Wall clock time and date at job start Mon Mar 30 2020 07:15:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 C 1.50701 * 109.47585 * 2 1 4 4 C 1.37634 * 120.12416 * 265.00270 * 3 2 1 5 5 C 1.38625 * 120.24968 * 179.97438 * 4 3 2 6 6 C 1.38661 * 120.49484 * 0.02562 * 5 4 3 7 7 C 1.37594 * 120.24902 * 0.02562 * 6 5 4 8 8 C 1.50705 * 120.12679 * 179.97438 * 7 6 5 9 9 H 1.08993 * 109.47311 * 213.67596 * 8 7 6 10 10 Cl 1.80305 * 109.46882 * 333.67433 * 8 7 6 11 11 C 1.50697 * 109.47085 * 93.67144 * 8 7 6 12 12 C 1.50700 * 120.00280 * 275.17893 * 11 8 7 13 13 O 1.20762 * 119.99842 * 95.17814 * 11 8 7 14 14 C 1.40692 * 120.12971 * 84.72382 * 3 2 1 15 15 C 1.41400 * 120.24304 * 359.97438 * 14 3 2 16 16 H 1.08001 * 120.00064 * 235.66582 * 15 14 3 17 17 C 1.39941 * 119.99603 * 55.67147 * 15 14 3 18 18 N 1.30821 * 120.00324 * 17.32348 * 17 15 14 19 19 Si 1.86810 * 119.99944 * 197.32359 * 17 15 14 20 20 H 1.48494 * 109.46926 * 59.99512 * 19 17 15 21 21 H 1.48493 * 109.47200 * 179.97438 * 19 17 15 22 22 H 1.48503 * 109.46707 * 299.99820 * 19 17 15 23 23 H 1.09001 * 109.47437 * 180.02562 * 1 2 3 24 24 H 1.09000 * 109.47319 * 300.00582 * 1 2 3 25 25 H 1.09003 * 109.47047 * 59.99508 * 1 2 3 26 26 H 1.08998 * 109.47103 * 239.99919 * 2 1 3 27 27 H 1.09001 * 109.47048 * 119.99536 * 2 1 3 28 28 H 1.08001 * 119.88022 * 359.97438 * 4 3 2 29 29 H 1.07989 * 119.75044 * 180.02562 * 5 4 3 30 30 H 1.08002 * 119.86889 * 180.02562 * 6 5 4 31 31 H 1.09001 * 109.47227 * 90.00148 * 12 11 8 32 32 H 1.09001 * 109.47263 * 210.00200 * 12 11 8 33 33 H 1.08998 * 109.46897 * 329.99741 * 12 11 8 34 34 H 0.97000 * 120.00438 * 174.96625 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0324 1.4208 0.0000 4 6 2.3605 2.0374 -1.1859 5 6 2.8224 3.3445 -1.1890 6 6 2.9599 4.0450 -0.0003 7 6 2.6388 3.4480 1.1971 8 6 2.7899 4.2118 2.4875 9 1 3.0811 3.5264 3.2834 10 17 4.0579 5.4785 2.2913 11 6 1.4784 4.8644 2.8414 12 6 1.1210 6.2051 2.2534 13 8 0.7139 4.3130 3.5962 14 6 2.1624 2.1239 1.2117 15 6 1.8222 1.5027 2.4356 16 1 1.0978 1.9625 3.0915 17 6 2.4245 0.2923 2.7969 18 7 3.5225 -0.0956 2.2008 19 14 1.6605 -0.7695 4.1305 20 1 0.2859 -1.1593 3.7260 21 1 2.4839 -1.9900 4.3239 22 1 1.6039 -0.0034 5.4014 23 1 -0.3634 -1.0276 0.0005 24 1 -0.3634 0.5139 0.8899 25 1 -0.3633 0.5139 -0.8900 26 1 1.8933 -0.5138 -0.8900 27 1 1.8933 -0.5138 0.8900 28 1 2.2577 1.5011 -2.1177 29 1 3.0771 3.8206 -2.1242 30 1 3.3203 5.0630 -0.0145 31 1 0.5864 6.0593 1.3148 32 1 0.4866 6.7508 2.9519 33 1 2.0315 6.7750 2.0682 34 1 3.9799 -0.8968 2.5004 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000396053651.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:15:30 Heat of formation + Delta-G solvation = -40.185043 kcal Electronic energy + Delta-G solvation = -18498.768016 eV Core-core repulsion = 15614.790669 eV Total energy + Delta-G solvation = -2883.977347 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 266.081 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -39.21693 -37.96045 -35.57315 -33.95148 -32.81310 -31.15857 -29.84955 -28.56349 -26.53164 -25.03307 -22.67796 -20.80344 -19.77142 -18.63136 -17.23908 -15.64229 -15.39595 -15.16820 -14.98919 -14.34203 -14.23529 -13.63755 -12.85678 -12.82722 -12.57664 -12.22234 -12.13495 -11.87011 -11.73090 -11.46231 -11.28618 -11.16869 -10.93177 -10.74667 -10.56255 -10.34968 -10.09765 -10.00423 -9.70079 -9.44202 -9.12430 -8.68508 -7.48815 -7.10305 -6.66084 -4.47877 2.05841 2.65194 2.74025 2.88408 3.12261 3.14547 3.17877 4.02806 4.43859 4.64502 5.19380 5.40997 5.53484 5.72484 5.77445 5.95690 5.97455 6.10610 6.15754 6.26896 6.36508 6.44473 6.50699 6.67561 6.84410 6.97519 7.09465 7.21575 7.29417 7.56594 7.62910 7.70181 7.85520 8.04131 8.06994 8.49162 8.77296 8.91424 10.33063 Molecular weight = 266.08amu Principal moments of inertia in cm(-1) A = 0.016850 B = 0.009415 C = 0.007608 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1661.337366 B = 2973.143021 C = 3679.349719 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.138 4.138 2 C -0.075 4.075 3 C -0.110 4.110 4 C -0.102 4.102 5 C -0.208 4.208 6 C -0.086 4.086 7 C -0.183 4.183 8 C 0.033 3.967 9 H 0.133 0.867 10 Cl -0.186 7.186 11 C 0.366 3.634 12 C -0.207 4.207 13 O -0.441 6.441 14 C 0.155 3.845 15 C -0.505 4.505 16 H 0.090 0.910 17 C 0.091 3.909 18 N -0.811 5.811 19 Si 0.890 3.110 20 H -0.263 1.263 21 H -0.280 1.280 22 H -0.266 1.266 23 H 0.037 0.963 24 H 0.060 0.940 25 H 0.038 0.962 26 H 0.037 0.963 27 H 0.095 0.905 28 H 0.093 0.907 29 H 0.095 0.905 30 H 0.104 0.896 31 H 0.095 0.905 32 H 0.081 0.919 33 H 0.091 0.909 34 H 0.279 0.721 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.684 5.523 -1.757 6.035 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.196 4.196 2 C -0.112 4.112 3 C -0.111 4.111 4 C -0.120 4.120 5 C -0.227 4.227 6 C -0.104 4.104 7 C -0.185 4.185 8 C -0.011 4.011 9 H 0.150 0.850 10 Cl -0.160 7.160 11 C 0.240 3.760 12 C -0.264 4.264 13 O -0.313 6.313 14 C 0.153 3.847 15 C -0.537 4.537 16 H 0.108 0.892 17 C -0.123 4.123 18 N -0.439 5.439 19 Si 0.714 3.286 20 H -0.188 1.188 21 H -0.206 1.206 22 H -0.190 1.190 23 H 0.056 0.944 24 H 0.079 0.921 25 H 0.057 0.943 26 H 0.056 0.944 27 H 0.114 0.886 28 H 0.111 0.889 29 H 0.114 0.886 30 H 0.122 0.878 31 H 0.114 0.886 32 H 0.100 0.900 33 H 0.110 0.890 34 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges -1.860 5.107 -1.394 5.611 hybrid contribution 0.020 -0.489 0.418 0.643 sum -1.840 4.618 -0.976 5.066 Atomic orbital electron populations 1.21666 0.96968 0.99597 1.01333 1.20465 0.94053 0.94383 1.02344 1.20038 1.02704 0.96171 0.92156 1.20713 0.99745 0.94862 0.96682 1.20505 1.10039 0.95753 0.96432 1.20616 0.99160 0.98482 0.92140 1.19456 1.11165 0.97496 0.90368 1.23448 0.86500 0.89511 1.01644 0.84958 1.98653 1.59289 1.59744 1.98316 1.24588 0.86883 0.87024 0.77489 1.22322 1.04288 0.96571 1.03263 1.90410 1.49572 1.62826 1.28532 1.17162 0.86203 0.88437 0.92944 1.19327 1.24846 1.05037 1.04451 0.89210 1.25515 0.94071 0.96297 0.96466 1.69775 1.13209 1.23090 1.37806 0.86653 0.80483 0.79533 0.81883 1.18770 1.20553 1.19046 0.94389 0.92124 0.94290 0.94434 0.88649 0.88851 0.88631 0.87766 0.88638 0.90050 0.89043 0.91044 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.69 9.89 37.15 0.37 -2.32 16 2 C -0.08 -1.64 5.44 -27.88 -0.15 -1.79 16 3 C -0.11 -2.55 4.90 -103.92 -0.51 -3.06 16 4 C -0.10 -2.17 9.66 -39.66 -0.38 -2.56 16 5 C -0.21 -4.22 10.05 -39.28 -0.39 -4.62 16 6 C -0.09 -1.75 9.14 -39.66 -0.36 -2.11 16 7 C -0.18 -4.05 5.05 -103.91 -0.52 -4.57 16 8 C 0.03 0.65 2.91 -29.03 -0.08 0.57 16 9 H 0.13 2.91 7.27 -51.93 -0.38 2.53 16 10 Cl -0.19 -3.19 24.88 -51.86 -1.29 -4.48 16 11 C 0.37 6.84 6.37 -29.04 -0.18 6.66 16 12 C -0.21 -2.96 10.11 36.01 0.36 -2.60 16 13 O -0.44 -9.52 16.66 6.00 0.10 -9.42 16 14 C 0.15 3.76 5.07 -106.82 -0.54 3.22 16 15 C -0.51 -12.64 6.80 -37.74 -0.26 -12.90 16 16 H 0.09 2.33 6.69 -52.49 -0.35 1.98 16 17 C 0.09 2.21 3.47 -17.34 -0.06 2.15 16 18 N -0.81 -20.43 11.73 55.55 0.65 -19.78 16 19 Si 0.89 19.01 29.60 -169.99 -5.03 13.97 16 20 H -0.26 -5.58 7.11 56.52 0.40 -5.18 16 21 H -0.28 -5.85 7.11 56.52 0.40 -5.45 16 22 H -0.27 -5.74 7.11 56.52 0.40 -5.34 16 23 H 0.04 0.65 8.14 -51.93 -0.42 0.23 16 24 H 0.06 1.26 7.94 -51.93 -0.41 0.85 16 25 H 0.04 0.70 8.14 -51.93 -0.42 0.27 16 26 H 0.04 0.76 8.05 -51.93 -0.42 0.35 16 27 H 0.10 2.26 4.28 -51.93 -0.22 2.04 16 28 H 0.09 1.79 8.06 -52.49 -0.42 1.37 16 29 H 0.10 1.68 8.06 -52.49 -0.42 1.26 16 30 H 0.10 1.90 6.67 -52.49 -0.35 1.55 16 31 H 0.10 1.30 8.14 -51.93 -0.42 0.88 16 32 H 0.08 1.02 8.14 -51.93 -0.42 0.60 16 33 H 0.09 1.19 6.31 -51.93 -0.33 0.86 16 34 H 0.28 6.58 8.30 -40.82 -0.34 6.24 16 LS Contribution 297.25 15.07 4.48 4.48 Total: -1.00 -26.17 297.25 -7.94 -34.11 By element: Atomic # 1 Polarization: 9.16 SS G_CDS: -4.13 Total: 5.03 kcal Atomic # 6 Polarization: -21.20 SS G_CDS: -2.72 Total: -23.92 kcal Atomic # 7 Polarization: -20.43 SS G_CDS: 0.65 Total: -19.78 kcal Atomic # 8 Polarization: -9.52 SS G_CDS: 0.10 Total: -9.42 kcal Atomic # 14 Polarization: 19.01 SS G_CDS: -5.03 Total: 13.97 kcal Atomic # 17 Polarization: -3.19 SS G_CDS: -1.29 Total: -4.48 kcal Total LS contribution 4.48 Total: 4.48 kcal Total: -26.17 -7.94 -34.11 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000396053651.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -6.073 kcal (2) G-P(sol) polarization free energy of solvation -26.170 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -32.242 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.943 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.112 kcal (6) G-S(sol) free energy of system = (1) + (5) -40.185 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds