Wall clock time and date at job start Mon Mar 30 2020 07:19:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.50709 * 109.47093 * 2 1 4 4 C 1.38053 * 119.98888 * 265.77420 * 3 2 1 5 5 C 1.38685 * 121.30071 * 180.30622 * 4 3 2 6 6 C 1.37542 * 121.22748 * 359.70112 * 5 4 3 7 7 C 1.40790 * 119.86338 * 0.02562 * 6 5 4 8 8 C 1.40727 * 120.61907 * 179.97438 * 7 6 5 9 9 H 1.07992 * 120.00248 * 151.13268 * 8 7 6 10 10 C 1.40394 * 120.00009 * 331.13687 * 8 7 6 11 11 N 1.30570 * 119.99784 * 347.24841 * 10 8 7 12 12 Si 1.86801 * 120.00042 * 167.25373 * 10 8 7 13 13 H 1.48499 * 109.47111 * 89.99788 * 12 10 8 14 14 H 1.48498 * 109.46846 * 209.99721 * 12 10 8 15 15 H 1.48498 * 109.46854 * 329.99563 * 12 10 8 16 16 C 1.39648 * 119.98772 * 85.52402 * 3 2 1 17 17 C 1.46607 * 120.59100 * 359.97438 * 16 3 2 18 18 O 1.21340 * 119.99939 * 266.85406 * 17 16 3 19 19 C 1.50694 * 119.99957 * 86.57435 * 17 16 3 20 20 C 1.52999 * 109.47157 * 185.70946 * 19 17 16 21 21 Cl 1.80304 * 109.47291 * 179.97438 * 20 19 17 22 22 H 1.08999 * 109.47197 * 59.99948 * 1 2 3 23 23 H 1.08994 * 109.46899 * 179.97438 * 1 2 3 24 24 H 1.09002 * 109.46964 * 299.99569 * 1 2 3 25 25 H 1.09006 * 109.47389 * 240.00193 * 2 1 3 26 26 H 1.08999 * 109.47197 * 120.00052 * 2 1 3 27 27 H 1.07995 * 119.35032 * 0.02562 * 4 3 2 28 28 H 1.08001 * 119.38108 * 179.71884 * 5 4 3 29 29 H 1.08006 * 120.06648 * 180.02562 * 6 5 4 30 30 H 0.97001 * 119.99708 * 180.02562 * 11 10 8 31 31 H 1.09002 * 109.47213 * 305.70546 * 19 17 16 32 32 H 1.08996 * 109.47421 * 65.70436 * 19 17 16 33 33 H 1.08994 * 109.47485 * 299.99618 * 20 19 17 34 34 H 1.09000 * 109.47344 * 60.00211 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0323 1.4209 0.0000 4 6 2.3454 2.0421 -1.1925 5 6 2.8157 3.3464 -1.2237 6 6 2.9821 4.0723 -0.0673 7 6 2.6728 3.4899 1.1766 8 6 2.8376 4.2178 2.3697 9 1 2.2112 4.0047 3.2232 10 6 3.8163 5.2212 2.4503 11 7 4.7322 5.3156 1.5246 12 14 3.8082 6.4209 3.8821 13 1 4.6320 5.8746 4.9904 14 1 4.3722 7.7218 3.4410 15 1 2.4140 6.6199 4.3532 16 6 2.1760 2.1104 1.2058 17 6 1.8415 1.4648 2.4789 18 8 0.7316 1.5948 2.9518 19 6 2.8740 0.6347 3.1969 20 6 2.2329 -0.0362 4.4134 21 17 3.4681 -1.0301 5.2721 22 1 -0.3633 0.5138 -0.8900 23 1 -0.3633 -1.0276 -0.0005 24 1 -0.3633 0.5138 0.8900 25 1 1.8934 -0.5138 -0.8900 26 1 1.8933 -0.5138 0.8900 27 1 2.2260 1.5002 -2.1189 28 1 3.0555 3.8006 -2.1737 29 1 3.3493 5.0869 -0.1134 30 1 5.4086 6.0087 1.5805 31 1 3.2594 -0.1294 2.5218 32 1 3.6920 1.2760 3.5247 33 1 1.8475 0.7277 5.0886 34 1 1.4149 -0.6777 4.0856 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000396051229.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:19:56 Heat of formation + Delta-G solvation = -56.822565 kcal Electronic energy + Delta-G solvation = -17999.117841 eV Core-core repulsion = 15114.419036 eV Total energy + Delta-G solvation = -2884.698804 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 266.081 amu Computer time = 1.97 seconds Orbital eigenvalues (eV) -39.11721 -37.05067 -35.82873 -34.44720 -32.67638 -31.95396 -30.03897 -28.49736 -25.84254 -24.33407 -23.03427 -21.37746 -20.12869 -18.60115 -17.06212 -15.98305 -15.66494 -15.19839 -14.77251 -14.27849 -14.24934 -13.27151 -13.14377 -12.99451 -12.76623 -12.55697 -12.25517 -12.14867 -11.76850 -11.48259 -11.33192 -11.29874 -10.98269 -10.79984 -10.53470 -10.42974 -10.40281 -10.17802 -9.99088 -9.66445 -9.38825 -8.72322 -7.48466 -7.45398 -6.95936 -4.59883 2.35875 2.56850 2.72518 2.77855 2.97445 3.02194 3.10704 3.78941 4.43464 4.83560 5.07719 5.12398 5.37259 5.49582 5.51998 5.62062 5.91065 5.97147 6.11218 6.17480 6.21332 6.27558 6.35808 6.42449 6.61521 6.68513 6.83725 7.05938 7.09862 7.36462 7.69162 7.81962 7.94675 8.01932 8.25669 8.41875 8.61149 8.74276 9.96196 Molecular weight = 266.08amu Principal moments of inertia in cm(-1) A = 0.012352 B = 0.008839 C = 0.005763 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2266.273987 B = 3167.196759 C = 4857.167302 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.146 4.146 2 C -0.085 4.085 3 C -0.022 4.022 4 C -0.240 4.240 5 C -0.087 4.087 6 C -0.168 4.168 7 C 0.150 3.850 8 C -0.458 4.458 9 H 0.080 0.920 10 C 0.079 3.921 11 N -0.781 5.781 12 Si 0.909 3.091 13 H -0.266 1.266 14 H -0.273 1.273 15 H -0.258 1.258 16 C -0.283 4.283 17 C 0.452 3.548 18 O -0.478 6.478 19 C -0.179 4.179 20 C -0.016 4.016 21 Cl -0.199 7.199 22 H 0.054 0.946 23 H 0.046 0.954 24 H 0.060 0.940 25 H 0.063 0.937 26 H 0.056 0.944 27 H 0.090 0.910 28 H 0.089 0.911 29 H 0.120 0.880 30 H 0.285 0.715 31 H 0.101 0.899 32 H 0.114 0.886 33 H 0.098 0.902 34 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.215 -6.052 1.407 6.331 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.203 4.203 2 C -0.122 4.122 3 C -0.022 4.022 4 C -0.260 4.260 5 C -0.106 4.106 6 C -0.187 4.187 7 C 0.147 3.853 8 C -0.487 4.487 9 H 0.098 0.902 10 C -0.141 4.141 11 N -0.405 5.405 12 Si 0.732 3.268 13 H -0.191 1.191 14 H -0.198 1.198 15 H -0.182 1.182 16 C -0.285 4.285 17 C 0.330 3.670 18 O -0.354 6.354 19 C -0.217 4.217 20 C -0.078 4.078 21 Cl -0.172 7.172 22 H 0.073 0.927 23 H 0.065 0.935 24 H 0.079 0.921 25 H 0.082 0.918 26 H 0.075 0.925 27 H 0.108 0.892 28 H 0.107 0.893 29 H 0.138 0.862 30 H 0.096 0.904 31 H 0.119 0.881 32 H 0.132 0.868 33 H 0.117 0.883 34 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -1.491 -5.921 1.659 6.327 hybrid contribution 0.397 0.596 0.497 0.872 sum -1.094 -5.325 2.156 5.848 Atomic orbital electron populations 1.21746 0.95388 1.00504 1.02658 1.20536 0.95871 0.94533 1.01290 1.19182 0.97272 0.93448 0.92325 1.20011 1.13746 0.96825 0.95376 1.20690 0.98431 0.94381 0.97066 1.21236 1.06237 1.00141 0.91070 1.18351 0.86446 0.87346 0.93173 1.19561 1.15421 1.14719 0.98963 0.90211 1.25982 0.93849 0.96891 0.97425 1.69674 1.09934 1.28941 1.31972 0.86279 0.80101 0.79413 0.80988 1.19099 1.19784 1.18180 1.20694 1.20126 0.96018 0.91705 1.21842 0.85921 0.74891 0.84363 1.90450 1.24114 1.54633 1.66170 1.22467 1.01293 1.01215 0.96683 1.24225 0.91185 0.96515 0.95911 1.98695 1.62581 1.75008 1.80961 0.92728 0.93490 0.92087 0.91798 0.92506 0.89205 0.89272 0.86183 0.90355 0.88058 0.86827 0.88332 0.88825 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.34 9.89 37.16 0.37 -1.98 16 2 C -0.08 -1.45 5.60 -27.88 -0.16 -1.61 16 3 C -0.02 -0.46 5.17 -104.16 -0.54 -1.00 16 4 C -0.24 -5.09 9.62 -39.48 -0.38 -5.47 16 5 C -0.09 -1.94 9.97 -39.67 -0.40 -2.33 16 6 C -0.17 -4.13 8.67 -38.87 -0.34 -4.46 16 7 C 0.15 3.78 5.70 -104.60 -0.60 3.18 16 8 C -0.46 -11.52 8.55 -37.83 -0.32 -11.85 16 9 H 0.08 2.01 7.46 -52.49 -0.39 1.62 16 10 C 0.08 1.86 5.23 -17.28 -0.09 1.77 16 11 N -0.78 -18.82 10.97 55.57 0.61 -18.21 16 12 Si 0.91 17.89 29.58 -169.99 -5.03 12.86 16 13 H -0.27 -5.16 7.11 56.52 0.40 -4.76 16 14 H -0.27 -5.21 7.11 56.52 0.40 -4.81 16 15 H -0.26 -5.15 7.11 56.52 0.40 -4.75 16 16 C -0.28 -6.49 5.74 -102.60 -0.59 -7.08 16 17 C 0.45 9.32 4.16 -30.94 -0.13 9.19 16 18 O -0.48 -10.58 16.13 5.51 0.09 -10.49 16 19 C -0.18 -3.01 5.60 -27.89 -0.16 -3.17 16 20 C -0.02 -0.23 5.96 37.16 0.22 -0.01 16 21 Cl -0.20 -2.80 29.15 -51.86 -1.51 -4.31 16 22 H 0.05 0.86 8.14 -51.93 -0.42 0.44 16 23 H 0.05 0.63 8.14 -51.93 -0.42 0.21 16 24 H 0.06 1.10 7.45 -51.93 -0.39 0.71 16 25 H 0.06 0.98 8.06 -51.93 -0.42 0.56 16 26 H 0.06 0.92 6.40 -51.93 -0.33 0.59 16 27 H 0.09 1.69 8.06 -52.49 -0.42 1.27 16 28 H 0.09 1.76 8.06 -52.49 -0.42 1.34 16 29 H 0.12 3.03 6.33 -52.48 -0.33 2.70 16 30 H 0.29 6.23 8.29 -40.82 -0.34 5.89 16 31 H 0.10 1.56 7.37 -51.93 -0.38 1.18 16 32 H 0.11 1.99 8.14 -51.93 -0.42 1.57 16 33 H 0.10 1.46 8.04 -51.93 -0.42 1.04 16 34 H 0.09 1.28 8.14 -51.93 -0.42 0.85 16 LS Contribution 305.10 15.07 4.60 4.60 Total: -1.00 -26.04 305.10 -8.68 -34.71 By element: Atomic # 1 Polarization: 9.98 SS G_CDS: -4.33 Total: 5.64 kcal Atomic # 6 Polarization: -21.70 SS G_CDS: -3.10 Total: -24.81 kcal Atomic # 7 Polarization: -18.82 SS G_CDS: 0.61 Total: -18.21 kcal Atomic # 8 Polarization: -10.58 SS G_CDS: 0.09 Total: -10.49 kcal Atomic # 14 Polarization: 17.89 SS G_CDS: -5.03 Total: 12.86 kcal Atomic # 17 Polarization: -2.80 SS G_CDS: -1.51 Total: -4.31 kcal Total LS contribution 4.60 Total: 4.60 kcal Total: -26.04 -8.68 -34.71 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000396051229.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -22.109 kcal (2) G-P(sol) polarization free energy of solvation -26.036 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -48.145 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.678 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.714 kcal (6) G-S(sol) free energy of system = (1) + (5) -56.823 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.98 seconds