3 11 11 C 1.54813 * 104.19045 * 242.60364 * 10 2 1 12 12 C 1.54995 * 102.09019 * 20.88200 * 11 10 2 13 13 H 1.09007 * 110.61967 * 81.63033 * 12 11 10 14 14 C 1.50699 * 110.61837 * 204.47291 * 12 11 10 15 15 H 1.07999 * 119.99792 * 359.97438 * 14 12 11 16 16 C 1.37876 * 120.00166 * 179.97438 * 14 12 11 17 17 N 1.31517 * 120.00061 * 359.97438 * 16 14 12 18 18 Si 1.86795 * 120.00117 * 180.02562 * 16 14 12 19 19 H 1.48502 * 109.47055 * 359.97438 * 18 16 14 20 20 H 1.48505 * 109.47277 * 119.99662 * 18 16 14 21 21 H 1.48497 * 109.47076 * 239.99645 * 18 16 14 22 22 O 1.43751 * 109.87945 * 121.15595 * 2 1 3 23 23 H 1.09002 * 109.47153 * 181.00995 * 1 2 3 24 24 H 1.09001 * 109.46832 * 61.01186 * 1 2 3 25 25 H 1.09004 * 109.47261 * 301.01167 * 1 2 3 26 26 H 1.08001 * 119.99144 * 0.02562 * 4 3 2 27 27 H 1.08001 * 119.98664 * 179.97438 * 5 4 3 28 28 H 1.08006 * 119.98866 * 179.97438 * 6 5 4 29 29 H 1.07998 * 120.01039 * 179.97438 * 7 6 5 30 30 H 1.08999 * 110.49015 * 1.28480 * 10 2 1 31 31 H 1.09004 * 110.49232 * 123.92763 * 10 2 1 32 32 H 1.09009 * 110.90384 * 139.07420 * 11 10 2 33 33 H 1.08988 * 110.91004 * 262.68027 * 11 10 2 34 34 H 0.96999 * 120.00193 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0422 1.4173 0.0000 4 6 2.8281 1.8685 1.0438 5 6 3.2975 3.1685 1.0442 6 6 2.9808 4.0186 0.0008 7 6 2.1953 3.5689 -1.0433 8 6 1.7308 2.2653 -1.0476 9 17 0.7504 1.6972 -2.3629 10 6 2.0540 -0.7466 -1.2419 11 6 2.8325 -1.9515 -0.6600 12 6 2.2281 -2.0723 0.7621 13 1 1.2827 -2.6141 0.7327 14 6 3.1978 -2.7508 1.6951 15 1 4.1613 -3.0748 1.3302 16 6 2.8551 -2.9578 3.0144 17 7 1.6820 -2.5628 3.4588 18 14 4.0574 -3.7981 4.1709 19 1 5.2979 -4.1422 3.4307 20 1 4.3875 -2.8825 5.2926 21 1 3.4424 -5.0381 4.7088 22 8 2.0188 -0.6994 1.1569 23 1 -0.3633 -1.0275 0.0181 24 1 -0.3633 0.4980 -0.8989 25 1 -0.3634 0.5295 0.8808 26 1 3.0754 1.2050 1.8593 27 1 3.9111 3.5206 1.8603 28 1 3.3476 5.0345 0.0018 29 1 1.9477 4.2331 -1.8581 30 1 1.2238 -1.0907 -1.8588 31 1 2.7197 -0.1055 -1.8199 32 1 2.6432 -2.8542 -1.2410 33 1 3.9003 -1.7383 -0.6120 34 1 1.4407 -2.7088 4.3869 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000390489859.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:06:54 Heat of formation + Delta-G solvation = -31.603652 kcal Electronic energy + Delta-G solvation = -18455.041215 eV Core-core repulsion = 15571.435985 eV Total energy + Delta-G solvation = -2883.605230 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 266.081 amu Computer time = 0.35 seconds Orbital eigenvalues (eV) -39.71095 -37.77023 -36.24698 -33.13030 -31.71771 -30.96832 -30.32924 -28.89024 -26.61934 -23.81054 -22.42817 -22.19292 -20.12922 -19.43004 -17.09131 -16.39657 -15.49479 -15.04364 -14.88431 -14.46132 -13.94127 -13.66786 -13.47941 -13.12652 -13.01564 -12.45997 -11.99743 -11.83983 -11.75473 -11.46142 -11.17578 -11.02351 -10.95656 -10.58762 -10.45747 -10.18155 -10.02688 -9.93336 -9.70076 -9.07463 -8.66488 -8.58847 -8.38748 -8.03831 -6.04533 -4.17035 1.39573 1.56222 2.35535 3.28137 3.36359 3.40158 3.90396 4.39811 4.74480 5.00407 5.15060 5.24449 5.43379 5.50705 5.60286 5.64951 5.74625 5.94501 6.01594 6.17816 6.22165 6.24069 6.35850 6.46707 6.60078 6.65059 6.70249 6.77610 6.83502 6.93162 6.96774 7.13696 7.52343 7.86901 8.22468 8.56652 8.95339 9.53739 11.03089 Molecular weight = 266.08amu Principal moments of inertia in cm(-1) A = 0.026094 B = 0.006516 C = 0.005737 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1072.787201 B = 4296.252129 C = 4879.651184 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.163 4.163 2 C 0.131 3.869 3 C -0.051 4.051 4 C -0.080 4.080 5 C -0.120 4.120 6 C -0.122 4.122 7 C -0.119 4.119 8 C -0.034 4.034 9 Cl -0.073 7.073 10 C -0.136 4.136 11 C -0.149 4.149 12 C 0.211 3.789 13 H 0.030 0.970 14 C -0.527 4.527 15 H 0.064 0.936 16 C 0.077 3.923 17 N -0.863 5.863 18 Si 0.891 3.109 19 H -0.272 1.272 20 H -0.282 1.282 21 H -0.283 1.283 22 O -0.344 6.344 23 H 0.061 0.939 24 H 0.064 0.936 25 H 0.054 0.946 26 H 0.149 0.851 27 H 0.125 0.875 28 H 0.125 0.875 29 H 0.127 0.873 30 H 0.066 0.934 31 H 0.061 0.939 32 H 0.059 0.941 33 H 0.063 0.937 34 H 0.261 0.739 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.161 10.546 -8.457 13.519 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.220 4.220 2 C 0.090 3.910 3 C -0.052 4.052 4 C -0.098 4.098 5 C -0.138 4.138 6 C -0.140 4.140 7 C -0.138 4.138 8 C -0.061 4.061 9 Cl -0.044 7.044 10 C -0.174 4.174 11 C -0.187 4.187 12 C 0.156 3.844 13 H 0.048 0.952 14 C -0.564 4.564 15 H 0.082 0.918 16 C -0.129 4.129 17 N -0.500 5.500 18 Si 0.719 3.281 19 H -0.196 1.196 20 H -0.208 1.208 21 H -0.209 1.209 22 O -0.263 6.263 23 H 0.080 0.920 24 H 0.083 0.917 25 H 0.073 0.927 26 H 0.166 0.834 27 H 0.143 0.857 28 H 0.143 0.857 29 H 0.145 0.855 30 H 0.085 0.915 31 H 0.079 0.921 32 H 0.078 0.922 33 H 0.082 0.918 34 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges -0.338 10.585 -8.217 13.405 hybrid contribution 0.434 -0.466 0.383 0.743 sum 0.096 10.119 -7.834 12.798 Atomic orbital electron populations 1.22401 0.95129 1.02537 1.01948 1.20653 0.93067 0.88074 0.89206 1.19967 0.96670 0.95798 0.92778 1.21301 0.94751 0.95391 0.98320 1.21303 1.00020 0.93980 0.98532 1.21010 0.98979 0.99794 0.94225 1.20881 0.99448 0.93753 0.99738 1.20700 0.99509 0.94621 0.91246 1.98318 1.69299 1.89292 1.47499 1.22978 0.99775 0.97742 0.96903 1.23226 0.99942 0.96043 0.99462 1.20668 0.94952 0.80108 0.88702 0.95234 1.21039 1.02502 1.37842 0.95053 0.91771 1.25084 0.95027 0.94465 0.98306 1.70041 1.19960 1.44395 1.15573 0.86563 0.81446 0.79184 0.80947 1.19604 1.20837 1.20891 1.89227 1.84569 1.23462 1.29053 0.92040 0.91703 0.92662 0.83371 0.85718 0.85732 0.85514 0.91543 0.92051 0.92186 0.91836 0.92931 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -3.11 8.35 37.16 0.31 -2.79 16 2 C 0.13 2.67 0.87 -91.20 -0.08 2.59 16 3 C -0.05 -0.94 4.63 -104.59 -0.48 -1.42 16 4 C -0.08 -1.43 9.39 -39.59 -0.37 -1.81 16 5 C -0.12 -1.73 10.05 -39.58 -0.40 -2.13 16 6 C -0.12 -1.54 10.04 -39.59 -0.40 -1.94 16 7 C -0.12 -1.60 9.83 -39.55 -0.39 -1.99 16 8 C -0.03 -0.54 5.82 -39.50 -0.23 -0.77 16 9 Cl -0.07 -1.06 23.64 -51.86 -1.23 -2.28 16 10 C -0.14 -2.57 4.66 -25.21 -0.12 -2.68 16 11 C -0.15 -3.16 6.55 -24.72 -0.16 -3.32 16 12 C 0.21 5.39 3.03 -26.83 -0.08 5.31 16 13 H 0.03 0.82 8.12 -51.93 -0.42 0.40 16 14 C -0.53 -14.62 8.81 -34.44 -0.30 -14.92 16 15 H 0.06 1.74 7.77 -52.49 -0.41 1.33 16 16 C 0.08 2.15 5.44 -17.82 -0.10 2.05 16 17 N -0.86 -25.22 13.13 55.43 0.73 -24.49 16 18 Si 0.89 21.13 29.54 -169.99 -5.02 16.11 16 19 H -0.27 -6.32 7.11 56.52 0.40 -5.91 16 20 H -0.28 -6.67 7.11 56.52 0.40 -6.27 16 21 H -0.28 -6.62 7.11 56.52 0.40 -6.21 16 22 O -0.34 -8.64 8.86 -35.23 -0.31 -8.95 16 23 H 0.06 1.21 8.12 -51.93 -0.42 0.79 16 24 H 0.06 1.08 5.11 -51.93 -0.27 0.81 16 25 H 0.05 1.08 8.14 -51.93 -0.42 0.66 16 26 H 0.15 3.01 7.03 -52.49 -0.37 2.64 16 27 H 0.12 1.49 8.06 -52.49 -0.42 1.07 16 28 H 0.12 1.19 8.06 -52.48 -0.42 0.76 16 29 H 0.13 1.39 8.06 -52.49 -0.42 0.96 16 30 H 0.07 1.16 7.66 -51.93 -0.40 0.76 16 31 H 0.06 1.09 7.05 -51.93 -0.37 0.73 16 32 H 0.06 1.17 8.14 -51.92 -0.42 0.74 16 33 H 0.06 1.36 8.04 -51.94 -0.42 0.94 16 34 H 0.26 7.19 8.31 -40.82 -0.34 6.85 16 LS Contribution 291.64 15.07 4.39 4.39 Total: -1.00 -29.46 291.64 -8.55 -38.01 By element: Atomic # 1 Polarization: 5.37 SS G_CDS: -4.32 Total: 1.05 kcal Atomic # 6 Polarization: -21.04 SS G_CDS: -2.80 Total: -23.84 kcal Atomic # 7 Polarization: -25.22 SS G_CDS: 0.73 Total: -24.49 kcal Atomic # 8 Polarization: -8.64 SS G_CDS: -0.31 Total: -8.95 kcal Atomic # 14 Polarization: 21.13 SS G_CDS: -5.02 Total: 16.11 kcal Atomic # 17 Polarization: -1.06 SS G_CDS: -1.23 Total: -2.28 kcal Total LS contribution 4.39 Total: 4.39 kcal Total: -29.46 -8.55 -38.01 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000390489859.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 6.404 kcal (2) G-P(sol) polarization free energy of solvation -29.455 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -23.051 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.553 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.008 kcal (6) G-S(sol) free energy of system = (1) + (5) -31.604 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds