Wall clock time and date at job start Mon Mar 30 2020 07:16:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 C 1.50697 * 109.47589 * 2 1 4 4 C 1.36229 * 120.03917 * 265.00133 * 3 2 1 5 5 C 1.40297 * 120.07897 * 180.02562 * 4 3 2 6 6 C 1.46864 * 119.92076 * 180.02562 * 5 4 3 7 7 O 1.21307 * 120.00151 * 359.97438 * 6 5 4 8 8 C 1.50708 * 119.99830 * 179.97438 * 6 5 4 9 9 H 1.08998 * 109.46684 * 35.00292 * 8 6 5 10 10 C 1.53001 * 109.47088 * 275.00251 * 8 6 5 11 11 Cl 1.80301 * 109.46996 * 155.00248 * 8 6 5 12 12 C 1.40336 * 120.15384 * 0.02562 * 5 4 3 13 13 C 1.36183 * 120.08122 * 359.97438 * 12 5 4 14 14 C 1.40946 * 120.04165 * 85.01723 * 3 2 1 15 15 C 1.40989 * 120.07320 * 359.96463 * 14 3 2 16 16 H 1.07998 * 120.00660 * 333.82895 * 15 14 3 17 17 C 1.40336 * 120.00062 * 153.83286 * 15 14 3 18 18 N 1.30583 * 119.99778 * 343.74404 * 17 15 14 19 19 Si 1.86793 * 120.00275 * 163.74026 * 17 15 14 20 20 H 1.48496 * 109.47087 * 59.99944 * 19 17 15 21 21 H 1.48500 * 109.47350 * 179.97438 * 19 17 15 22 22 H 1.48502 * 109.47240 * 300.00270 * 19 17 15 23 23 H 1.09001 * 109.47477 * 180.02562 * 1 2 3 24 24 H 1.09003 * 109.47038 * 300.00338 * 1 2 3 25 25 H 1.09003 * 109.47547 * 59.99872 * 1 2 3 26 26 H 1.09003 * 109.47038 * 239.99662 * 2 1 3 27 27 H 1.09001 * 109.46810 * 120.00130 * 2 1 3 28 28 H 1.08003 * 119.96144 * 0.04367 * 4 3 2 29 29 H 1.09002 * 109.47287 * 59.99824 * 10 8 6 30 30 H 1.08996 * 109.47321 * 180.02562 * 10 8 6 31 31 H 1.09005 * 109.47090 * 300.00214 * 10 8 6 32 32 H 1.07996 * 119.95814 * 179.71868 * 12 5 4 33 33 H 1.08001 * 120.04083 * 179.97438 * 13 12 5 34 34 H 0.97001 * 120.00410 * 179.97438 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0324 1.4207 0.0000 4 6 2.3566 2.0294 -1.1748 5 6 2.8250 3.3519 -1.1757 6 6 3.1730 4.0049 -2.4444 7 8 3.0558 3.4007 -3.4897 8 6 3.6757 5.4257 -2.4474 9 1 4.2823 5.5983 -1.5585 10 6 2.4860 6.3876 -2.4477 11 17 4.6757 5.7061 -3.9213 12 6 2.9617 4.0522 0.0327 13 6 2.6394 3.4499 1.2108 14 6 2.1677 2.1213 1.2155 15 6 1.8327 1.4947 2.4332 16 1 1.1084 0.6937 2.4471 17 6 2.4404 1.9118 3.6275 18 7 3.5245 2.6387 3.5892 19 14 1.6984 1.4272 5.2718 20 1 1.6666 -0.0532 5.3835 21 1 2.5232 1.9885 6.3718 22 1 0.3158 1.9606 5.3675 23 1 -0.3634 -1.0277 0.0005 24 1 -0.3633 0.5139 0.8900 25 1 -0.3634 0.5139 -0.8900 26 1 1.8933 -0.5139 -0.8900 27 1 1.8932 -0.5139 0.8900 28 1 2.2527 1.4934 -2.1067 29 1 1.8814 6.2181 -1.5568 30 1 2.8495 7.4152 -2.4504 31 1 1.8793 6.2149 -3.3367 32 1 3.3268 5.0685 0.0287 33 1 2.7452 3.9893 2.1405 34 1 3.9444 2.9273 4.4146 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000396049482.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:16:19 Heat of formation + Delta-G solvation = -56.191704 kcal Electronic energy + Delta-G solvation = -17697.145094 eV Core-core repulsion = 14812.473646 eV Total energy + Delta-G solvation = -2884.671448 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 266.081 amu Computer time = 1.58 seconds Orbital eigenvalues (eV) -39.03025 -37.51300 -35.61206 -34.04216 -33.37926 -32.04383 -29.91288 -28.47954 -26.39453 -24.23814 -22.68607 -21.64417 -20.21117 -18.46288 -17.46413 -16.21082 -15.64226 -15.09290 -14.33823 -14.10478 -14.07427 -13.82530 -13.08193 -12.83632 -12.49989 -12.34417 -12.11255 -12.07690 -11.80875 -11.58968 -11.48932 -11.35498 -10.99088 -10.85346 -10.54404 -10.44841 -10.33251 -10.16703 -9.92876 -9.58421 -9.39515 -8.71874 -7.67248 -7.61871 -7.15276 -4.72196 1.81702 2.43048 2.80984 2.86879 2.89278 2.92676 3.44638 3.64213 4.36811 4.59020 5.09179 5.20604 5.39577 5.69228 5.79315 5.83452 5.87462 6.02282 6.17281 6.20331 6.25621 6.32716 6.52859 6.62529 6.68213 6.74122 6.93178 7.00146 7.13587 7.37174 7.62793 7.68284 7.78567 7.97129 8.27087 8.44515 8.50392 8.64013 9.74526 Molecular weight = 266.08amu Principal moments of inertia in cm(-1) A = 0.024970 B = 0.005357 C = 0.004652 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1121.067339 B = 5225.987434 C = 6017.497845 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C -0.060 4.060 3 C -0.205 4.205 4 C -0.014 4.014 5 C -0.309 4.309 6 C 0.395 3.605 7 O -0.484 6.484 8 C -0.045 4.045 9 H 0.118 0.882 10 C -0.147 4.147 11 Cl -0.175 7.175 12 C -0.059 4.059 13 C -0.178 4.178 14 C 0.138 3.862 15 C -0.428 4.428 16 H 0.091 0.909 17 C 0.073 3.927 18 N -0.764 5.764 19 Si 0.913 3.087 20 H -0.261 1.261 21 H -0.275 1.275 22 H -0.259 1.259 23 H 0.040 0.960 24 H 0.057 0.943 25 H 0.045 0.955 26 H 0.047 0.953 27 H 0.066 0.934 28 H 0.100 0.900 29 H 0.083 0.917 30 H 0.070 0.930 31 H 0.068 0.932 32 H 0.093 0.907 33 H 0.120 0.880 34 H 0.289 0.711 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.886 3.278 -0.733 3.852 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.200 4.200 2 C -0.098 4.098 3 C -0.206 4.206 4 C -0.032 4.032 5 C -0.312 4.312 6 C 0.279 3.721 7 O -0.365 6.365 8 C -0.089 4.089 9 H 0.136 0.864 10 C -0.204 4.204 11 Cl -0.148 7.148 12 C -0.078 4.078 13 C -0.197 4.197 14 C 0.134 3.866 15 C -0.455 4.455 16 H 0.109 0.891 17 C -0.150 4.150 18 N -0.386 5.386 19 Si 0.737 3.263 20 H -0.185 1.185 21 H -0.199 1.199 22 H -0.183 1.183 23 H 0.059 0.941 24 H 0.076 0.924 25 H 0.064 0.936 26 H 0.065 0.935 27 H 0.084 0.916 28 H 0.118 0.882 29 H 0.101 0.899 30 H 0.089 0.911 31 H 0.087 0.913 32 H 0.111 0.889 33 H 0.138 0.862 34 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -1.673 3.110 -1.222 3.737 hybrid contribution 0.011 0.048 0.858 0.859 sum -1.662 3.159 -0.364 3.588 Atomic orbital electron populations 1.21746 0.96751 0.99816 1.01702 1.20136 0.94590 0.94202 1.00826 1.19406 1.12012 0.96089 0.93142 1.20351 0.93595 0.92798 0.96480 1.19202 1.22310 0.97581 0.92068 1.21986 0.74476 0.86261 0.89389 1.90455 1.45934 1.65347 1.34726 1.24697 0.95812 0.98895 0.89542 0.86373 1.21971 0.96319 0.98124 1.04033 1.98697 1.73618 1.96834 1.45686 1.20619 0.97494 0.97194 0.92504 1.20982 1.06683 0.95343 0.96683 1.17673 0.86335 0.90799 0.91761 1.19948 1.19413 1.15305 0.90831 0.89150 1.26175 0.93523 0.93115 1.02164 1.69697 1.12987 1.24514 1.31440 0.86250 0.80356 0.80311 0.79420 1.18503 1.19938 1.18350 0.94090 0.92438 0.93577 0.93465 0.91558 0.88229 0.89867 0.91062 0.91314 0.88864 0.86172 0.89922 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.45 9.78 37.15 0.36 -2.09 16 2 C -0.06 -1.17 5.39 -27.89 -0.15 -1.32 16 3 C -0.21 -4.59 5.15 -104.32 -0.54 -5.13 16 4 C -0.01 -0.31 9.14 -39.53 -0.36 -0.67 16 5 C -0.31 -6.69 5.89 -104.84 -0.62 -7.31 16 6 C 0.40 8.00 6.26 -30.82 -0.19 7.81 16 7 O -0.48 -11.01 16.24 5.53 0.09 -10.92 16 8 C -0.04 -0.73 3.03 -27.88 -0.08 -0.82 16 9 H 0.12 1.77 6.71 -51.93 -0.35 1.43 16 10 C -0.15 -2.00 9.30 37.16 0.35 -1.65 16 11 Cl -0.17 -2.90 28.00 -51.86 -1.45 -4.36 16 12 C -0.06 -1.24 9.27 -39.53 -0.37 -1.61 16 13 C -0.18 -4.10 8.62 -39.28 -0.34 -4.44 16 14 C 0.14 3.26 5.56 -106.79 -0.59 2.67 16 15 C -0.43 -9.82 8.09 -37.75 -0.31 -10.13 16 16 H 0.09 1.97 6.06 -52.49 -0.32 1.65 16 17 C 0.07 1.59 5.16 -17.29 -0.09 1.50 16 18 N -0.76 -17.28 10.95 55.57 0.61 -16.68 16 19 Si 0.91 16.29 29.59 -169.99 -5.03 11.26 16 20 H -0.26 -4.63 7.11 56.52 0.40 -4.23 16 21 H -0.27 -4.80 7.11 56.52 0.40 -4.40 16 22 H -0.26 -4.61 7.11 56.52 0.40 -4.21 16 23 H 0.04 0.60 8.14 -51.93 -0.42 0.18 16 24 H 0.06 1.02 7.27 -51.93 -0.38 0.64 16 25 H 0.05 0.78 8.14 -51.93 -0.42 0.36 16 26 H 0.05 0.86 8.04 -51.93 -0.42 0.44 16 27 H 0.07 1.30 7.05 -51.93 -0.37 0.94 16 28 H 0.10 2.20 7.62 -52.48 -0.40 1.80 16 29 H 0.08 1.10 8.12 -51.93 -0.42 0.68 16 30 H 0.07 0.80 8.14 -51.93 -0.42 0.38 16 31 H 0.07 0.96 8.14 -51.93 -0.42 0.53 16 32 H 0.09 1.66 6.43 -52.49 -0.34 1.33 16 33 H 0.12 2.81 6.20 -52.49 -0.33 2.49 16 34 H 0.29 5.92 8.29 -40.82 -0.34 5.58 16 LS Contribution 301.12 15.07 4.54 4.54 Total: -1.00 -25.44 301.12 -8.31 -33.76 By element: Atomic # 1 Polarization: 9.71 SS G_CDS: -4.14 Total: 5.57 kcal Atomic # 6 Polarization: -20.25 SS G_CDS: -2.93 Total: -23.18 kcal Atomic # 7 Polarization: -17.28 SS G_CDS: 0.61 Total: -16.68 kcal Atomic # 8 Polarization: -11.01 SS G_CDS: 0.09 Total: -10.92 kcal Atomic # 14 Polarization: 16.29 SS G_CDS: -5.03 Total: 11.26 kcal Atomic # 17 Polarization: -2.90 SS G_CDS: -1.45 Total: -4.36 kcal Total LS contribution 4.54 Total: 4.54 kcal Total: -25.44 -8.31 -33.76 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000396049482.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -22.435 kcal (2) G-P(sol) polarization free energy of solvation -25.444 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -47.879 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.312 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.757 kcal (6) G-S(sol) free energy of system = (1) + (5) -56.192 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.58 seconds