Wall clock time and date at job start Mon Mar 30 2020 07:23:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52992 * 1 3 3 C 1.53005 * 109.47210 * 2 1 4 4 C 1.53002 * 109.47221 * 239.99815 * 2 1 3 5 5 C 1.50702 * 109.47251 * 119.99663 * 2 1 3 6 6 C 1.38515 * 119.90166 * 0.02562 * 5 2 1 7 7 C 1.38343 * 120.33906 * 179.97438 * 6 5 2 8 8 C 1.38082 * 120.14008 * 0.28022 * 7 6 5 9 9 Cl 1.73597 * 120.09838 * 179.70125 * 8 7 6 10 10 C 1.39885 * 119.80014 * 359.44859 * 8 7 6 11 11 C 1.47758 * 120.16176 * 180.28174 * 10 8 7 12 12 O 1.21768 * 120.00194 * 0.26659 * 11 10 8 13 13 C 1.41817 * 119.99741 * 180.27319 * 11 10 8 14 14 H 1.08007 * 120.00198 * 359.97438 * 13 11 10 15 15 C 1.40342 * 120.00328 * 179.97438 * 13 11 10 16 16 N 1.30532 * 119.99427 * 359.97438 * 15 13 11 17 17 Si 1.86800 * 120.00311 * 179.97438 * 15 13 11 18 18 H 1.48495 * 109.47379 * 59.99812 * 17 15 13 19 19 H 1.48503 * 109.46832 * 180.02562 * 17 15 13 20 20 H 1.48503 * 109.47040 * 299.99966 * 17 15 13 21 21 C 1.37830 * 119.90652 * 179.97438 * 5 2 1 22 22 H 1.08998 * 109.47114 * 300.00400 * 1 2 3 23 23 H 1.09005 * 109.47280 * 60.00013 * 1 2 3 24 24 H 1.08995 * 109.47335 * 180.02562 * 1 2 3 25 25 H 1.09005 * 109.47329 * 180.02562 * 3 2 1 26 26 H 1.09002 * 109.46901 * 299.99226 * 3 2 1 27 27 H 1.08998 * 109.47409 * 59.99780 * 3 2 1 28 28 H 1.08995 * 109.46866 * 300.00165 * 4 2 1 29 29 H 1.08997 * 109.46982 * 60.00156 * 4 2 1 30 30 H 1.08998 * 109.47144 * 180.02562 * 4 2 1 31 31 H 1.07999 * 119.82823 * 359.95229 * 6 5 2 32 32 H 1.08002 * 119.92728 * 179.97438 * 7 6 5 33 33 H 0.97001 * 119.99937 * 179.97438 * 16 15 13 34 34 H 1.08003 * 120.06789 * 0.02562 * 21 5 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0399 -0.7213 -1.2492 5 6 2.0323 -0.7103 1.2305 6 6 1.1304 -1.2364 2.1407 7 6 1.5816 -1.8907 3.2731 8 6 2.9366 -2.0186 3.5063 9 17 3.5015 -2.8331 4.9315 10 6 3.8526 -1.4946 2.5881 11 6 5.3042 -1.6324 2.8266 12 8 5.7058 -2.2075 3.8220 13 6 6.2298 -1.0947 1.8964 14 1 5.8736 -0.5849 1.0133 15 6 7.6087 -1.2251 2.1231 16 7 8.0391 -1.8408 3.1905 17 14 8.8278 -0.5175 0.8974 18 1 8.6202 0.9484 0.7826 19 1 10.2117 -0.7870 1.3639 20 1 8.6208 -1.1521 -0.4292 21 6 3.3878 -0.8356 1.4464 22 1 -0.3633 0.5139 0.8899 23 1 -0.3634 0.5138 -0.8900 24 1 -0.3634 -1.0276 0.0005 25 1 3.1300 1.4426 -0.0005 26 1 1.6767 1.9563 -0.8901 27 1 1.6766 1.9564 0.8899 28 1 1.6766 -1.7489 -1.2492 29 1 1.6766 -0.2075 -2.1392 30 1 3.1299 -0.7217 -1.2490 31 1 0.0695 -1.1349 1.9657 32 1 0.8725 -2.2980 3.9786 33 1 8.9921 -1.9313 3.3471 34 1 4.0892 -0.4250 0.7352 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000702191999.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:23:28 Heat of formation + Delta-G solvation = -36.122816 kcal Electronic energy + Delta-G solvation = -17962.156045 eV Core-core repulsion = 15078.354849 eV Total energy + Delta-G solvation = -2883.801196 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 266.081 amu Computer time = 0.37 seconds Orbital eigenvalues (eV) -39.44886 -36.96831 -35.72008 -34.93295 -32.65857 -30.83332 -29.08030 -27.48464 -27.09210 -26.59975 -22.83434 -22.19929 -20.31640 -18.29835 -16.76569 -16.29472 -15.14103 -14.92276 -14.66053 -14.14731 -13.87766 -13.43861 -13.20840 -12.98050 -12.76155 -12.20781 -12.07995 -11.74075 -11.58090 -11.55642 -11.54105 -11.16601 -10.98372 -10.90700 -10.62315 -10.45139 -10.36644 -10.32712 -10.09441 -9.88296 -8.97593 -8.19534 -7.80799 -7.30242 -6.25759 -4.89206 1.69215 1.85680 3.05974 3.11181 3.11828 3.13325 3.94458 3.99882 4.57469 4.79359 4.93471 5.12488 5.40590 5.46379 5.52973 5.63768 5.73433 5.79523 5.86427 5.89851 5.93981 6.02377 6.03672 6.11911 6.19202 6.39975 6.42349 6.44957 6.58518 6.84023 6.98923 7.11576 7.24592 7.46900 8.01331 8.78792 8.81429 10.32004 10.53915 Molecular weight = 266.08amu Principal moments of inertia in cm(-1) A = 0.015550 B = 0.008070 C = 0.005513 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1800.186567 B = 3468.721645 C = 5077.835921 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C -0.026 4.026 3 C -0.139 4.139 4 C -0.139 4.139 5 C -0.089 4.089 6 C -0.123 4.123 7 C -0.128 4.128 8 C -0.018 4.018 9 Cl -0.052 7.052 10 C -0.095 4.095 11 C 0.381 3.619 12 O -0.513 6.513 13 C -0.516 4.516 14 H 0.071 0.929 15 C 0.081 3.919 16 N -0.733 5.733 17 Si 0.904 3.096 18 H -0.265 1.265 19 H -0.278 1.278 20 H -0.265 1.265 21 C -0.078 4.078 22 H 0.057 0.943 23 H 0.054 0.946 24 H 0.057 0.943 25 H 0.062 0.938 26 H 0.053 0.947 27 H 0.055 0.945 28 H 0.055 0.945 29 H 0.053 0.947 30 H 0.062 0.938 31 H 0.124 0.876 32 H 0.121 0.879 33 H 0.274 0.726 34 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.575 3.793 -6.559 13.835 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.198 4.198 2 C -0.026 4.026 3 C -0.196 4.196 4 C -0.196 4.196 5 C -0.089 4.089 6 C -0.141 4.141 7 C -0.147 4.147 8 C -0.045 4.045 9 Cl -0.023 7.023 10 C -0.097 4.097 11 C 0.275 3.725 12 O -0.401 6.401 13 C -0.547 4.547 14 H 0.089 0.911 15 C -0.143 4.143 16 N -0.362 5.362 17 Si 0.728 3.272 18 H -0.189 1.189 19 H -0.203 1.203 20 H -0.189 1.189 21 C -0.096 4.096 22 H 0.076 0.924 23 H 0.073 0.927 24 H 0.076 0.924 25 H 0.081 0.919 26 H 0.072 0.928 27 H 0.074 0.926 28 H 0.074 0.926 29 H 0.073 0.927 30 H 0.081 0.919 31 H 0.141 0.859 32 H 0.139 0.861 33 H 0.085 0.915 34 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -11.218 3.358 -5.803 13.068 hybrid contribution 0.516 0.321 -0.556 0.823 sum -10.702 3.678 -6.359 12.980 Atomic orbital electron populations 1.21941 0.94643 1.01720 1.01515 1.19439 0.95186 0.95068 0.92918 1.21901 1.01795 0.94587 1.01359 1.21898 1.01797 1.00074 0.95873 1.19788 0.93585 0.99532 0.95971 1.20990 0.99205 0.99671 0.94239 1.20900 0.93512 1.01710 0.98607 1.21224 0.92936 0.99338 0.91043 1.98355 1.89975 1.77000 1.36923 1.21850 1.00021 0.95248 0.92580 1.18094 0.83681 0.82803 0.87903 1.90589 1.79246 1.41216 1.29029 1.20853 0.91390 1.34393 1.08052 0.91065 1.25951 0.99389 0.93663 0.95247 1.69945 1.15583 1.28013 1.22665 0.86473 0.79185 0.80299 0.81266 1.18927 1.20264 1.18931 1.21307 0.94174 0.97395 0.96757 0.92416 0.92739 0.92411 0.91937 0.92752 0.92601 0.92606 0.92745 0.91935 0.85854 0.86070 0.91454 0.84814 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.48 7.13 37.15 0.26 -1.22 16 2 C -0.03 -0.33 0.85 -155.66 -0.13 -0.47 16 3 C -0.14 -1.70 8.28 37.16 0.31 -1.39 16 4 C -0.14 -1.69 8.29 37.16 0.31 -1.39 16 5 C -0.09 -1.44 4.76 -104.67 -0.50 -1.94 16 6 C -0.12 -1.92 8.98 -39.44 -0.35 -2.27 16 7 C -0.13 -2.26 9.82 -39.60 -0.39 -2.65 16 8 C -0.02 -0.40 6.36 -39.02 -0.25 -0.64 16 9 Cl -0.05 -1.16 26.03 -51.86 -1.35 -2.51 16 10 C -0.09 -2.23 5.89 -104.81 -0.62 -2.85 16 11 C 0.38 10.68 6.91 -34.32 -0.24 10.44 16 12 O -0.51 -15.88 12.52 5.13 0.06 -15.81 16 13 C -0.52 -13.95 8.86 -37.42 -0.33 -14.28 16 14 H 0.07 1.74 6.03 -52.48 -0.32 1.42 16 15 C 0.08 2.15 5.50 -17.31 -0.10 2.05 16 16 N -0.73 -20.93 11.73 55.57 0.65 -20.28 16 17 Si 0.90 19.10 29.56 -169.99 -5.03 14.07 16 18 H -0.26 -5.44 7.11 56.52 0.40 -5.04 16 19 H -0.28 -5.74 7.11 56.52 0.40 -5.34 16 20 H -0.26 -5.44 7.11 56.52 0.40 -5.04 16 21 C -0.08 -1.53 8.09 -39.16 -0.32 -1.85 16 22 H 0.06 0.59 7.51 -51.93 -0.39 0.20 16 23 H 0.05 0.49 8.14 -51.93 -0.42 0.07 16 24 H 0.06 0.59 7.50 -51.93 -0.39 0.20 16 25 H 0.06 0.82 7.38 -51.93 -0.38 0.44 16 26 H 0.05 0.55 8.14 -51.93 -0.42 0.13 16 27 H 0.05 0.68 8.14 -51.93 -0.42 0.26 16 28 H 0.05 0.68 8.14 -51.93 -0.42 0.26 16 29 H 0.05 0.55 8.14 -51.93 -0.42 0.13 16 30 H 0.06 0.82 7.38 -51.93 -0.38 0.44 16 31 H 0.12 1.55 5.87 -52.49 -0.31 1.24 16 32 H 0.12 1.82 8.06 -52.49 -0.42 1.40 16 33 H 0.27 7.07 8.29 -40.82 -0.34 6.73 16 34 H 0.13 2.57 5.23 -52.48 -0.27 2.30 16 LS Contribution 294.83 15.07 4.44 4.44 Total: -1.00 -31.06 294.83 -7.67 -38.73 By element: Atomic # 1 Polarization: 3.92 SS G_CDS: -4.12 Total: -0.20 kcal Atomic # 6 Polarization: -16.10 SS G_CDS: -2.34 Total: -18.44 kcal Atomic # 7 Polarization: -20.93 SS G_CDS: 0.65 Total: -20.28 kcal Atomic # 8 Polarization: -15.88 SS G_CDS: 0.06 Total: -15.81 kcal Atomic # 14 Polarization: 19.10 SS G_CDS: -5.03 Total: 14.07 kcal Atomic # 17 Polarization: -1.16 SS G_CDS: -1.35 Total: -2.51 kcal Total LS contribution 4.44 Total: 4.44 kcal Total: -31.06 -7.67 -38.73 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000702191999.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 2.603 kcal (2) G-P(sol) polarization free energy of solvation -31.056 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -28.453 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.670 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.726 kcal (6) G-S(sol) free energy of system = (1) + (5) -36.123 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds