Wall clock time and date at job start Mon Mar 30 2020 07:14:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52992 * 1 3 3 C 1.50705 * 109.46975 * 2 1 4 4 C 1.38653 * 119.87537 * 264.97698 * 3 2 1 5 5 C 1.38613 * 120.50469 * 180.02562 * 4 3 2 6 6 C 1.37643 * 120.24514 * 359.73534 * 5 4 3 7 7 C 1.40697 * 119.74373 * 0.52287 * 6 5 4 8 8 C 1.41391 * 120.24218 * 179.76443 * 7 6 5 9 9 H 1.08003 * 120.00051 * 149.80220 * 8 7 6 10 10 C 1.39944 * 120.00137 * 329.52471 * 8 7 6 11 11 N 1.30826 * 120.00325 * 162.13566 * 10 8 7 12 12 Si 1.86800 * 119.99824 * 342.13220 * 10 8 7 13 13 H 1.48498 * 109.47162 * 95.36181 * 12 10 8 14 14 H 1.48499 * 109.47100 * 215.36156 * 12 10 8 15 15 H 1.48498 * 109.47221 * 335.35870 * 12 10 8 16 16 C 1.37596 * 119.87690 * 85.00355 * 3 2 1 17 17 C 1.50701 * 120.12611 * 359.97438 * 16 3 2 18 18 C 1.50705 * 109.46762 * 269.97784 * 17 16 3 19 19 O 1.20749 * 120.00559 * 0.02562 * 18 17 16 20 20 C 1.50698 * 119.99665 * 179.97438 * 18 17 16 21 21 Cl 1.80296 * 109.47310 * 180.02562 * 20 18 17 22 22 H 1.09003 * 109.47223 * 300.00033 * 1 2 3 23 23 H 1.09003 * 109.47289 * 60.00086 * 1 2 3 24 24 H 1.09002 * 109.47338 * 180.02562 * 1 2 3 25 25 H 1.08994 * 109.47371 * 240.00100 * 2 1 3 26 26 H 1.08998 * 109.47718 * 119.99775 * 2 1 3 27 27 H 1.08005 * 119.74810 * 359.97438 * 4 3 2 28 28 H 1.08005 * 119.87663 * 180.02562 * 5 4 3 29 29 H 1.07994 * 120.12603 * 180.25486 * 6 5 4 30 30 H 0.96996 * 120.00154 * 179.97438 * 11 10 8 31 31 H 1.08997 * 109.47020 * 29.98292 * 17 16 3 32 32 H 1.08999 * 109.46738 * 149.98243 * 17 16 3 33 33 H 1.09006 * 109.47641 * 300.00777 * 20 18 17 34 34 H 1.09005 * 109.47433 * 60.00213 * 20 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0322 1.4209 0.0000 4 6 2.3617 2.0369 -1.1977 5 6 2.8254 3.3431 -1.2128 6 6 2.9587 4.0452 -0.0364 7 6 2.6326 3.4283 1.1854 8 6 2.7702 4.1380 2.4005 9 1 2.1175 3.9168 3.2320 10 6 3.7560 5.1232 2.5277 11 7 3.6750 6.0098 3.4863 12 14 5.1877 5.1720 1.3288 13 1 4.8846 6.1292 0.2346 14 1 6.4155 5.6076 2.0415 15 1 5.4012 3.8182 0.7572 16 6 2.1627 2.1017 1.1886 17 6 1.8039 1.4295 2.4887 18 6 0.3501 1.6782 2.7982 19 8 -0.3250 2.3332 2.0411 20 6 -0.2614 1.1084 4.0522 21 17 -2.0007 1.5754 4.1385 22 1 -0.3634 0.5138 0.8900 23 1 -0.3634 0.5138 -0.8900 24 1 -0.3634 -1.0277 0.0005 25 1 1.8933 -0.5138 -0.8899 26 1 1.8934 -0.5138 0.8899 27 1 2.2570 1.4947 -2.1258 28 1 3.0787 3.8133 -2.1516 29 1 3.3163 5.0641 -0.0508 30 1 4.3585 6.6924 3.5746 31 1 1.9791 0.3570 2.4036 32 1 2.4207 1.8359 3.2902 33 1 -0.1777 0.0216 4.0360 34 1 0.2640 1.5002 4.9232 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000396057518.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:14:35 Heat of formation + Delta-G solvation = -42.135732 kcal Electronic energy + Delta-G solvation = -18296.447042 eV Core-core repulsion = 15412.385106 eV Total energy + Delta-G solvation = -2884.061936 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 266.081 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -39.46012 -37.75061 -35.71700 -34.25558 -32.97309 -31.84216 -29.83847 -28.93573 -26.50486 -24.78625 -23.13717 -20.46483 -20.23211 -18.83792 -17.04903 -15.84728 -15.74618 -15.62876 -14.89943 -14.51457 -14.14608 -13.79183 -13.24345 -12.97401 -12.74985 -12.66296 -12.54321 -12.08245 -11.76375 -11.63700 -11.29815 -11.19666 -10.83476 -10.67742 -10.56317 -10.34934 -10.28246 -10.07666 -9.69587 -9.56005 -9.16292 -9.11031 -7.52873 -7.46162 -6.95766 -4.51114 2.23194 2.44385 2.58374 2.66066 3.11217 3.19865 3.30842 3.97153 4.27623 4.50258 5.06056 5.22133 5.33096 5.43298 5.50672 5.67575 5.81908 5.91018 6.04022 6.13823 6.19028 6.26217 6.27984 6.37172 6.57829 6.69509 6.72091 6.96098 7.20073 7.43884 7.66971 7.73437 7.88101 8.00630 8.10552 8.32575 8.64719 8.79886 10.06245 Molecular weight = 266.08amu Principal moments of inertia in cm(-1) A = 0.017496 B = 0.008220 C = 0.006054 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1599.970980 B = 3405.533162 C = 4623.826601 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.083 4.083 3 C -0.036 4.036 4 C -0.236 4.236 5 C -0.077 4.077 6 C -0.235 4.235 7 C 0.108 3.892 8 C -0.448 4.448 9 H 0.088 0.912 10 C 0.086 3.914 11 N -0.809 5.809 12 Si 0.909 3.091 13 H -0.271 1.271 14 H -0.292 1.292 15 H -0.244 1.244 16 C -0.169 4.169 17 C -0.104 4.104 18 C 0.342 3.658 19 O -0.408 6.408 20 C -0.092 4.092 21 Cl -0.162 7.162 22 H 0.061 0.939 23 H 0.053 0.947 24 H 0.044 0.956 25 H 0.058 0.942 26 H 0.062 0.938 27 H 0.092 0.908 28 H 0.092 0.908 29 H 0.099 0.901 30 H 0.284 0.716 31 H 0.089 0.911 32 H 0.108 0.892 33 H 0.118 0.882 34 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.102 -10.121 0.401 10.345 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.120 4.120 3 C -0.036 4.036 4 C -0.255 4.255 5 C -0.096 4.096 6 C -0.254 4.254 7 C 0.105 3.895 8 C -0.477 4.477 9 H 0.106 0.894 10 C -0.133 4.133 11 N -0.433 5.433 12 Si 0.736 3.264 13 H -0.198 1.198 14 H -0.219 1.219 15 H -0.167 1.167 16 C -0.170 4.170 17 C -0.141 4.141 18 C 0.213 3.787 19 O -0.277 6.277 20 C -0.155 4.155 21 Cl -0.135 7.135 22 H 0.080 0.920 23 H 0.072 0.928 24 H 0.063 0.937 25 H 0.077 0.923 26 H 0.081 0.919 27 H 0.110 0.890 28 H 0.110 0.890 29 H 0.117 0.883 30 H 0.095 0.905 31 H 0.107 0.893 32 H 0.126 0.874 33 H 0.136 0.864 34 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges -2.547 -9.504 0.187 9.841 hybrid contribution 0.635 0.301 -0.317 0.771 sum -1.912 -9.203 -0.130 9.401 Atomic orbital electron populations 1.21823 0.95441 1.00181 1.03133 1.20520 0.95676 0.94597 1.01204 1.19186 0.97101 0.94140 0.93134 1.20212 1.13177 0.96315 0.95776 1.20593 0.98072 0.94406 0.96510 1.20994 1.12352 0.99262 0.92836 1.17482 0.89096 0.90186 0.92692 1.19376 1.15168 1.14234 0.98872 0.89403 1.26136 0.99476 0.92399 0.95312 1.69700 1.32735 1.10860 1.29974 0.86340 0.79136 0.81154 0.79763 1.19766 1.21948 1.16712 1.18919 1.12212 0.94428 0.91483 1.20743 0.92991 1.01018 0.99314 1.24733 0.91307 0.77934 0.84733 1.90448 1.62891 1.27967 1.46419 1.25100 0.83627 1.04053 1.02745 1.98720 1.21820 1.94124 1.98870 0.92011 0.92797 0.93731 0.92289 0.91948 0.89004 0.88983 0.88340 0.90517 0.89347 0.87442 0.86418 0.86012 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.32 9.89 37.15 0.37 -1.95 16 2 C -0.08 -1.33 5.55 -27.88 -0.15 -1.49 16 3 C -0.04 -0.72 5.13 -104.70 -0.54 -1.26 16 4 C -0.24 -4.93 9.68 -39.29 -0.38 -5.31 16 5 C -0.08 -1.71 10.02 -39.66 -0.40 -2.11 16 6 C -0.24 -5.74 7.17 -38.87 -0.28 -6.02 16 7 C 0.11 2.68 5.09 -106.83 -0.54 2.14 16 8 C -0.45 -11.64 8.54 -37.74 -0.32 -11.96 16 9 H 0.09 2.36 7.19 -52.48 -0.38 1.98 16 10 C 0.09 2.20 5.41 -17.34 -0.09 2.10 16 11 N -0.81 -21.19 13.93 55.55 0.77 -20.42 16 12 Si 0.91 20.57 24.53 -169.99 -4.17 16.40 16 13 H -0.27 -6.08 6.72 56.52 0.38 -5.70 16 14 H -0.29 -6.35 7.11 56.52 0.40 -5.95 16 15 H -0.24 -5.62 6.86 56.52 0.39 -5.23 16 16 C -0.17 -3.67 4.43 -103.91 -0.46 -4.13 16 17 C -0.10 -1.81 4.75 -29.03 -0.14 -1.94 16 18 C 0.34 5.89 5.66 -29.03 -0.16 5.72 16 19 O -0.41 -8.70 14.18 6.01 0.09 -8.62 16 20 C -0.09 -1.18 7.07 36.00 0.25 -0.92 16 21 Cl -0.16 -2.43 28.37 -51.86 -1.47 -3.90 16 22 H 0.06 1.04 4.59 -51.93 -0.24 0.81 16 23 H 0.05 0.88 8.14 -51.93 -0.42 0.46 16 24 H 0.04 0.57 8.14 -51.93 -0.42 0.15 16 25 H 0.06 0.87 8.05 -51.93 -0.42 0.45 16 26 H 0.06 0.89 6.15 -51.93 -0.32 0.57 16 27 H 0.09 1.71 8.06 -52.48 -0.42 1.28 16 28 H 0.09 1.79 8.06 -52.48 -0.42 1.36 16 29 H 0.10 2.41 4.79 -52.49 -0.25 2.16 16 30 H 0.28 6.79 8.30 -40.82 -0.34 6.45 16 31 H 0.09 1.24 6.01 -51.93 -0.31 0.93 16 32 H 0.11 1.89 6.86 -51.93 -0.36 1.53 16 33 H 0.12 1.09 8.14 -51.93 -0.42 0.67 16 34 H 0.12 1.34 8.14 -51.93 -0.42 0.92 16 LS Contribution 290.71 15.07 4.38 4.38 Total: -1.00 -29.22 290.71 -7.23 -36.44 By element: Atomic # 1 Polarization: 6.83 SS G_CDS: -3.98 Total: 2.85 kcal Atomic # 6 Polarization: -24.28 SS G_CDS: -2.85 Total: -27.13 kcal Atomic # 7 Polarization: -21.19 SS G_CDS: 0.77 Total: -20.42 kcal Atomic # 8 Polarization: -8.70 SS G_CDS: 0.09 Total: -8.62 kcal Atomic # 14 Polarization: 20.57 SS G_CDS: -4.17 Total: 16.40 kcal Atomic # 17 Polarization: -2.43 SS G_CDS: -1.47 Total: -3.90 kcal Total LS contribution 4.38 Total: 4.38 kcal Total: -29.22 -7.23 -36.44 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000396057518.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -5.691 kcal (2) G-P(sol) polarization free energy of solvation -29.216 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -34.907 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.228 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.444 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.136 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds