Wall clock time and date at job start Mon Mar 30 2020 07:41:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.52992 * 109.47438 * 2 1 4 4 H 1.09002 * 109.46844 * 305.00106 * 3 2 1 5 5 C 1.50699 * 109.47625 * 185.00060 * 3 2 1 6 6 H 1.07996 * 120.00429 * 240.00558 * 5 3 2 7 7 C 1.37887 * 119.99702 * 59.99880 * 5 3 2 8 8 N 1.31509 * 119.99730 * 0.02562 * 7 5 3 9 9 Si 1.86794 * 119.99836 * 180.02562 * 7 5 3 10 10 H 1.48500 * 109.47467 * 359.97438 * 9 7 5 11 11 H 1.48497 * 109.47265 * 119.99838 * 9 7 5 12 12 H 1.48508 * 109.46715 * 240.00094 * 9 7 5 13 13 C 1.50698 * 109.47077 * 64.99934 * 3 2 1 14 14 O 1.21271 * 119.99775 * 95.00336 * 13 3 2 15 15 C 1.47074 * 120.00203 * 275.00041 * 13 3 2 16 16 C 1.39907 * 120.18469 * 0.02562 * 15 13 3 17 17 C 1.37817 * 119.84132 * 180.02562 * 16 15 13 18 18 C 1.38473 * 120.20780 * 0.27870 * 17 16 15 19 19 C 1.50703 * 119.81009 * 179.72124 * 18 17 16 20 20 C 1.38300 * 120.37931 * 359.44532 * 18 17 16 21 21 C 1.38100 * 120.15413 * 0.54740 * 20 18 17 22 22 Cl 1.73598 * 120.10926 * 179.70482 * 21 20 18 23 23 H 1.09001 * 109.47096 * 299.99853 * 1 2 3 24 24 H 1.08999 * 109.47435 * 59.99829 * 1 2 3 25 25 H 1.09001 * 109.47239 * 179.97438 * 1 2 3 26 26 H 1.09001 * 109.46888 * 239.99635 * 2 1 3 27 27 H 1.09005 * 109.47122 * 120.00489 * 2 1 3 28 28 H 0.97004 * 119.99987 * 179.97438 * 8 7 5 29 29 H 1.08007 * 120.08226 * 359.97438 * 16 15 13 30 30 H 1.08002 * 119.89279 * 179.97438 * 17 16 15 31 31 H 1.09000 * 109.46992 * 89.99943 * 19 18 17 32 32 H 1.09004 * 109.47386 * 210.00324 * 19 18 17 33 33 H 1.09001 * 109.46971 * 329.99935 * 19 18 17 34 34 H 1.08001 * 119.92614 * 180.30184 * 20 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 1 1.6054 1.9814 -0.8418 5 6 3.5419 1.4442 -0.1238 6 1 4.1473 1.8887 0.6523 7 6 4.1433 0.8783 -1.2281 8 7 3.4061 0.3374 -2.1733 9 14 6.0049 0.8799 -1.3813 10 1 6.5988 1.5452 -0.1939 11 1 6.4962 -0.5191 -1.4628 12 1 6.3998 1.6157 -2.6094 13 6 1.6414 2.1162 1.2877 14 8 2.4159 2.1482 2.2203 15 6 0.3131 2.7349 1.4134 16 6 -0.5837 2.6997 0.3401 17 6 -1.8264 3.2822 0.4654 18 6 -2.1872 3.9065 1.6476 19 6 -3.5461 4.5460 1.7727 20 6 -1.3099 3.9415 2.7161 21 6 -0.0608 3.3627 2.6073 22 17 1.0424 3.4140 3.9467 23 1 -0.3633 0.5138 0.8900 24 1 -0.3634 0.5138 -0.8899 25 1 -0.3634 -1.0277 -0.0005 26 1 1.8933 -0.5139 -0.8900 27 1 1.8933 -0.5139 0.8900 28 1 3.8291 -0.0604 -2.9504 29 1 -0.3025 2.2180 -0.5848 30 1 -2.5192 3.2559 -0.3627 31 1 -4.2585 3.8141 2.1534 32 1 -3.4888 5.3894 2.4609 33 1 -3.8738 4.8972 0.7942 34 1 -1.6007 4.4262 3.6364 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000404641405.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:41:51 Heat of formation + Delta-G solvation = -24.844077 kcal Electronic energy + Delta-G solvation = -18055.382010 eV Core-core repulsion = 15172.069897 eV Total energy + Delta-G solvation = -2883.312113 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 266.081 amu Computer time = 0.38 seconds Orbital eigenvalues (eV) -39.77119 -37.80094 -36.13608 -34.49896 -32.77939 -31.53380 -30.50390 -28.00895 -27.27686 -23.85224 -22.73393 -22.12818 -20.81774 -18.65627 -16.76240 -16.17668 -15.45822 -15.32008 -14.65870 -14.40013 -14.00994 -13.80523 -13.60548 -13.28666 -12.69422 -12.51694 -12.35332 -12.14066 -11.93578 -11.47757 -11.33015 -11.16681 -11.00005 -10.85690 -10.74011 -10.58205 -10.06143 -9.94985 -9.76712 -8.95377 -8.64632 -8.46741 -8.42514 -8.14525 -6.04675 -4.08875 0.94750 1.37623 2.44571 3.11168 3.31004 3.38886 3.46756 4.04215 4.42056 4.71230 4.83747 4.94592 5.20815 5.22769 5.27306 5.45550 5.54068 5.68596 5.84943 5.97104 6.09669 6.10963 6.19524 6.35220 6.41851 6.52432 6.70426 6.81492 6.89874 6.91146 7.14134 7.54188 7.77639 7.99942 8.25386 8.68007 8.97033 9.55807 11.01842 Molecular weight = 266.08amu Principal moments of inertia in cm(-1) A = 0.024441 B = 0.006287 C = 0.005430 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1145.322334 B = 4452.893287 C = 5155.257041 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.160 4.160 2 C -0.110 4.110 3 C 0.014 3.986 4 H 0.051 0.949 5 C -0.504 4.504 6 H 0.068 0.932 7 C 0.061 3.939 8 N -0.893 5.893 9 Si 0.896 3.104 10 H -0.272 1.272 11 H -0.284 1.284 12 H -0.284 1.284 13 C 0.389 3.611 14 O -0.440 6.440 15 C -0.153 4.153 16 C -0.054 4.054 17 C -0.138 4.138 18 C -0.060 4.060 19 C -0.114 4.114 20 C -0.135 4.135 21 C 0.008 3.992 22 Cl -0.045 7.045 23 H 0.042 0.958 24 H 0.051 0.949 25 H 0.038 0.962 26 H 0.105 0.895 27 H 0.038 0.962 28 H 0.261 0.739 29 H 0.153 0.847 30 H 0.129 0.871 31 H 0.073 0.927 32 H 0.067 0.933 33 H 0.069 0.931 34 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.411 5.687 5.121 15.441 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.217 4.217 2 C -0.148 4.148 3 C -0.005 4.005 4 H 0.068 0.932 5 C -0.542 4.542 6 H 0.087 0.913 7 C -0.140 4.140 8 N -0.532 5.532 9 Si 0.724 3.276 10 H -0.196 1.196 11 H -0.210 1.210 12 H -0.210 1.210 13 C 0.266 3.734 14 O -0.313 6.313 15 C -0.154 4.154 16 C -0.072 4.072 17 C -0.156 4.156 18 C -0.061 4.061 19 C -0.170 4.170 20 C -0.154 4.154 21 C -0.020 4.020 22 Cl -0.015 7.015 23 H 0.061 0.939 24 H 0.070 0.930 25 H 0.057 0.943 26 H 0.124 0.876 27 H 0.057 0.943 28 H 0.071 0.929 29 H 0.170 0.830 30 H 0.147 0.853 31 H 0.091 0.909 32 H 0.086 0.914 33 H 0.088 0.912 34 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -12.862 5.623 5.583 15.107 hybrid contribution 0.931 -0.037 -0.095 0.937 sum -11.931 5.586 5.488 14.271 Atomic orbital electron populations 1.22276 0.99214 1.00052 1.00130 1.21499 0.91566 0.98198 1.03513 1.19148 0.97876 0.93287 0.90163 0.93153 1.21148 0.90020 1.37533 1.05473 0.91343 1.24922 0.98432 0.95081 0.95522 1.69856 1.34872 1.38944 1.09558 0.86455 0.85422 0.77731 0.78020 1.19602 1.20972 1.21024 1.23274 0.83195 0.75793 0.91174 1.90451 1.51687 1.48629 1.40556 1.21055 0.99246 1.01989 0.93150 1.21919 0.92135 0.94438 0.98694 1.21090 0.97128 0.99757 0.97655 1.19984 0.95926 0.96944 0.93213 1.20820 0.93051 1.00283 1.02894 1.20816 0.92366 1.02567 0.99651 1.21293 0.91734 0.98941 0.89988 1.98390 1.62532 1.96719 1.43890 0.93913 0.93027 0.94268 0.87640 0.94325 0.92950 0.82960 0.85262 0.90875 0.91418 0.91168 0.85174 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.93 8.23 37.16 0.31 -2.62 16 2 C -0.11 -2.51 5.23 -26.74 -0.14 -2.65 16 3 C 0.01 0.34 1.76 -92.93 -0.16 0.18 16 4 H 0.05 1.24 6.74 -51.93 -0.35 0.89 16 5 C -0.50 -14.02 8.33 -34.44 -0.29 -14.31 16 6 H 0.07 2.00 7.03 -52.49 -0.37 1.63 16 7 C 0.06 1.68 5.29 -17.82 -0.09 1.58 16 8 N -0.89 -24.57 11.29 55.43 0.63 -23.94 16 9 Si 0.90 21.54 29.54 -169.99 -5.02 16.52 16 10 H -0.27 -6.61 7.11 56.52 0.40 -6.20 16 11 H -0.28 -6.75 7.11 56.52 0.40 -6.35 16 12 H -0.28 -6.73 7.11 56.52 0.40 -6.32 16 13 C 0.39 8.88 5.87 -30.73 -0.18 8.70 16 14 O -0.44 -11.00 13.44 5.57 0.07 -10.92 16 15 C -0.15 -2.88 4.92 -105.04 -0.52 -3.39 16 16 C -0.05 -0.86 7.06 -39.11 -0.28 -1.14 16 17 C -0.14 -1.78 9.67 -39.65 -0.38 -2.16 16 18 C -0.06 -0.73 5.89 -104.51 -0.62 -1.34 16 19 C -0.11 -0.95 10.00 36.01 0.36 -0.59 16 20 C -0.14 -1.86 9.46 -39.61 -0.37 -2.23 16 21 C 0.01 0.13 6.36 -38.98 -0.25 -0.12 16 22 Cl -0.04 -0.80 26.03 -51.86 -1.35 -2.15 16 23 H 0.04 0.76 5.31 -51.93 -0.28 0.48 16 24 H 0.05 0.87 6.46 -51.93 -0.34 0.54 16 25 H 0.04 0.65 8.14 -51.93 -0.42 0.23 16 26 H 0.11 2.66 5.95 -51.93 -0.31 2.35 16 27 H 0.04 0.91 8.14 -51.93 -0.42 0.49 16 28 H 0.26 6.84 8.31 -40.82 -0.34 6.50 16 29 H 0.15 2.46 4.25 -52.48 -0.22 2.23 16 30 H 0.13 1.30 8.06 -52.49 -0.42 0.87 16 31 H 0.07 0.54 8.14 -51.93 -0.42 0.11 16 32 H 0.07 0.50 8.08 -51.93 -0.42 0.08 16 33 H 0.07 0.50 8.08 -51.93 -0.42 0.08 16 34 H 0.13 1.49 8.06 -52.49 -0.42 1.06 16 LS Contribution 290.47 15.07 4.38 4.38 Total: -1.00 -29.66 290.47 -7.86 -37.52 By element: Atomic # 1 Polarization: 2.64 SS G_CDS: -3.95 Total: -1.31 kcal Atomic # 6 Polarization: -17.48 SS G_CDS: -2.61 Total: -20.09 kcal Atomic # 7 Polarization: -24.57 SS G_CDS: 0.63 Total: -23.94 kcal Atomic # 8 Polarization: -11.00 SS G_CDS: 0.07 Total: -10.92 kcal Atomic # 14 Polarization: 21.54 SS G_CDS: -5.02 Total: 16.52 kcal Atomic # 17 Polarization: -0.80 SS G_CDS: -1.35 Total: -2.15 kcal Total LS contribution 4.38 Total: 4.38 kcal Total: -29.66 -7.86 -37.52 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000404641405.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 12.674 kcal (2) G-P(sol) polarization free energy of solvation -29.661 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -16.987 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.857 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.518 kcal (6) G-S(sol) free energy of system = (1) + (5) -24.844 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.38 seconds