Wall clock time and date at job start Mon Mar 30 2020 07:15:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.50703 * 109.46729 * 2 1 4 4 C 1.37553 * 120.06781 * 264.97470 * 3 2 1 5 5 C 1.38669 * 121.22588 * 180.02562 * 4 3 2 6 6 C 1.38065 * 121.30926 * 359.78851 * 5 4 3 7 7 C 1.39646 * 120.01456 * 0.47249 * 6 5 4 8 8 C 1.46605 * 120.58735 * 179.78909 * 7 6 5 9 9 O 1.21342 * 120.00520 * 173.19683 * 8 7 6 10 10 C 1.50703 * 119.99877 * 353.20181 * 8 7 6 11 11 C 1.53005 * 109.47167 * 185.01883 * 10 8 7 12 12 Cl 1.80299 * 109.46930 * 175.27774 * 11 10 8 13 13 C 1.40781 * 120.07061 * 85.00257 * 3 2 1 14 14 C 1.40737 * 120.62289 * 359.95424 * 13 3 2 15 15 H 1.07999 * 119.99297 * 304.98525 * 14 13 3 16 16 C 1.40388 * 120.00337 * 124.98030 * 14 13 3 17 17 N 1.30568 * 120.00041 * 173.04911 * 16 14 13 18 18 Si 1.86801 * 120.00017 * 353.04879 * 16 14 13 19 19 H 1.48494 * 109.46970 * 95.69991 * 18 16 14 20 20 H 1.48494 * 109.46955 * 215.70251 * 18 16 14 21 21 H 1.48502 * 109.47115 * 335.70275 * 18 16 14 22 22 H 1.09002 * 109.47069 * 180.02562 * 1 2 3 23 23 H 1.09001 * 109.47246 * 299.99655 * 1 2 3 24 24 H 1.08998 * 109.47440 * 60.00201 * 1 2 3 25 25 H 1.09001 * 109.47246 * 240.00345 * 2 1 3 26 26 H 1.08998 * 109.47440 * 119.99798 * 2 1 3 27 27 H 1.08000 * 119.38764 * 0.02719 * 4 3 2 28 28 H 1.08000 * 119.34610 * 180.02562 * 5 4 3 29 29 H 1.07996 * 119.99293 * 180.26132 * 6 5 4 30 30 H 1.09002 * 109.47062 * 65.02709 * 10 8 7 31 31 H 1.08997 * 109.47058 * 305.02433 * 10 8 7 32 32 H 1.08998 * 109.47810 * 295.28424 * 11 10 8 33 33 H 1.09004 * 109.46873 * 55.28032 * 11 10 8 34 34 H 0.96992 * 119.99728 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0322 1.4209 0.0000 4 6 2.3602 2.0359 -1.1858 5 6 2.8251 3.3420 -1.2137 6 6 2.9723 4.0761 -0.0537 7 6 2.6602 3.5022 1.1805 8 6 2.8162 4.2686 2.4205 9 8 2.4271 3.8062 3.4727 10 6 3.4597 5.6309 2.3883 11 6 3.6129 6.1566 3.8170 12 17 4.5067 7.7221 3.7888 13 6 2.1673 2.1213 1.2137 14 6 1.8360 1.5078 2.4362 15 1 0.8548 1.0788 2.5766 16 6 2.7809 1.4532 3.4731 17 7 2.4334 1.0078 4.6502 18 14 4.5353 2.0178 3.1686 19 1 4.6839 3.4292 3.6055 20 1 5.4719 1.1601 3.9381 21 1 4.8447 1.9130 1.7199 22 1 -0.3633 -1.0277 0.0005 23 1 -0.3634 0.5138 0.8900 24 1 -0.3634 0.5138 -0.8900 25 1 1.8934 -0.5138 -0.8900 26 1 1.8934 -0.5138 0.8900 27 1 2.2537 1.4914 -2.1124 28 1 3.0733 3.7954 -2.1620 29 1 3.3322 5.0933 -0.1005 30 1 2.8340 6.3149 1.8148 31 1 4.4416 5.5580 1.9207 32 1 2.6268 6.3090 4.2559 33 1 4.1677 5.4320 4.4132 34 1 3.0862 0.9705 5.3666 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000396059104.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:15:59 Heat of formation + Delta-G solvation = -32.993508 kcal Electronic energy + Delta-G solvation = -18345.474745 eV Core-core repulsion = 15461.809246 eV Total energy + Delta-G solvation = -2883.665499 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 266.081 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -39.14468 -37.27452 -35.84293 -33.73777 -32.98875 -31.86757 -30.35254 -28.78955 -25.80866 -24.07234 -22.88042 -21.54291 -20.00218 -18.29537 -17.49302 -15.97180 -15.68483 -15.06092 -14.87471 -14.14017 -13.90417 -13.49969 -13.26917 -12.92908 -12.88578 -12.56745 -12.36137 -12.10158 -11.73014 -11.57026 -11.48080 -11.04829 -10.71035 -10.48626 -10.44646 -10.33280 -10.19699 -10.11414 -9.98433 -9.57010 -9.32785 -8.30521 -7.75601 -7.39010 -6.78187 -4.47372 1.73861 2.39426 2.54623 3.05426 3.15585 3.23848 3.53972 4.03360 4.60702 4.83770 5.06941 5.10338 5.19181 5.62164 5.71933 5.74598 5.91791 5.94754 6.03550 6.08975 6.13951 6.20412 6.42168 6.51221 6.58736 6.72387 6.86599 6.95171 7.14010 7.28016 7.40656 7.53311 7.78713 7.96496 8.31363 8.56915 8.63760 8.82853 10.18726 Molecular weight = 266.08amu Principal moments of inertia in cm(-1) A = 0.020747 B = 0.007760 C = 0.006341 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1349.256982 B = 3607.320528 C = 4414.317391 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.140 4.140 2 C -0.063 4.063 3 C -0.161 4.161 4 C -0.069 4.069 5 C -0.239 4.239 6 C -0.044 4.044 7 C -0.282 4.282 8 C 0.379 3.621 9 O -0.436 6.436 10 C -0.175 4.175 11 C -0.014 4.014 12 Cl -0.203 7.203 13 C 0.134 3.866 14 C -0.437 4.437 15 H 0.097 0.903 16 C 0.125 3.875 17 N -0.795 5.795 18 Si 0.895 3.105 19 H -0.265 1.265 20 H -0.291 1.291 21 H -0.248 1.248 22 H 0.042 0.958 23 H 0.059 0.941 24 H 0.043 0.957 25 H 0.047 0.953 26 H 0.074 0.926 27 H 0.096 0.904 28 H 0.097 0.903 29 H 0.101 0.899 30 H 0.099 0.901 31 H 0.096 0.904 32 H 0.099 0.901 33 H 0.098 0.902 34 H 0.283 0.717 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.338 4.814 -4.916 7.267 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.198 4.198 2 C -0.101 4.101 3 C -0.162 4.162 4 C -0.087 4.087 5 C -0.258 4.258 6 C -0.062 4.062 7 C -0.285 4.285 8 C 0.260 3.740 9 O -0.313 6.313 10 C -0.213 4.213 11 C -0.076 4.076 12 Cl -0.177 7.177 13 C 0.130 3.870 14 C -0.464 4.464 15 H 0.115 0.885 16 C -0.096 4.096 17 N -0.420 5.420 18 Si 0.721 3.279 19 H -0.191 1.191 20 H -0.218 1.218 21 H -0.172 1.172 22 H 0.062 0.938 23 H 0.078 0.922 24 H 0.062 0.938 25 H 0.066 0.934 26 H 0.093 0.907 27 H 0.114 0.886 28 H 0.115 0.885 29 H 0.119 0.881 30 H 0.117 0.883 31 H 0.114 0.886 32 H 0.117 0.883 33 H 0.116 0.884 34 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges 2.206 4.605 -4.082 6.538 hybrid contribution 0.895 0.543 -0.163 1.059 sum 3.101 5.148 -4.245 7.358 Atomic orbital electron populations 1.21702 0.96336 1.00106 1.01632 1.20193 0.94994 0.93652 1.01233 1.20136 1.07267 0.95694 0.93112 1.20676 0.97227 0.94522 0.96287 1.20311 1.12603 0.96161 0.96690 1.20950 0.95541 0.97405 0.92334 1.21179 1.19404 0.95314 0.92576 1.21642 0.76958 0.86164 0.89273 1.90566 1.38932 1.69482 1.32370 1.22367 1.03705 0.98748 0.96526 1.24257 0.99381 0.84620 0.99381 1.98685 1.80083 1.39759 1.99199 1.18572 0.87087 0.88485 0.92892 1.19183 1.01292 1.31849 0.94077 0.88502 1.25877 1.00945 0.89710 0.93048 1.69468 1.36705 1.34035 1.01756 0.86738 0.81333 0.79303 0.80532 1.19071 1.21782 1.17164 0.93846 0.92196 0.93829 0.93403 0.90702 0.88583 0.88503 0.88083 0.88266 0.88568 0.88268 0.88364 0.90646 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.44 9.89 37.16 0.37 -2.07 16 2 C -0.06 -1.21 5.60 -27.88 -0.16 -1.36 16 3 C -0.16 -3.47 5.19 -103.91 -0.54 -4.00 16 4 C -0.07 -1.33 9.60 -39.67 -0.38 -1.71 16 5 C -0.24 -4.50 9.98 -39.49 -0.39 -4.89 16 6 C -0.04 -0.85 9.47 -39.12 -0.37 -1.22 16 7 C -0.28 -6.29 4.71 -102.60 -0.48 -6.77 16 8 C 0.38 8.09 4.27 -30.93 -0.13 7.96 16 9 O -0.44 -10.60 10.85 5.50 0.06 -10.54 16 10 C -0.18 -2.91 4.37 -27.88 -0.12 -3.03 16 11 C -0.01 -0.22 5.96 37.16 0.22 0.00 16 12 Cl -0.20 -2.93 29.15 -51.86 -1.51 -4.44 16 13 C 0.13 3.20 4.50 -104.60 -0.47 2.73 16 14 C -0.44 -11.38 7.15 -37.83 -0.27 -11.66 16 15 H 0.10 2.67 7.14 -52.49 -0.37 2.30 16 16 C 0.13 3.27 3.70 -17.28 -0.06 3.21 16 17 N -0.80 -21.37 13.91 55.57 0.77 -20.60 16 18 Si 0.89 21.02 23.57 -169.99 -4.01 17.02 16 19 H -0.27 -5.96 5.18 56.52 0.29 -5.67 16 20 H -0.29 -6.68 7.11 56.52 0.40 -6.28 16 21 H -0.25 -5.91 6.92 56.52 0.39 -5.52 16 22 H 0.04 0.65 8.14 -51.93 -0.42 0.23 16 23 H 0.06 1.15 7.20 -51.93 -0.37 0.78 16 24 H 0.04 0.70 8.14 -51.93 -0.42 0.28 16 25 H 0.05 0.79 8.05 -51.93 -0.42 0.38 16 26 H 0.07 1.54 7.33 -51.93 -0.38 1.16 16 27 H 0.10 1.61 8.05 -52.49 -0.42 1.18 16 28 H 0.10 1.56 8.06 -52.49 -0.42 1.14 16 29 H 0.10 1.64 7.12 -52.49 -0.37 1.27 16 30 H 0.10 1.44 8.08 -51.93 -0.42 1.02 16 31 H 0.10 1.50 8.13 -51.93 -0.42 1.08 16 32 H 0.10 1.52 8.14 -51.93 -0.42 1.10 16 33 H 0.10 1.67 7.36 -51.93 -0.38 1.29 16 34 H 0.28 7.05 8.29 -40.82 -0.34 6.71 16 LS Contribution 290.32 15.07 4.38 4.38 Total: -1.00 -26.96 290.32 -7.62 -34.58 By element: Atomic # 1 Polarization: 6.94 SS G_CDS: -4.51 Total: 2.43 kcal Atomic # 6 Polarization: -20.03 SS G_CDS: -2.79 Total: -22.82 kcal Atomic # 7 Polarization: -21.37 SS G_CDS: 0.77 Total: -20.60 kcal Atomic # 8 Polarization: -10.60 SS G_CDS: 0.06 Total: -10.54 kcal Atomic # 14 Polarization: 21.02 SS G_CDS: -4.01 Total: 17.02 kcal Atomic # 17 Polarization: -2.93 SS G_CDS: -1.51 Total: -4.44 kcal Total LS contribution 4.38 Total: 4.38 kcal Total: -26.96 -7.62 -34.58 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000396059104.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 1.582 kcal (2) G-P(sol) polarization free energy of solvation -26.959 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -25.377 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.617 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.575 kcal (6) G-S(sol) free energy of system = (1) + (5) -32.994 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds