Wall clock time and date at job start Mon Mar 30 2020 07:15:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 C 1.50699 * 109.47303 * 2 1 4 4 C 1.36233 * 120.03846 * 265.00164 * 3 2 1 5 5 C 1.40300 * 120.07659 * 179.97438 * 4 3 2 6 6 C 1.46864 * 119.91896 * 179.97438 * 5 4 3 7 7 O 1.21310 * 119.99957 * 0.02562 * 6 5 4 8 8 C 1.50696 * 119.99615 * 180.02562 * 6 5 4 9 9 C 1.53004 * 109.46843 * 180.02562 * 8 6 5 10 10 Cl 1.80306 * 109.46957 * 179.97438 * 9 8 6 11 11 C 1.40329 * 120.15398 * 0.27509 * 5 4 3 12 12 C 1.36192 * 120.08138 * 359.48277 * 11 5 4 13 13 C 1.40946 * 120.04276 * 85.01649 * 3 2 1 14 14 C 1.40994 * 120.07365 * 0.02562 * 13 3 2 15 15 H 1.08004 * 119.99914 * 333.84319 * 14 13 3 16 16 C 1.40328 * 120.00095 * 153.84380 * 14 13 3 17 17 N 1.30586 * 120.00259 * 343.69311 * 16 14 13 18 18 Si 1.86799 * 120.00159 * 163.69310 * 16 14 13 19 19 H 1.48499 * 109.46990 * 0.02562 * 18 16 14 20 20 H 1.48497 * 109.47384 * 119.99981 * 18 16 14 21 21 H 1.48502 * 109.46971 * 240.00088 * 18 16 14 22 22 H 1.09006 * 109.47164 * 300.00486 * 1 2 3 23 23 H 1.09005 * 109.46708 * 59.99785 * 1 2 3 24 24 H 1.08995 * 109.47594 * 180.02562 * 1 2 3 25 25 H 1.08998 * 109.47110 * 239.99806 * 2 1 3 26 26 H 1.08997 * 109.46943 * 119.99614 * 2 1 3 27 27 H 1.07993 * 119.95942 * 0.02562 * 4 3 2 28 28 H 1.08994 * 109.47572 * 60.00291 * 8 6 5 29 29 H 1.09006 * 109.47487 * 299.99847 * 8 6 5 30 30 H 1.09000 * 109.47274 * 299.99584 * 9 8 6 31 31 H 1.09003 * 109.47413 * 60.00386 * 9 8 6 32 32 H 1.08004 * 119.95817 * 179.74497 * 11 5 4 33 33 H 1.08003 * 120.03920 * 180.25490 * 12 11 5 34 34 H 0.97000 * 120.00389 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0324 1.4208 0.0000 4 6 2.3566 2.0295 -1.1749 5 6 2.8239 3.3524 -1.1758 6 6 3.1730 4.0050 -2.4444 7 8 3.0567 3.4005 -3.4896 8 6 3.6756 5.4257 -2.4474 9 6 3.9632 5.8618 -3.8855 10 17 4.5638 7.5619 -3.8892 11 6 2.9645 4.0512 0.0329 12 6 2.6376 3.4506 1.2107 13 6 2.1677 2.1214 1.2155 14 6 1.8339 1.4943 2.4334 15 1 1.1105 0.6925 2.4474 16 6 2.4416 1.9120 3.6273 17 7 3.5255 2.6394 3.5887 18 14 1.7001 1.4277 5.2720 19 1 0.4830 0.6080 5.0440 20 1 2.6899 0.6381 6.0479 21 1 1.3383 2.6515 6.0314 22 1 -0.3634 0.5139 0.8900 23 1 -0.3633 0.5139 -0.8900 24 1 -0.3634 -1.0276 0.0005 25 1 1.8934 -0.5139 -0.8899 26 1 1.8933 -0.5138 0.8900 27 1 2.2530 1.4933 -2.1066 28 1 4.5905 5.4887 -1.8584 29 1 2.9188 6.0798 -2.0142 30 1 4.7198 5.2079 -4.3191 31 1 3.0480 5.7990 -4.4742 32 1 3.3284 5.0681 0.0288 33 1 2.7421 3.9904 2.1402 34 1 3.9457 2.9278 4.4139 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000396045459.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:15:44 Heat of formation + Delta-G solvation = -62.332418 kcal Electronic energy + Delta-G solvation = -17406.743918 eV Core-core repulsion = 14521.806188 eV Total energy + Delta-G solvation = -2884.937730 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 266.081 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -39.02337 -37.53763 -35.91310 -34.00452 -33.24542 -31.95236 -29.95317 -28.48323 -26.49591 -24.08245 -22.62990 -21.44758 -20.18198 -18.45788 -17.43222 -15.91708 -15.63265 -15.37541 -14.78022 -14.10205 -14.02112 -13.43557 -13.23803 -12.98875 -12.72223 -12.43829 -12.26035 -12.12505 -11.76762 -11.54725 -11.42630 -11.34835 -10.96993 -10.81613 -10.51415 -10.46665 -10.31067 -10.27221 -9.90232 -9.57397 -9.36810 -8.75248 -7.63827 -7.58340 -7.12720 -4.69463 1.88966 2.33019 2.78517 2.88998 2.94056 2.96095 3.46517 3.66271 4.40563 4.77508 5.03199 5.03960 5.40534 5.53923 5.84218 5.88289 5.89972 5.99511 6.14864 6.22489 6.28120 6.40091 6.53752 6.64144 6.70766 6.77053 6.96020 7.02470 7.16929 7.40943 7.67032 7.72199 7.82506 8.00246 8.31008 8.48469 8.53553 8.67605 9.77104 Molecular weight = 266.08amu Principal moments of inertia in cm(-1) A = 0.023692 B = 0.004694 C = 0.004005 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1181.558734 B = 5963.811012 C = 6989.744371 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C -0.060 4.060 3 C -0.207 4.207 4 C -0.016 4.016 5 C -0.314 4.314 6 C 0.403 3.597 7 O -0.512 6.512 8 C -0.174 4.174 9 C -0.013 4.013 10 Cl -0.201 7.201 11 C -0.055 4.055 12 C -0.181 4.181 13 C 0.138 3.862 14 C -0.430 4.430 15 H 0.091 0.909 16 C 0.073 3.927 17 N -0.764 5.764 18 Si 0.912 3.088 19 H -0.256 1.256 20 H -0.270 1.270 21 H -0.268 1.268 22 H 0.057 0.943 23 H 0.045 0.955 24 H 0.040 0.960 25 H 0.046 0.954 26 H 0.065 0.935 27 H 0.098 0.902 28 H 0.101 0.899 29 H 0.101 0.899 30 H 0.096 0.904 31 H 0.096 0.904 32 H 0.095 0.905 33 H 0.120 0.880 34 H 0.288 0.712 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.775 2.657 -2.779 3.923 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.200 4.200 2 C -0.097 4.097 3 C -0.208 4.208 4 C -0.034 4.034 5 C -0.316 4.316 6 C 0.289 3.711 7 O -0.396 6.396 8 C -0.212 4.212 9 C -0.076 4.076 10 Cl -0.174 7.174 11 C -0.074 4.074 12 C -0.200 4.200 13 C 0.135 3.865 14 C -0.457 4.457 15 H 0.109 0.891 16 C -0.149 4.149 17 N -0.387 5.387 18 Si 0.735 3.265 19 H -0.179 1.179 20 H -0.196 1.196 21 H -0.193 1.193 22 H 0.076 0.924 23 H 0.064 0.936 24 H 0.059 0.941 25 H 0.065 0.935 26 H 0.084 0.916 27 H 0.117 0.883 28 H 0.120 0.880 29 H 0.119 0.881 30 H 0.114 0.886 31 H 0.114 0.886 32 H 0.113 0.887 33 H 0.137 0.863 34 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges -0.598 2.598 -3.147 4.124 hybrid contribution -0.067 0.082 0.947 0.953 sum -0.665 2.680 -2.200 3.530 Atomic orbital electron populations 1.21746 0.96782 0.99781 1.01696 1.20131 0.94570 0.94255 1.00751 1.19417 1.12115 0.96074 0.93219 1.20369 0.93748 0.92959 0.96361 1.19326 1.21995 0.97610 0.92681 1.21937 0.73337 0.86929 0.88859 1.90418 1.47583 1.66609 1.34962 1.22303 1.04382 0.98340 0.96173 1.24185 1.02696 0.81332 0.99384 1.98697 1.90618 1.28937 1.99194 1.20640 0.96959 0.97377 0.92431 1.20994 1.06820 0.95369 0.96783 1.17680 0.86303 0.90801 0.91758 1.20002 1.19522 1.15292 0.90844 0.89124 1.26169 0.93523 0.93099 1.02150 1.69716 1.13096 1.24710 1.31192 0.86178 0.80458 0.79667 0.80195 1.17923 1.19553 1.19286 0.92434 0.93604 0.94119 0.93532 0.91594 0.88347 0.88025 0.88079 0.88567 0.88585 0.88698 0.86261 0.90074 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.47 9.78 37.16 0.36 -2.11 16 2 C -0.06 -1.16 5.39 -27.88 -0.15 -1.31 16 3 C -0.21 -4.67 5.15 -104.32 -0.54 -5.21 16 4 C -0.02 -0.35 9.14 -39.53 -0.36 -0.72 16 5 C -0.31 -6.78 5.89 -104.85 -0.62 -7.40 16 6 C 0.40 7.77 7.11 -30.82 -0.22 7.55 16 7 O -0.51 -10.88 15.95 5.53 0.09 -10.79 16 8 C -0.17 -2.61 4.41 -27.88 -0.12 -2.73 16 9 C -0.01 -0.18 5.95 37.16 0.22 0.04 16 10 Cl -0.20 -2.62 29.15 -51.86 -1.51 -4.13 16 11 C -0.06 -1.18 9.40 -39.53 -0.37 -1.55 16 12 C -0.18 -4.25 8.61 -39.28 -0.34 -4.58 16 13 C 0.14 3.31 5.56 -106.79 -0.59 2.71 16 14 C -0.43 -10.00 8.09 -37.75 -0.31 -10.30 16 15 H 0.09 2.01 6.06 -52.48 -0.32 1.70 16 16 C 0.07 1.61 5.16 -17.30 -0.09 1.52 16 17 N -0.76 -17.54 10.96 55.57 0.61 -16.93 16 18 Si 0.91 16.50 29.59 -169.99 -5.03 11.47 16 19 H -0.26 -4.60 7.11 56.52 0.40 -4.20 16 20 H -0.27 -4.86 7.11 56.52 0.40 -4.46 16 21 H -0.27 -4.80 7.11 56.52 0.40 -4.40 16 22 H 0.06 1.04 7.28 -51.93 -0.38 0.66 16 23 H 0.04 0.78 8.14 -51.93 -0.42 0.36 16 24 H 0.04 0.60 8.14 -51.93 -0.42 0.18 16 25 H 0.05 0.84 8.04 -51.93 -0.42 0.43 16 26 H 0.07 1.30 7.05 -51.93 -0.37 0.94 16 27 H 0.10 2.15 7.62 -52.49 -0.40 1.75 16 28 H 0.10 1.45 8.07 -51.93 -0.42 1.03 16 29 H 0.10 1.42 8.08 -51.93 -0.42 1.00 16 30 H 0.10 1.29 8.10 -51.93 -0.42 0.87 16 31 H 0.10 1.27 8.10 -51.93 -0.42 0.85 16 32 H 0.09 1.75 7.01 -52.48 -0.37 1.38 16 33 H 0.12 2.86 6.21 -52.48 -0.33 2.53 16 34 H 0.29 5.93 8.29 -40.82 -0.34 5.60 16 LS Contribution 302.80 15.07 4.56 4.56 Total: -1.00 -25.05 302.80 -8.64 -33.69 By element: Atomic # 1 Polarization: 10.45 SS G_CDS: -4.23 Total: 6.21 kcal Atomic # 6 Polarization: -20.96 SS G_CDS: -3.12 Total: -24.09 kcal Atomic # 7 Polarization: -17.54 SS G_CDS: 0.61 Total: -16.93 kcal Atomic # 8 Polarization: -10.88 SS G_CDS: 0.09 Total: -10.79 kcal Atomic # 14 Polarization: 16.50 SS G_CDS: -5.03 Total: 11.47 kcal Atomic # 17 Polarization: -2.62 SS G_CDS: -1.51 Total: -4.13 kcal Total LS contribution 4.56 Total: 4.56 kcal Total: -25.05 -8.64 -33.69 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000396045459.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -28.642 kcal (2) G-P(sol) polarization free energy of solvation -25.054 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -53.696 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.637 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.691 kcal (6) G-S(sol) free energy of system = (1) + (5) -62.332 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds