Wall clock time and date at job start Mon Mar 30 2020 07:16:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 C 1.50695 * 109.47341 * 2 1 4 4 C 1.38721 * 119.38809 * 90.00120 * 3 2 1 5 5 C 1.38012 * 121.30810 * 179.72328 * 4 3 2 6 6 C 1.39688 * 120.02194 * 0.25032 * 5 4 3 7 7 C 1.46600 * 120.59258 * 179.97438 * 6 5 4 8 8 O 1.21338 * 119.99973 * 282.23806 * 7 6 5 9 9 C 1.50702 * 119.99916 * 102.23563 * 7 6 5 10 10 H 1.09002 * 109.46929 * 152.74748 * 9 7 6 11 11 C 1.53000 * 109.46827 * 272.74428 * 9 7 6 12 12 Cl 1.80295 * 109.47157 * 32.74493 * 9 7 6 13 13 C 1.46630 * 118.82014 * 0.02562 * 6 5 4 14 14 C 1.40722 * 120.62148 * 180.02562 * 13 6 5 15 15 H 1.08008 * 120.00127 * 331.15846 * 14 13 6 16 16 C 1.40397 * 119.99958 * 151.14646 * 14 13 6 17 17 N 1.30556 * 119.99934 * 343.94979 * 16 14 13 18 18 Si 1.86805 * 119.99721 * 163.94610 * 16 14 13 19 19 H 1.48500 * 109.47237 * 0.02562 * 18 16 14 20 20 H 1.48500 * 109.46995 * 120.00476 * 18 16 14 21 21 H 1.48500 * 109.47180 * 240.00581 * 18 16 14 22 22 C 1.37512 * 119.38568 * 270.23921 * 3 2 1 23 23 H 1.09000 * 109.47472 * 180.02562 * 1 2 3 24 24 H 1.08997 * 109.46784 * 300.00670 * 1 2 3 25 25 H 1.09001 * 109.46869 * 60.00024 * 1 2 3 26 26 H 1.09006 * 109.47120 * 239.99798 * 2 1 3 27 27 H 1.09001 * 109.46869 * 119.99976 * 2 1 3 28 28 H 1.08003 * 119.34142 * 359.97438 * 4 3 2 29 29 H 1.08002 * 119.99061 * 180.27727 * 5 4 3 30 30 H 1.08995 * 109.47393 * 60.00182 * 11 9 7 31 31 H 1.09007 * 109.46756 * 180.02562 * 11 9 7 32 32 H 1.09001 * 109.47367 * 299.99965 * 11 9 7 33 33 H 0.97001 * 119.99329 * 179.97438 * 17 16 14 34 34 H 1.07999 * 120.06617 * 0.02562 * 22 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0324 1.4207 0.0000 4 6 2.2594 2.0625 1.2087 5 6 2.7246 3.3611 1.2549 6 6 2.9715 4.0576 0.0696 7 6 3.4652 5.4376 0.1041 8 8 2.7012 6.3495 0.3429 9 6 4.9217 5.7235 -0.1569 10 1 5.0273 6.7294 -0.5633 11 6 5.7049 5.6178 1.1532 12 17 5.5664 4.5263 -1.3409 13 6 2.7270 3.3845 -1.2099 14 6 2.9635 4.0503 -2.4269 15 1 2.8698 5.1249 -2.4816 16 6 3.3214 3.3178 -3.5699 17 7 3.7389 2.0864 -3.4518 18 14 3.2002 4.1051 -5.2596 19 1 2.7041 5.4980 -5.1222 20 1 4.5415 4.1184 -5.8968 21 1 2.2592 3.3249 -6.1028 22 6 2.2526 2.0586 -1.1982 23 1 -0.3634 -1.0276 0.0005 24 1 -0.3633 0.5139 0.8899 25 1 -0.3633 0.5138 -0.8900 26 1 1.8934 -0.5139 -0.8900 27 1 1.8933 -0.5138 0.8900 28 1 2.0721 1.5341 2.1318 29 1 2.8982 3.8387 2.2079 30 1 5.5993 4.6120 1.5595 31 1 6.7583 5.8251 0.9644 32 1 5.3151 6.3416 1.8689 33 1 3.9858 1.5803 -4.2416 34 1 2.0656 1.5425 -2.1283 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000396051818.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:16:22 Heat of formation + Delta-G solvation = -47.114080 kcal Electronic energy + Delta-G solvation = -18230.100288 eV Core-core repulsion = 15345.822475 eV Total energy + Delta-G solvation = -2884.277813 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 266.081 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -38.87431 -37.17260 -35.23813 -34.11133 -32.79379 -31.81706 -29.71291 -28.54297 -25.64104 -24.55782 -22.88037 -21.01119 -20.39826 -18.52384 -17.04797 -15.89177 -15.34767 -15.19116 -14.50284 -14.21088 -13.82094 -13.59739 -12.97038 -12.76348 -12.46397 -12.35894 -12.03631 -11.88343 -11.74800 -11.60116 -11.20599 -11.18532 -10.95810 -10.60296 -10.50209 -10.27910 -10.05615 -9.78176 -9.63560 -9.55942 -9.15554 -8.58003 -7.44038 -7.23266 -6.86337 -4.41250 2.36631 2.65208 2.87186 3.03601 3.09113 3.16116 3.20117 3.87162 4.52257 4.74686 5.22753 5.27340 5.45556 5.68177 5.71155 5.74666 5.90745 6.05471 6.12881 6.23506 6.37239 6.38014 6.44178 6.52138 6.66057 6.78437 6.94808 7.15417 7.20665 7.48831 7.75851 7.88121 8.05418 8.12462 8.20581 8.50789 8.72589 8.85920 10.06015 Molecular weight = 266.08amu Principal moments of inertia in cm(-1) A = 0.013115 B = 0.011294 C = 0.007137 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2134.492784 B = 2478.561384 C = 3922.331249 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C -0.080 4.080 3 C -0.053 4.053 4 C -0.245 4.245 5 C -0.048 4.048 6 C -0.291 4.291 7 C 0.447 3.553 8 O -0.474 6.474 9 C -0.062 4.062 10 H 0.106 0.894 11 C -0.146 4.146 12 Cl -0.117 7.117 13 C 0.162 3.838 14 C -0.434 4.434 15 H 0.075 0.925 16 C 0.087 3.913 17 N -0.773 5.773 18 Si 0.897 3.103 19 H -0.258 1.258 20 H -0.272 1.272 21 H -0.270 1.270 22 C -0.161 4.161 23 H 0.044 0.956 24 H 0.051 0.949 25 H 0.054 0.946 26 H 0.062 0.938 27 H 0.055 0.945 28 H 0.087 0.913 29 H 0.087 0.913 30 H 0.075 0.925 31 H 0.071 0.929 32 H 0.067 0.933 33 H 0.282 0.718 34 H 0.117 0.883 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.237 0.154 2.830 3.611 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.198 4.198 2 C -0.117 4.117 3 C -0.053 4.053 4 C -0.264 4.264 5 C -0.067 4.067 6 C -0.293 4.293 7 C 0.325 3.675 8 O -0.349 6.349 9 C -0.108 4.108 10 H 0.124 0.876 11 C -0.203 4.203 12 Cl -0.090 7.090 13 C 0.159 3.841 14 C -0.462 4.462 15 H 0.093 0.907 16 C -0.134 4.134 17 N -0.396 5.396 18 Si 0.721 3.279 19 H -0.181 1.181 20 H -0.197 1.197 21 H -0.195 1.195 22 C -0.180 4.180 23 H 0.063 0.937 24 H 0.070 0.930 25 H 0.073 0.927 26 H 0.080 0.920 27 H 0.074 0.926 28 H 0.106 0.894 29 H 0.105 0.895 30 H 0.094 0.906 31 H 0.090 0.910 32 H 0.086 0.914 33 H 0.093 0.907 34 H 0.134 0.866 Dipole moment (debyes) X Y Z Total from point charges 1.985 0.342 2.721 3.385 hybrid contribution 0.224 0.230 -0.884 0.941 sum 2.210 0.572 1.837 2.930 Atomic orbital electron populations 1.21706 0.96023 1.00138 1.01951 1.20471 0.95155 0.94946 1.01158 1.19446 0.98063 0.94107 0.93724 1.19919 1.14879 0.95939 0.95698 1.20322 0.97658 0.94205 0.94469 1.20657 1.18253 0.95622 0.94805 1.22178 0.87675 0.89439 0.68229 1.90474 1.58285 1.48725 1.37407 1.24541 0.96185 0.96171 0.93861 0.87623 1.21939 1.00001 1.03810 0.94594 1.98791 1.87714 1.61473 1.61007 1.18234 0.85759 0.90690 0.89407 1.19423 1.39061 0.94910 0.92812 0.90658 1.25822 0.92202 0.94409 1.00956 1.69700 1.28260 1.09597 1.32084 0.86411 0.78937 0.80997 0.81561 1.18131 1.19738 1.19547 1.21015 1.04961 0.96221 0.95848 0.93735 0.93025 0.92731 0.91978 0.92619 0.89432 0.89472 0.90639 0.90956 0.91386 0.90682 0.86557 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.27 9.90 37.16 0.37 -1.90 16 2 C -0.08 -1.46 6.03 -27.88 -0.17 -1.63 16 3 C -0.05 -1.17 5.12 -104.71 -0.54 -1.71 16 4 C -0.25 -5.31 9.61 -39.49 -0.38 -5.69 16 5 C -0.05 -1.07 9.80 -39.12 -0.38 -1.45 16 6 C -0.29 -6.88 5.09 -102.60 -0.52 -7.40 16 7 C 0.45 9.84 4.83 -30.94 -0.15 9.69 16 8 O -0.47 -11.26 17.86 5.51 0.10 -11.16 16 9 C -0.06 -1.14 3.75 -27.88 -0.10 -1.25 16 10 H 0.11 1.76 8.14 -51.93 -0.42 1.34 16 11 C -0.15 -2.15 9.30 37.16 0.35 -1.80 16 12 Cl -0.12 -2.39 24.50 -51.86 -1.27 -3.66 16 13 C 0.16 4.07 5.03 -104.60 -0.53 3.54 16 14 C -0.43 -10.77 5.98 -37.83 -0.23 -11.00 16 15 H 0.08 1.91 7.48 -52.48 -0.39 1.52 16 16 C 0.09 2.04 5.14 -17.28 -0.09 1.95 16 17 N -0.77 -18.48 11.16 55.57 0.62 -17.86 16 18 Si 0.90 18.14 29.59 -169.99 -5.03 13.11 16 19 H -0.26 -5.27 7.11 56.52 0.40 -4.87 16 20 H -0.27 -5.44 7.11 56.52 0.40 -5.04 16 21 H -0.27 -5.37 7.11 56.52 0.40 -4.97 16 22 C -0.16 -3.94 8.29 -38.87 -0.32 -4.26 16 23 H 0.04 0.60 8.14 -51.93 -0.42 0.18 16 24 H 0.05 0.82 8.14 -51.93 -0.42 0.40 16 25 H 0.05 0.92 8.14 -51.93 -0.42 0.49 16 26 H 0.06 1.13 8.07 -51.93 -0.42 0.71 16 27 H 0.06 0.93 8.07 -51.93 -0.42 0.51 16 28 H 0.09 1.70 8.06 -52.48 -0.42 1.28 16 29 H 0.09 1.73 8.06 -52.49 -0.42 1.31 16 30 H 0.07 1.16 8.14 -51.93 -0.42 0.73 16 31 H 0.07 0.90 8.14 -51.93 -0.42 0.48 16 32 H 0.07 0.91 8.14 -51.93 -0.42 0.48 16 33 H 0.28 6.19 8.29 -40.82 -0.34 5.85 16 34 H 0.12 2.92 6.46 -52.49 -0.34 2.58 16 LS Contribution 303.78 15.07 4.58 4.58 Total: -1.00 -26.69 303.78 -8.21 -34.90 By element: Atomic # 1 Polarization: 7.50 SS G_CDS: -4.51 Total: 3.00 kcal Atomic # 6 Polarization: -20.21 SS G_CDS: -2.69 Total: -22.90 kcal Atomic # 7 Polarization: -18.48 SS G_CDS: 0.62 Total: -17.86 kcal Atomic # 8 Polarization: -11.26 SS G_CDS: 0.10 Total: -11.16 kcal Atomic # 14 Polarization: 18.14 SS G_CDS: -5.03 Total: 13.11 kcal Atomic # 17 Polarization: -2.39 SS G_CDS: -1.27 Total: -3.66 kcal Total LS contribution 4.58 Total: 4.58 kcal Total: -26.69 -8.21 -34.90 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000396051818.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -12.214 kcal (2) G-P(sol) polarization free energy of solvation -26.694 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -38.908 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.206 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.901 kcal (6) G-S(sol) free energy of system = (1) + (5) -47.114 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds