Wall clock time and date at job start Mon Mar 30 2020 07:15:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 C 1.50707 * 109.47084 * 2 1 4 4 C 1.37633 * 120.12710 * 264.99819 * 3 2 1 5 5 C 1.38609 * 120.24765 * 179.97438 * 4 3 2 6 6 C 1.38647 * 120.50340 * 0.02562 * 5 4 3 7 7 C 1.37598 * 120.24851 * 359.97438 * 6 5 4 8 8 C 1.50697 * 120.12909 * 179.97438 * 7 6 5 9 9 H 1.08999 * 109.47129 * 340.96140 * 8 7 6 10 10 Cl 1.80300 * 109.47470 * 220.96272 * 8 7 6 11 11 C 1.50704 * 109.47295 * 100.96608 * 8 7 6 12 12 C 1.50706 * 119.99289 * 275.80646 * 11 8 7 13 13 O 1.20752 * 120.00146 * 95.80253 * 11 8 7 14 14 C 1.40691 * 120.12813 * 85.25173 * 3 2 1 15 15 C 1.41401 * 120.24310 * 0.02571 * 14 3 2 16 16 H 1.07999 * 120.00126 * 233.69465 * 15 14 3 17 17 C 1.39949 * 120.00057 * 53.70140 * 15 14 3 18 18 N 1.30820 * 119.99900 * 19.79549 * 17 15 14 19 19 Si 1.86803 * 119.99795 * 199.80170 * 17 15 14 20 20 H 1.48498 * 109.47075 * 89.99618 * 19 17 15 21 21 H 1.48497 * 109.46680 * 209.99857 * 19 17 15 22 22 H 1.48497 * 109.46902 * 329.99547 * 19 17 15 23 23 H 1.09007 * 109.47046 * 60.00263 * 1 2 3 24 24 H 1.09003 * 109.47329 * 179.97438 * 1 2 3 25 25 H 1.09002 * 109.47278 * 299.99950 * 1 2 3 26 26 H 1.09002 * 109.47278 * 240.00050 * 2 1 3 27 27 H 1.08995 * 109.47321 * 120.00093 * 2 1 3 28 28 H 1.08006 * 119.87891 * 359.97438 * 4 3 2 29 29 H 1.08008 * 119.74726 * 180.02562 * 5 4 3 30 30 H 1.08002 * 119.88098 * 180.02562 * 6 5 4 31 31 H 1.09000 * 109.46919 * 59.99982 * 12 11 8 32 32 H 1.09000 * 109.46509 * 179.97438 * 12 11 8 33 33 H 1.08998 * 109.47077 * 299.99263 * 12 11 8 34 34 H 0.97000 * 119.99729 * 183.21015 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0323 1.4209 0.0000 4 6 2.3604 2.0376 -1.1859 5 6 2.8222 3.3445 -1.1888 6 6 2.9595 4.0451 -0.0003 7 6 2.6374 3.4485 1.1971 8 6 2.7883 4.2123 2.4874 9 1 3.4588 5.0576 2.3330 10 17 3.4730 3.1255 3.7527 11 6 1.4398 4.7156 2.9339 12 6 0.8970 6.0079 2.3803 13 8 0.7943 4.0835 3.7350 14 6 2.1727 2.1203 1.2127 15 6 1.8443 1.4949 2.4376 16 1 1.1495 1.9676 3.1160 17 6 2.4196 0.2635 2.7710 18 7 3.5185 -0.1270 2.1781 19 14 1.6183 -0.8227 4.0623 20 1 0.6465 -1.7351 3.4079 21 1 2.6616 -1.6231 4.7523 22 1 0.9100 0.0267 5.0533 23 1 -0.3633 0.5138 -0.8901 24 1 -0.3634 -1.0277 -0.0005 25 1 -0.3634 0.5138 0.8900 26 1 1.8933 -0.5138 -0.8900 27 1 1.8933 -0.5138 0.8899 28 1 2.2577 1.5012 -2.1177 29 1 3.0769 3.8208 -2.1242 30 1 3.3198 5.0631 -0.0143 31 1 0.8030 5.9282 1.2973 32 1 -0.0822 6.2068 2.8160 33 1 1.5772 6.8231 2.6271 34 1 3.8917 -1.0004 2.3750 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000396053648.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:15:27 Heat of formation + Delta-G solvation = -29.295308 kcal Electronic energy + Delta-G solvation = -18747.299404 eV Core-core repulsion = 15863.794271 eV Total energy + Delta-G solvation = -2883.505133 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 266.081 amu Computer time = 0.48 seconds Orbital eigenvalues (eV) -39.09201 -37.84206 -34.77948 -33.97785 -32.64109 -31.13560 -29.78302 -28.54791 -26.41080 -24.84400 -22.62779 -20.72756 -19.67344 -18.64505 -17.13329 -15.66061 -15.05282 -15.00552 -14.84139 -14.23560 -14.17286 -13.60316 -12.76541 -12.67076 -12.49513 -12.18305 -12.03350 -11.76330 -11.68241 -11.37651 -11.16723 -11.08486 -10.86908 -10.60156 -10.35200 -9.98117 -9.83667 -9.79554 -9.58492 -9.15550 -8.89881 -8.32227 -7.43013 -6.99404 -6.53111 -4.15231 2.28282 2.72612 2.80725 3.21501 3.22432 3.29964 3.31729 4.18084 4.55158 4.81799 5.32498 5.39100 5.53339 5.60060 5.77413 5.82799 5.99685 6.01366 6.18726 6.23602 6.35470 6.48536 6.52949 6.73061 6.87881 7.05210 7.15561 7.28216 7.41249 7.62117 7.69172 7.77704 8.00645 8.15948 8.17544 8.68649 8.91733 9.08780 10.46715 Molecular weight = 266.08amu Principal moments of inertia in cm(-1) A = 0.015307 B = 0.012165 C = 0.008636 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1828.735059 B = 2301.073611 C = 3241.603826 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.138 4.138 2 C -0.077 4.077 3 C -0.114 4.114 4 C -0.100 4.100 5 C -0.219 4.219 6 C -0.087 4.087 7 C -0.193 4.193 8 C 0.018 3.982 9 H 0.099 0.901 10 Cl -0.129 7.129 11 C 0.351 3.649 12 C -0.198 4.198 13 O -0.430 6.430 14 C 0.154 3.846 15 C -0.462 4.462 16 H 0.094 0.906 17 C 0.097 3.903 18 N -0.801 5.801 19 Si 0.872 3.128 20 H -0.269 1.269 21 H -0.282 1.282 22 H -0.260 1.260 23 H 0.037 0.963 24 H 0.036 0.964 25 H 0.059 0.941 26 H 0.035 0.965 27 H 0.096 0.904 28 H 0.091 0.909 29 H 0.093 0.907 30 H 0.093 0.907 31 H 0.093 0.907 32 H 0.079 0.921 33 H 0.086 0.914 34 H 0.274 0.726 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.833 6.515 -1.980 7.051 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.195 4.195 2 C -0.114 4.114 3 C -0.115 4.115 4 C -0.119 4.119 5 C -0.238 4.238 6 C -0.105 4.105 7 C -0.195 4.195 8 C -0.027 4.027 9 H 0.117 0.883 10 Cl -0.101 7.101 11 C 0.224 3.776 12 C -0.255 4.255 13 O -0.301 6.301 14 C 0.151 3.849 15 C -0.492 4.492 16 H 0.112 0.888 17 C -0.117 4.117 18 N -0.429 5.429 19 Si 0.697 3.303 20 H -0.195 1.195 21 H -0.208 1.208 22 H -0.184 1.184 23 H 0.056 0.944 24 H 0.055 0.945 25 H 0.078 0.922 26 H 0.054 0.946 27 H 0.114 0.886 28 H 0.109 0.891 29 H 0.111 0.889 30 H 0.111 0.889 31 H 0.111 0.889 32 H 0.098 0.902 33 H 0.105 0.895 34 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges -1.937 5.918 -1.383 6.379 hybrid contribution -0.030 -0.551 0.376 0.667 sum -1.966 5.368 -1.007 5.804 Atomic orbital electron populations 1.21658 0.97090 0.99500 1.01248 1.20504 0.93984 0.94576 1.02356 1.20026 1.03078 0.96167 0.92268 1.20647 0.99813 0.94807 0.96587 1.20369 1.11390 0.95895 0.96160 1.20362 1.00130 0.97648 0.92400 1.19357 1.11676 0.98366 0.90094 1.22823 0.94888 0.93983 0.90959 0.88260 1.98716 1.85320 1.70089 1.56009 1.24638 0.87835 0.85907 0.79185 1.22255 1.02665 0.96758 1.03848 1.90397 1.58009 1.54912 1.26757 1.17212 0.85809 0.88945 0.92931 1.19390 1.23875 1.03245 1.02715 0.88848 1.25292 0.93375 0.97029 0.95975 1.69873 1.14652 1.19130 1.39223 0.86850 0.80240 0.80784 0.82379 1.19452 1.20778 1.18377 0.94369 0.94492 0.92157 0.94604 0.88567 0.89119 0.88904 0.88915 0.88859 0.90227 0.89498 0.91548 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.71 9.89 37.15 0.37 -2.35 16 2 C -0.08 -1.70 5.44 -27.88 -0.15 -1.85 16 3 C -0.11 -2.68 4.90 -103.91 -0.51 -3.19 16 4 C -0.10 -2.15 9.66 -39.67 -0.38 -2.54 16 5 C -0.22 -4.40 10.05 -39.29 -0.39 -4.80 16 6 C -0.09 -1.72 9.65 -39.66 -0.38 -2.10 16 7 C -0.19 -4.22 4.91 -103.92 -0.51 -4.73 16 8 C 0.02 0.36 3.10 -29.03 -0.09 0.27 16 9 H 0.10 1.60 7.99 -51.93 -0.41 1.19 16 10 Cl -0.13 -2.88 24.30 -51.86 -1.26 -4.14 16 11 C 0.35 6.46 6.24 -29.03 -0.18 6.28 16 12 C -0.20 -2.59 10.26 36.01 0.37 -2.22 16 13 O -0.43 -9.42 15.03 6.01 0.09 -9.33 16 14 C 0.15 3.75 5.00 -106.83 -0.53 3.21 16 15 C -0.46 -11.65 4.67 -37.74 -0.18 -11.83 16 16 H 0.09 2.50 5.67 -52.49 -0.30 2.21 16 17 C 0.10 2.42 3.06 -17.34 -0.05 2.37 16 18 N -0.80 -20.53 11.74 55.55 0.65 -19.87 16 19 Si 0.87 19.79 29.60 -169.99 -5.03 14.76 16 20 H -0.27 -5.94 7.11 56.52 0.40 -5.54 16 21 H -0.28 -6.35 7.11 56.52 0.40 -5.95 16 22 H -0.26 -6.07 7.11 56.52 0.40 -5.67 16 23 H 0.04 0.69 8.14 -51.93 -0.42 0.27 16 24 H 0.04 0.65 8.14 -51.93 -0.42 0.23 16 25 H 0.06 1.26 8.01 -51.93 -0.42 0.85 16 26 H 0.04 0.74 8.05 -51.93 -0.42 0.32 16 27 H 0.10 2.32 4.15 -51.93 -0.22 2.10 16 28 H 0.09 1.77 8.06 -52.48 -0.42 1.34 16 29 H 0.09 1.62 8.06 -52.48 -0.42 1.20 16 30 H 0.09 1.52 8.02 -52.49 -0.42 1.10 16 31 H 0.09 1.17 8.14 -51.93 -0.42 0.74 16 32 H 0.08 0.99 8.12 -51.93 -0.42 0.56 16 33 H 0.09 0.88 8.14 -51.93 -0.42 0.46 16 34 H 0.27 6.63 8.30 -40.82 -0.34 6.29 16 LS Contribution 295.82 15.07 4.46 4.46 Total: -1.00 -27.90 295.82 -8.00 -35.90 By element: Atomic # 1 Polarization: 5.98 SS G_CDS: -4.28 Total: 1.70 kcal Atomic # 6 Polarization: -20.85 SS G_CDS: -2.63 Total: -23.48 kcal Atomic # 7 Polarization: -20.53 SS G_CDS: 0.65 Total: -19.87 kcal Atomic # 8 Polarization: -9.42 SS G_CDS: 0.09 Total: -9.33 kcal Atomic # 14 Polarization: 19.79 SS G_CDS: -5.03 Total: 14.76 kcal Atomic # 17 Polarization: -2.88 SS G_CDS: -1.26 Total: -4.14 kcal Total LS contribution 4.46 Total: 4.46 kcal Total: -27.90 -8.00 -35.90 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000396053648.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 6.606 kcal (2) G-P(sol) polarization free energy of solvation -27.904 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -21.298 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.997 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.902 kcal (6) G-S(sol) free energy of system = (1) + (5) -29.295 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.48 seconds