Wall clock time and date at job start Mon Mar 30 2020 07:15:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 C 1.50700 * 109.47453 * 2 1 4 4 C 1.38657 * 119.87508 * 90.00223 * 3 2 1 5 5 C 1.38613 * 120.49974 * 180.02562 * 4 3 2 6 6 C 1.37637 * 120.25218 * 0.02562 * 5 4 3 7 7 C 1.50697 * 120.13077 * 180.02562 * 6 5 4 8 8 H 1.08999 * 109.47360 * 215.00474 * 7 6 5 9 9 Cl 1.80300 * 109.47206 * 335.00556 * 7 6 5 10 10 C 1.50705 * 109.46828 * 95.00447 * 7 6 5 11 11 C 1.50697 * 119.99598 * 274.99989 * 10 7 6 12 12 O 1.20756 * 119.99824 * 95.00307 * 10 7 6 13 13 C 1.40697 * 119.74178 * 359.97438 * 6 5 4 14 14 C 1.41399 * 120.24779 * 179.97438 * 13 6 5 15 15 H 1.08004 * 119.99427 * 333.57775 * 14 13 6 16 16 C 1.39940 * 120.00492 * 153.57922 * 14 13 6 17 17 N 1.30821 * 119.99848 * 344.22579 * 16 14 13 18 18 Si 1.86799 * 120.00177 * 164.22572 * 16 14 13 19 19 H 1.48510 * 109.46927 * 359.97438 * 18 16 14 20 20 H 1.48499 * 109.47238 * 119.99953 * 18 16 14 21 21 H 1.48498 * 109.47476 * 240.00286 * 18 16 14 22 22 C 1.37593 * 119.87537 * 270.00575 * 3 2 1 23 23 H 1.09002 * 109.47492 * 59.99779 * 1 2 3 24 24 H 1.09003 * 109.47673 * 180.02562 * 1 2 3 25 25 H 1.09008 * 109.46645 * 300.00108 * 1 2 3 26 26 H 1.08997 * 109.47069 * 240.00163 * 2 1 3 27 27 H 1.09002 * 109.47492 * 120.00221 * 2 1 3 28 28 H 1.08004 * 119.74829 * 0.27326 * 4 3 2 29 29 H 1.08002 * 119.87470 * 180.02562 * 5 4 3 30 30 H 1.08997 * 109.47146 * 90.00182 * 11 10 7 31 31 H 1.08999 * 109.46932 * 210.00152 * 11 10 7 32 32 H 1.09001 * 109.47514 * 330.00040 * 11 10 7 33 33 H 0.97002 * 119.99864 * 179.97438 * 17 16 14 34 34 H 1.08001 * 120.12818 * 0.02562 * 22 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0324 1.4208 0.0000 4 6 2.2627 2.0719 1.2023 5 6 2.7242 3.3788 1.2174 6 6 2.9587 4.0452 0.0361 7 6 3.4610 5.4658 0.0558 8 1 3.0293 6.0155 -0.7806 9 17 2.9789 6.2524 1.6048 10 6 4.9634 5.4690 -0.0630 11 6 5.8168 5.3028 1.1679 12 8 5.4833 5.6047 -1.1444 13 6 2.7285 3.3944 -1.1899 14 6 2.9652 4.0689 -2.4098 15 1 2.9035 5.1464 -2.4518 16 6 3.2795 3.3406 -3.5627 17 7 3.6565 2.0917 -3.4649 18 14 3.1608 4.1516 -5.2412 19 1 2.7142 5.5589 -5.0805 20 1 4.4921 4.1262 -5.8986 21 1 2.1809 3.4146 -6.0790 22 6 2.2607 2.0670 -1.1931 23 1 -0.3634 0.5139 -0.8900 24 1 -0.3634 -1.0277 0.0005 25 1 -0.3633 0.5139 0.8901 26 1 1.8933 -0.5138 -0.8900 27 1 1.8933 -0.5139 0.8900 28 1 2.0848 1.5555 2.1341 29 1 2.9006 3.8762 2.1597 30 1 6.0143 4.2436 1.3328 31 1 6.7601 5.8311 1.0300 32 1 5.2932 5.7134 2.0313 33 1 3.8739 1.5867 -4.2640 34 1 2.0802 1.5581 -2.1284 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000396045674.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:15:16 Heat of formation + Delta-G solvation = -49.069667 kcal Electronic energy + Delta-G solvation = -18117.806803 eV Core-core repulsion = 15233.444189 eV Total energy + Delta-G solvation = -2884.362614 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 266.081 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -39.05902 -37.78620 -35.54712 -34.20879 -33.19046 -30.70380 -29.78189 -28.93161 -26.35190 -25.14304 -22.47703 -21.21469 -19.73250 -18.75530 -17.04799 -15.73243 -15.40018 -15.18598 -14.85444 -14.24619 -14.13256 -13.54765 -13.07866 -12.96831 -12.67609 -12.18579 -12.08800 -11.87804 -11.66822 -11.57682 -11.31167 -11.16034 -11.01982 -10.70297 -10.57923 -10.39688 -10.31732 -10.03848 -9.62427 -9.33701 -9.24980 -9.01392 -7.47698 -7.34685 -6.83842 -4.47583 2.17145 2.69386 2.88345 2.93879 3.05893 3.11332 3.17834 3.90188 4.48107 4.63295 5.32542 5.54303 5.58419 5.66999 5.73972 5.78824 5.89738 6.03735 6.06744 6.22504 6.35076 6.37371 6.39304 6.51189 6.62101 6.75571 6.99851 7.16764 7.25923 7.47684 7.71924 7.87935 8.00509 8.01421 8.15836 8.49094 8.75460 8.81282 10.09204 Molecular weight = 266.08amu Principal moments of inertia in cm(-1) A = 0.012196 B = 0.010643 C = 0.006465 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2295.250287 B = 2630.277734 C = 4330.123076 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.140 4.140 2 C -0.078 4.078 3 C -0.064 4.064 4 C -0.237 4.237 5 C -0.064 4.064 6 C -0.231 4.231 7 C 0.038 3.962 8 H 0.119 0.881 9 Cl -0.191 7.191 10 C 0.367 3.633 11 C -0.205 4.205 12 O -0.437 6.437 13 C 0.130 3.870 14 C -0.451 4.451 15 H 0.080 0.920 16 C 0.081 3.919 17 N -0.787 5.787 18 Si 0.907 3.093 19 H -0.259 1.259 20 H -0.273 1.273 21 H -0.272 1.272 22 C -0.152 4.152 23 H 0.053 0.947 24 H 0.044 0.956 25 H 0.051 0.949 26 H 0.061 0.939 27 H 0.055 0.945 28 H 0.089 0.911 29 H 0.101 0.899 30 H 0.095 0.905 31 H 0.079 0.921 32 H 0.089 0.911 33 H 0.281 0.719 34 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.948 1.158 5.325 5.531 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.198 4.198 2 C -0.116 4.116 3 C -0.064 4.064 4 C -0.256 4.256 5 C -0.082 4.082 6 C -0.233 4.233 7 C -0.006 4.006 8 H 0.137 0.863 9 Cl -0.164 7.164 10 C 0.240 3.760 11 C -0.263 4.263 12 O -0.309 6.309 13 C 0.127 3.873 14 C -0.480 4.480 15 H 0.098 0.902 16 C -0.138 4.138 17 N -0.412 5.412 18 Si 0.731 3.269 19 H -0.182 1.182 20 H -0.198 1.198 21 H -0.197 1.197 22 C -0.171 4.171 23 H 0.073 0.927 24 H 0.063 0.937 25 H 0.070 0.930 26 H 0.080 0.920 27 H 0.074 0.926 28 H 0.107 0.893 29 H 0.119 0.881 30 H 0.113 0.887 31 H 0.098 0.902 32 H 0.108 0.892 33 H 0.092 0.908 34 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -0.610 1.099 4.704 4.870 hybrid contribution -0.048 0.250 -0.628 0.678 sum -0.658 1.350 4.077 4.344 Atomic orbital electron populations 1.21701 0.95968 1.00182 1.01932 1.20428 0.95194 0.94782 1.01178 1.19542 0.98679 0.94348 0.93860 1.20213 1.13867 0.95808 0.95735 1.20459 0.97648 0.94080 0.96001 1.18977 1.16539 0.93227 0.94571 1.23363 0.94703 0.96373 0.86158 0.86304 1.98649 1.93120 1.83225 1.41426 1.24476 0.90683 0.70613 0.90183 1.22294 1.00557 1.04680 0.98725 1.90425 1.74962 1.35139 1.30335 1.17325 0.87302 0.91817 0.90880 1.19598 1.40938 0.94835 0.92624 0.90194 1.25857 0.91969 0.94540 1.01460 1.69810 1.30444 1.09314 1.31594 0.86263 0.78769 0.80744 0.81097 1.18235 1.19808 1.19698 1.21150 1.03809 0.95938 0.96233 0.92743 0.93699 0.93003 0.91985 0.92588 0.89255 0.88128 0.88672 0.90226 0.89228 0.90773 0.86145 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.23 9.89 37.15 0.37 -1.86 16 2 C -0.08 -1.42 6.06 -27.89 -0.17 -1.59 16 3 C -0.06 -1.39 5.13 -104.70 -0.54 -1.93 16 4 C -0.24 -5.00 9.70 -39.29 -0.38 -5.38 16 5 C -0.06 -1.34 9.15 -39.66 -0.36 -1.70 16 6 C -0.23 -5.20 5.06 -103.92 -0.53 -5.73 16 7 C 0.04 0.76 2.89 -29.03 -0.08 0.67 16 8 H 0.12 2.48 6.49 -51.93 -0.34 2.14 16 9 Cl -0.19 -3.22 24.83 -51.86 -1.29 -4.50 16 10 C 0.37 7.26 6.37 -29.03 -0.18 7.07 16 11 C -0.21 -3.19 10.11 36.00 0.36 -2.82 16 12 O -0.44 -10.05 17.79 6.00 0.11 -9.94 16 13 C 0.13 3.26 5.56 -106.82 -0.59 2.66 16 14 C -0.45 -11.52 8.40 -37.74 -0.32 -11.84 16 15 H 0.08 2.01 6.37 -52.48 -0.33 1.68 16 16 C 0.08 1.99 5.17 -17.34 -0.09 1.90 16 17 N -0.79 -19.88 10.97 55.55 0.61 -19.27 16 18 Si 0.91 18.90 29.59 -169.99 -5.03 13.87 16 19 H -0.26 -5.37 7.11 56.52 0.40 -4.97 16 20 H -0.27 -5.70 7.11 56.52 0.40 -5.29 16 21 H -0.27 -5.48 7.11 56.52 0.40 -5.08 16 22 C -0.15 -3.73 8.32 -38.87 -0.32 -4.05 16 23 H 0.05 0.90 8.14 -51.93 -0.42 0.48 16 24 H 0.04 0.60 8.14 -51.93 -0.42 0.17 16 25 H 0.05 0.80 8.14 -51.92 -0.42 0.38 16 26 H 0.06 1.13 8.08 -51.93 -0.42 0.71 16 27 H 0.06 0.93 8.08 -51.93 -0.42 0.51 16 28 H 0.09 1.69 8.06 -52.48 -0.42 1.27 16 29 H 0.10 1.90 6.62 -52.49 -0.35 1.56 16 30 H 0.09 1.46 8.14 -51.93 -0.42 1.04 16 31 H 0.08 1.09 8.14 -51.93 -0.42 0.67 16 32 H 0.09 1.25 6.30 -51.93 -0.33 0.92 16 33 H 0.28 6.49 8.30 -40.82 -0.34 6.15 16 34 H 0.12 3.08 6.23 -52.49 -0.33 2.75 16 LS Contribution 301.54 15.07 4.54 4.54 Total: -1.00 -26.74 301.54 -8.08 -34.81 By element: Atomic # 1 Polarization: 9.26 SS G_CDS: -4.18 Total: 5.08 kcal Atomic # 6 Polarization: -21.75 SS G_CDS: -2.84 Total: -24.59 kcal Atomic # 7 Polarization: -19.88 SS G_CDS: 0.61 Total: -19.27 kcal Atomic # 8 Polarization: -10.05 SS G_CDS: 0.11 Total: -9.94 kcal Atomic # 14 Polarization: 18.90 SS G_CDS: -5.03 Total: 13.87 kcal Atomic # 17 Polarization: -3.22 SS G_CDS: -1.29 Total: -4.50 kcal Total LS contribution 4.54 Total: 4.54 kcal Total: -26.74 -8.08 -34.81 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000396045674.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -14.257 kcal (2) G-P(sol) polarization free energy of solvation -26.736 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -40.993 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.077 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.813 kcal (6) G-S(sol) free energy of system = (1) + (5) -49.070 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds