Wall clock time and date at job start Mon Mar 30 2020 07:32:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.52992 * 109.47482 * 2 1 4 4 C 1.53006 * 109.47127 * 120.00347 * 2 1 3 5 5 H 1.09001 * 109.47002 * 299.99574 * 4 2 1 6 6 C 1.50703 * 109.47126 * 179.97438 * 4 2 1 7 7 O 1.21429 * 120.00089 * 269.99964 * 6 4 2 8 8 C 1.41034 * 119.99801 * 89.99725 * 6 4 2 9 9 H 1.07999 * 119.99847 * 0.02562 * 8 6 4 10 10 C 1.40461 * 119.99591 * 179.97438 * 8 6 4 11 11 N 1.30517 * 119.99906 * 0.02562 * 10 8 6 12 12 Si 1.86802 * 119.99610 * 179.97438 * 10 8 6 13 13 H 1.48496 * 109.47196 * 0.02562 * 12 10 8 14 14 H 1.48500 * 109.47055 * 120.00213 * 12 10 8 15 15 H 1.48496 * 109.47172 * 240.00162 * 12 10 8 16 16 C 1.50701 * 109.47180 * 59.99852 * 4 2 1 17 17 C 1.38242 * 119.98429 * 59.72850 * 16 4 2 18 18 C 1.38220 * 120.00732 * 179.72598 * 17 16 4 19 19 C 1.38355 * 119.98456 * 0.54607 * 18 17 16 20 20 Cl 1.73601 * 120.00905 * 179.70493 * 19 18 17 21 21 C 1.38348 * 119.97619 * 359.72519 * 19 18 17 22 22 C 1.38215 * 119.98803 * 0.02562 * 21 19 18 23 23 H 1.09002 * 109.47153 * 59.99783 * 1 2 3 24 24 H 1.09001 * 109.46832 * 299.99974 * 1 2 3 25 25 H 1.09004 * 109.47261 * 179.97438 * 1 2 3 26 26 H 1.08998 * 109.47533 * 239.99846 * 2 1 3 27 27 H 1.09001 * 109.47066 * 60.00169 * 3 2 1 28 28 H 1.08996 * 109.47747 * 179.97438 * 3 2 1 29 29 H 1.09002 * 109.47103 * 300.00247 * 3 2 1 30 30 H 0.97004 * 119.99422 * 180.02562 * 11 10 8 31 31 H 1.07992 * 119.99688 * 359.97438 * 17 16 4 32 32 H 1.07998 * 120.00281 * 180.26976 * 18 17 16 33 33 H 1.08000 * 120.00641 * 179.97438 * 21 19 18 34 34 H 1.07996 * 119.99376 * 180.02562 * 22 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 2.0400 -0.7214 1.2492 5 1 1.6767 -0.2075 2.1393 6 6 3.5470 -0.7219 1.2489 7 8 4.1537 -1.6329 0.7231 8 6 4.2527 0.3357 1.8593 9 1 3.7130 1.1457 2.3273 10 6 5.6573 0.3349 1.8595 11 7 6.3093 -0.6444 1.2943 12 14 6.5919 1.7360 2.6674 13 1 5.6274 2.7142 3.2313 14 1 7.4453 1.1983 3.7573 15 1 7.4461 2.4092 1.6562 16 6 1.5376 -2.1422 1.2492 17 6 1.8671 -2.9914 0.2093 18 6 1.4113 -4.2963 0.2116 19 6 0.6159 -4.7491 1.2492 20 17 0.0367 -6.3856 1.2489 21 6 0.2819 -3.8970 2.2867 22 6 0.7425 -2.5938 2.2859 23 1 -0.3633 0.5139 -0.8900 24 1 -0.3633 0.5138 0.8900 25 1 -0.3634 -1.0277 -0.0005 26 1 1.8934 -0.5138 -0.8899 27 1 1.6768 1.9562 0.8900 28 1 3.1300 1.4424 0.0005 29 1 1.6767 1.9563 -0.8900 30 1 7.2794 -0.6450 1.2948 31 1 2.4840 -2.6365 -0.6028 32 1 1.6724 -4.9610 -0.5986 33 1 -0.3393 -4.2498 3.0967 34 1 0.4822 -1.9287 3.0960 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000585163890.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:32:22 Heat of formation + Delta-G solvation = -47.153891 kcal Electronic energy + Delta-G solvation = -18056.250767 eV Core-core repulsion = 15171.971228 eV Total energy + Delta-G solvation = -2884.279539 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 266.081 amu Computer time = 2.75 seconds Orbital eigenvalues (eV) -39.38741 -37.24094 -36.01771 -34.73914 -32.68121 -30.69354 -30.46456 -27.90253 -26.24251 -25.60088 -22.41848 -21.40992 -20.43872 -18.59770 -16.63332 -16.48428 -15.40682 -14.99721 -14.71012 -14.05969 -13.83764 -13.43062 -13.13830 -12.97583 -12.90028 -12.34305 -11.89531 -11.68954 -11.54066 -11.48216 -11.25516 -11.09695 -10.94117 -10.82761 -10.59753 -10.46652 -10.34270 -10.01719 -9.99030 -9.81238 -8.94785 -8.54721 -8.05994 -7.33672 -6.25111 -4.91438 1.66735 1.81456 2.45655 3.00747 3.12176 3.15862 3.99522 4.10831 4.25293 5.16163 5.26507 5.29674 5.41587 5.58857 5.76699 5.78680 5.84617 5.93772 6.11801 6.19163 6.26762 6.33209 6.37099 6.47475 6.52900 6.67152 6.70692 6.74572 6.83905 6.92599 7.12479 7.23110 7.30166 7.35621 8.06590 8.79620 8.85690 10.30740 10.53735 Molecular weight = 266.08amu Principal moments of inertia in cm(-1) A = 0.023841 B = 0.005667 C = 0.004991 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1174.146236 B = 4939.523459 C = 5608.758304 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C -0.070 4.070 3 C -0.147 4.147 4 C -0.094 4.094 5 H 0.075 0.925 6 C 0.375 3.625 7 O -0.536 6.536 8 C -0.527 4.527 9 H 0.070 0.930 10 C 0.084 3.916 11 N -0.739 5.739 12 Si 0.900 3.100 13 H -0.260 1.260 14 H -0.274 1.274 15 H -0.274 1.274 16 C -0.035 4.035 17 C -0.069 4.069 18 C -0.117 4.117 19 C -0.048 4.048 20 Cl -0.094 7.094 21 C -0.120 4.120 22 C -0.115 4.115 23 H 0.047 0.953 24 H 0.050 0.950 25 H 0.050 0.950 26 H 0.066 0.934 27 H 0.048 0.952 28 H 0.080 0.920 29 H 0.039 0.961 30 H 0.272 0.728 31 H 0.137 0.863 32 H 0.124 0.876 33 H 0.123 0.877 34 H 0.124 0.876 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.807 -1.285 -0.273 9.894 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.202 4.202 2 C -0.089 4.089 3 C -0.204 4.204 4 C -0.113 4.113 5 H 0.093 0.907 6 C 0.269 3.731 7 O -0.424 6.424 8 C -0.558 4.558 9 H 0.088 0.912 10 C -0.140 4.140 11 N -0.367 5.367 12 Si 0.724 3.276 13 H -0.184 1.184 14 H -0.200 1.200 15 H -0.199 1.199 16 C -0.035 4.035 17 C -0.087 4.087 18 C -0.136 4.136 19 C -0.074 4.074 20 Cl -0.066 7.066 21 C -0.139 4.139 22 C -0.133 4.133 23 H 0.066 0.934 24 H 0.069 0.931 25 H 0.069 0.931 26 H 0.084 0.916 27 H 0.068 0.932 28 H 0.099 0.901 29 H 0.058 0.942 30 H 0.083 0.917 31 H 0.154 0.846 32 H 0.142 0.858 33 H 0.141 0.859 34 H 0.142 0.858 Dipole moment (debyes) X Y Z Total from point charges -9.443 -1.981 -0.592 9.667 hybrid contribution 0.377 0.570 0.616 0.920 sum -9.066 -1.411 0.025 9.175 Atomic orbital electron populations 1.21892 0.96270 1.01171 1.00842 1.20853 0.94163 0.96526 0.97347 1.21910 1.03698 0.94885 0.99910 1.20998 1.01640 0.90334 0.98353 0.90666 1.19292 0.85417 0.87089 0.81311 1.90406 1.69116 1.37796 1.45071 1.20789 0.91473 1.08383 1.35198 0.91178 1.25991 0.98391 0.95882 0.93698 1.69954 1.08414 1.27946 1.30412 0.86427 0.79895 0.81707 0.79584 1.18403 1.19970 1.19926 1.19947 0.93734 0.96664 0.93183 1.21101 0.96366 0.91861 0.99353 1.21012 0.98067 0.96662 0.97867 1.20779 1.02667 0.85380 0.98616 1.98318 1.88120 1.21571 1.98584 1.20833 1.01786 0.93527 0.97706 1.21006 0.98526 0.94947 0.98799 0.93438 0.93089 0.93054 0.91561 0.93244 0.90138 0.94217 0.91707 0.84570 0.85766 0.85880 0.85774 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.14 8.95 37.16 0.33 -1.81 16 2 C -0.07 -1.26 2.31 -90.62 -0.21 -1.47 16 3 C -0.15 -2.56 8.62 37.15 0.32 -2.24 16 4 C -0.09 -1.91 1.89 -92.92 -0.18 -2.09 16 5 H 0.07 1.47 7.83 -51.93 -0.41 1.06 16 6 C 0.38 9.65 5.37 -33.25 -0.18 9.47 16 7 O -0.54 -15.66 13.10 5.43 0.07 -15.59 16 8 C -0.53 -13.62 7.39 -37.69 -0.28 -13.90 16 9 H 0.07 1.69 7.85 -52.49 -0.41 1.27 16 10 C 0.08 2.16 5.50 -17.27 -0.10 2.07 16 11 N -0.74 -20.61 11.72 55.57 0.65 -19.96 16 12 Si 0.90 18.84 29.56 -169.99 -5.03 13.81 16 13 H -0.26 -5.28 7.11 56.52 0.40 -4.88 16 14 H -0.27 -5.70 7.11 56.52 0.40 -5.30 16 15 H -0.27 -5.64 7.11 56.52 0.40 -5.24 16 16 C -0.04 -0.68 3.42 -104.62 -0.36 -1.04 16 17 C -0.07 -1.34 7.94 -39.59 -0.31 -1.65 16 18 C -0.12 -2.04 9.83 -39.54 -0.39 -2.43 16 19 C -0.05 -0.79 6.32 -39.50 -0.25 -1.04 16 20 Cl -0.09 -1.36 28.96 -51.86 -1.50 -2.86 16 21 C -0.12 -1.90 9.83 -39.55 -0.39 -2.29 16 22 C -0.11 -1.96 9.67 -39.59 -0.38 -2.34 16 23 H 0.05 0.63 8.14 -51.93 -0.42 0.21 16 24 H 0.05 0.71 8.14 -51.93 -0.42 0.28 16 25 H 0.05 0.77 7.22 -51.93 -0.37 0.39 16 26 H 0.07 1.26 7.37 -51.93 -0.38 0.88 16 27 H 0.05 0.81 8.14 -51.93 -0.42 0.39 16 28 H 0.08 1.64 6.17 -51.93 -0.32 1.32 16 29 H 0.04 0.60 8.14 -51.93 -0.42 0.17 16 30 H 0.27 6.87 8.29 -40.82 -0.34 6.53 16 31 H 0.14 2.84 6.77 -52.49 -0.36 2.48 16 32 H 0.12 1.93 8.06 -52.49 -0.42 1.50 16 33 H 0.12 1.65 8.06 -52.49 -0.42 1.23 16 34 H 0.12 1.87 7.94 -52.49 -0.42 1.45 16 LS Contribution 299.83 15.07 4.52 4.52 Total: -1.00 -29.08 299.83 -7.99 -37.07 By element: Atomic # 1 Polarization: 8.10 SS G_CDS: -4.34 Total: 3.76 kcal Atomic # 6 Polarization: -18.38 SS G_CDS: -2.37 Total: -20.75 kcal Atomic # 7 Polarization: -20.61 SS G_CDS: 0.65 Total: -19.96 kcal Atomic # 8 Polarization: -15.66 SS G_CDS: 0.07 Total: -15.59 kcal Atomic # 14 Polarization: 18.84 SS G_CDS: -5.03 Total: 13.81 kcal Atomic # 17 Polarization: -1.36 SS G_CDS: -1.50 Total: -2.86 kcal Total LS contribution 4.52 Total: 4.52 kcal Total: -29.08 -7.99 -37.07 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000585163890.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -10.087 kcal (2) G-P(sol) polarization free energy of solvation -29.076 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -39.162 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.992 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.067 kcal (6) G-S(sol) free energy of system = (1) + (5) -47.154 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.75 seconds