Wall clock time and date at job start Mon Mar 30 2020 07:06:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52992 * 1 3 3 C 1.50703 * 109.87254 * 2 1 4 4 C 1.38236 * 120.00590 * 240.17469 * 3 2 1 5 5 C 1.38225 * 120.01073 * 179.74816 * 4 3 2 6 6 C 1.38268 * 120.02473 * 0.54648 * 5 4 3 7 7 C 1.38194 * 120.01083 * 359.70756 * 6 5 4 8 8 C 1.38327 * 120.00379 * 60.44585 * 3 2 1 9 9 Cl 1.73597 * 120.01572 * 0.02562 * 8 3 2 10 10 C 1.54099 * 109.88040 * 121.16558 * 2 1 3 11 11 C 1.54812 * 104.18952 * 117.39308 * 10 2 1 12 12 C 1.54992 * 102.09147 * 339.11921 * 11 10 2 13 13 H 1.09005 * 110.61954 * 278.52638 * 12 11 10 14 14 C 1.50698 * 110.62052 * 155.52675 * 12 11 10 15 15 H 1.08004 * 119.99772 * 4.47414 * 14 12 11 16 16 C 1.37872 * 120.00261 * 184.47752 * 14 12 11 17 17 N 1.31518 * 120.00112 * 179.97438 * 16 14 12 18 18 Si 1.86807 * 120.00085 * 359.97438 * 16 14 12 19 19 H 1.48498 * 109.46974 * 90.00320 * 18 16 14 20 20 H 1.48499 * 109.46655 * 210.00144 * 18 16 14 21 21 H 1.48501 * 109.46624 * 330.00040 * 18 16 14 22 22 O 1.43745 * 109.87687 * 238.99498 * 2 1 3 23 23 H 1.08999 * 109.47409 * 179.55146 * 1 2 3 24 24 H 1.09008 * 109.47312 * 299.55479 * 1 2 3 25 25 H 1.09003 * 109.47124 * 59.54989 * 1 2 3 26 26 H 1.07995 * 119.99740 * 359.97438 * 4 3 2 27 27 H 1.07995 * 119.98701 * 180.24976 * 5 4 3 28 28 H 1.08004 * 119.99222 * 179.72216 * 6 5 4 29 29 H 1.08009 * 120.00060 * 180.02562 * 7 6 5 30 30 H 1.09000 * 110.48694 * 236.07043 * 10 2 1 31 31 H 1.09001 * 110.48278 * 358.71255 * 10 2 1 32 32 H 1.08996 * 110.90812 * 97.31955 * 11 10 2 33 33 H 1.09000 * 110.90395 * 220.92375 * 11 10 2 34 34 H 0.96999 * 120.00264 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0422 1.4173 0.0000 4 6 2.8371 1.8650 -1.0385 5 6 3.3027 3.1665 -1.0412 6 6 2.9831 4.0178 0.0003 7 6 2.1928 3.5697 1.0416 8 6 1.7217 2.2687 1.0420 9 17 0.7298 1.7048 2.3504 10 6 2.0539 -0.7500 1.2400 11 6 2.8324 -1.9534 0.6548 12 6 2.2280 -2.0703 -0.7676 13 1 1.2812 -2.6097 -0.7392 14 6 3.1976 -2.7463 -1.7024 15 1 4.1310 -3.1357 -1.3232 16 6 2.8934 -2.8677 -3.0416 17 7 3.7399 -3.4572 -3.8575 18 14 1.2788 -2.1949 -3.6974 19 1 1.4667 -0.7846 -4.1228 20 1 0.8394 -3.0081 -4.8596 21 1 0.2472 -2.2572 -2.6311 22 8 2.0187 -0.6963 -1.1587 23 1 -0.3634 -1.0276 -0.0080 24 1 -0.3634 0.5069 0.8940 25 1 -0.3633 0.5208 -0.8859 26 1 3.0914 1.1990 -1.8497 27 1 3.9204 3.5171 -1.8548 28 1 3.3509 5.0333 -0.0001 29 1 1.9429 4.2350 1.8550 30 1 2.7196 -0.1104 1.8196 31 1 1.2236 -1.0956 1.8559 32 1 3.9002 -1.7400 0.6074 33 1 2.6431 -2.8575 1.2334 34 1 3.5257 -3.5430 -4.7996 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000390489860.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:06:57 Heat of formation + Delta-G solvation = -27.528691 kcal Electronic energy + Delta-G solvation = -18592.280807 eV Core-core repulsion = 15708.852280 eV Total energy + Delta-G solvation = -2883.428527 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 266.081 amu Computer time = 2.11 seconds Orbital eigenvalues (eV) -39.92930 -38.04345 -36.37707 -33.20251 -31.98375 -31.20392 -30.48323 -29.13382 -27.09102 -23.81701 -22.58065 -22.22888 -20.12700 -19.69405 -17.25195 -16.72235 -15.69622 -15.31489 -15.08663 -14.51013 -13.96721 -13.72684 -13.55360 -13.37663 -13.25749 -12.56494 -12.31045 -12.10794 -12.01251 -11.67189 -11.30248 -11.16310 -10.87709 -10.76253 -10.47579 -10.34830 -10.09194 -9.83369 -9.67782 -9.43694 -8.74200 -8.67449 -8.57716 -8.37396 -6.13173 -4.22025 1.27498 1.43952 2.22706 3.40270 3.45025 3.55460 3.77994 4.42928 4.55433 4.86413 5.00482 5.12757 5.29252 5.38056 5.42804 5.44026 5.60818 5.79248 5.81906 5.96494 6.00916 6.06302 6.20872 6.27763 6.42158 6.43003 6.49102 6.57834 6.63738 6.74160 6.77192 7.00041 7.16886 7.58490 8.14323 8.41951 8.87638 9.49435 10.97110 Molecular weight = 266.08amu Principal moments of inertia in cm(-1) A = 0.024228 B = 0.007475 C = 0.006672 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1155.424331 B = 3744.902767 C = 4195.406312 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.170 4.170 2 C 0.135 3.865 3 C -0.056 4.056 4 C -0.081 4.081 5 C -0.118 4.118 6 C -0.119 4.119 7 C -0.118 4.118 8 C -0.033 4.033 9 Cl -0.071 7.071 10 C -0.136 4.136 11 C -0.136 4.136 12 C 0.171 3.829 13 H 0.031 0.969 14 C -0.515 4.515 15 H 0.081 0.919 16 C 0.083 3.917 17 N -0.892 5.892 18 Si 0.899 3.101 19 H -0.274 1.274 20 H -0.299 1.299 21 H -0.266 1.266 22 O -0.368 6.368 23 H 0.061 0.939 24 H 0.072 0.928 25 H 0.055 0.945 26 H 0.148 0.852 27 H 0.127 0.873 28 H 0.126 0.874 29 H 0.128 0.872 30 H 0.066 0.934 31 H 0.069 0.931 32 H 0.070 0.930 33 H 0.064 0.936 34 H 0.266 0.734 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.761 13.068 9.985 17.121 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.228 4.228 2 C 0.094 3.906 3 C -0.057 4.057 4 C -0.099 4.099 5 C -0.136 4.136 6 C -0.137 4.137 7 C -0.136 4.136 8 C -0.060 4.060 9 Cl -0.042 7.042 10 C -0.174 4.174 11 C -0.174 4.174 12 C 0.116 3.884 13 H 0.049 0.951 14 C -0.552 4.552 15 H 0.099 0.901 16 C -0.121 4.121 17 N -0.529 5.529 18 Si 0.728 3.272 19 H -0.200 1.200 20 H -0.227 1.227 21 H -0.190 1.190 22 O -0.289 6.289 23 H 0.080 0.920 24 H 0.091 0.909 25 H 0.074 0.926 26 H 0.166 0.834 27 H 0.145 0.855 28 H 0.144 0.856 29 H 0.146 0.854 30 H 0.085 0.915 31 H 0.088 0.912 32 H 0.089 0.911 33 H 0.083 0.917 34 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges -4.779 13.043 9.727 16.958 hybrid contribution -0.863 0.269 -0.167 0.920 sum -5.642 13.311 9.560 17.333 Atomic orbital electron populations 1.22497 0.95008 1.02652 1.02598 1.20669 0.92971 0.88260 0.88686 1.19875 0.97160 0.95426 0.93213 1.21295 0.94786 0.95526 0.98278 1.21323 0.99856 0.93852 0.98603 1.21046 0.98701 0.99880 0.94080 1.20899 0.99222 0.93769 0.99754 1.20674 0.99325 0.94680 0.91306 1.98320 1.68588 1.89388 1.47951 1.22985 1.00008 0.97762 0.96650 1.23038 1.00337 0.96201 0.97822 1.21251 0.95483 0.79771 0.91926 0.95108 1.20927 1.05771 1.35750 0.92751 0.90093 1.25053 0.97162 0.93094 0.96815 1.69924 1.36204 1.42212 1.04568 0.86438 0.83944 0.79015 0.77804 1.19970 1.22686 1.19047 1.89037 1.84881 1.24144 1.30792 0.91992 0.90927 0.92619 0.83445 0.85534 0.85559 0.85362 0.91542 0.91220 0.91127 0.91679 0.92456 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -2.95 8.34 37.15 0.31 -2.64 16 2 C 0.13 2.54 0.87 -91.20 -0.08 2.47 16 3 C -0.06 -0.96 4.63 -104.59 -0.48 -1.45 16 4 C -0.08 -1.39 9.39 -39.59 -0.37 -1.76 16 5 C -0.12 -1.62 10.05 -39.57 -0.40 -2.02 16 6 C -0.12 -1.42 10.05 -39.59 -0.40 -1.82 16 7 C -0.12 -1.48 9.83 -39.55 -0.39 -1.87 16 8 C -0.03 -0.49 5.83 -39.50 -0.23 -0.72 16 9 Cl -0.07 -0.96 23.67 -51.86 -1.23 -2.18 16 10 C -0.14 -2.38 4.69 -25.20 -0.12 -2.50 16 11 C -0.14 -2.74 6.55 -24.72 -0.16 -2.90 16 12 C 0.17 4.08 2.48 -26.83 -0.07 4.02 16 13 H 0.03 0.76 7.33 -51.93 -0.38 0.38 16 14 C -0.52 -14.54 9.41 -34.44 -0.32 -14.86 16 15 H 0.08 2.43 8.02 -52.48 -0.42 2.01 16 16 C 0.08 2.42 5.47 -17.82 -0.10 2.32 16 17 N -0.89 -27.13 13.96 55.43 0.77 -26.36 16 18 Si 0.90 22.93 26.33 -169.99 -4.48 18.45 16 19 H -0.27 -7.00 7.11 56.52 0.40 -6.60 16 20 H -0.30 -7.53 7.11 56.52 0.40 -7.13 16 21 H -0.27 -6.58 6.59 56.52 0.37 -6.20 16 22 O -0.37 -8.53 6.97 -35.23 -0.25 -8.78 16 23 H 0.06 1.08 8.13 -51.93 -0.42 0.66 16 24 H 0.07 1.10 5.04 -51.92 -0.26 0.83 16 25 H 0.05 0.98 8.14 -51.93 -0.42 0.55 16 26 H 0.15 2.85 7.02 -52.49 -0.37 2.49 16 27 H 0.13 1.45 8.06 -52.49 -0.42 1.02 16 28 H 0.13 1.12 8.06 -52.48 -0.42 0.70 16 29 H 0.13 1.30 8.06 -52.48 -0.42 0.87 16 30 H 0.07 1.10 7.11 -51.93 -0.37 0.74 16 31 H 0.07 1.10 7.67 -51.93 -0.40 0.70 16 32 H 0.07 1.47 8.05 -51.93 -0.42 1.05 16 33 H 0.06 1.19 8.14 -51.93 -0.42 0.77 16 34 H 0.27 7.58 8.31 -40.82 -0.34 7.24 16 LS Contribution 286.46 15.07 4.32 4.32 Total: -1.00 -30.20 286.46 -7.98 -38.18 By element: Atomic # 1 Polarization: 4.41 SS G_CDS: -4.32 Total: 0.09 kcal Atomic # 6 Polarization: -20.92 SS G_CDS: -2.81 Total: -23.73 kcal Atomic # 7 Polarization: -27.13 SS G_CDS: 0.77 Total: -26.36 kcal Atomic # 8 Polarization: -8.53 SS G_CDS: -0.25 Total: -8.78 kcal Atomic # 14 Polarization: 22.93 SS G_CDS: -4.48 Total: 18.45 kcal Atomic # 17 Polarization: -0.96 SS G_CDS: -1.23 Total: -2.18 kcal Total LS contribution 4.32 Total: 4.32 kcal Total: -30.20 -7.98 -38.18 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000390489860.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 10.656 kcal (2) G-P(sol) polarization free energy of solvation -30.201 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -19.545 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.984 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.185 kcal (6) G-S(sol) free energy of system = (1) + (5) -27.529 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.11 seconds