Wall clock time and date at job start Mon Mar 30 2020 06:27:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.52998 * 109.46700 * 2 1 4 4 H 1.08999 * 109.72024 * 304.38213 * 3 2 1 5 5 C 1.53969 * 109.88840 * 183.69506 * 3 2 1 6 6 N 1.47045 * 108.01370 * 297.19088 * 5 3 2 7 7 C 1.36801 * 120.57579 * 134.87202 * 6 5 3 8 8 H 1.08005 * 119.99346 * 206.00516 * 7 6 5 9 9 C 1.38738 * 120.00327 * 25.72575 * 7 6 5 10 10 N 1.31633 * 120.00156 * 16.07487 * 9 7 6 11 11 Si 1.86800 * 119.99936 * 196.07557 * 9 7 6 12 12 H 1.48494 * 109.47515 * 89.99957 * 11 9 7 13 13 H 1.48504 * 109.47071 * 210.00234 * 11 9 7 14 14 H 1.48502 * 109.47212 * 329.99825 * 11 9 7 15 15 C 1.39638 * 118.83959 * 314.59644 * 6 5 3 16 16 C 1.38813 * 120.27435 * 196.79659 * 15 6 5 17 17 C 1.38186 * 119.87713 * 180.09741 * 16 15 6 18 18 C 1.38475 * 120.25847 * 359.97438 * 17 16 15 19 19 Cl 1.73598 * 119.87365 * 179.97438 * 18 17 16 20 20 C 1.38399 * 120.25782 * 359.96882 * 18 17 16 21 21 C 1.38587 * 119.86986 * 0.02562 * 20 18 17 22 22 N 1.39990 * 120.26817 * 180.08266 * 21 20 18 23 23 H 1.09000 * 109.47057 * 179.97438 * 1 2 3 24 24 H 1.08996 * 109.47613 * 300.00106 * 1 2 3 25 25 H 1.09000 * 109.47411 * 60.00232 * 1 2 3 26 26 H 1.08994 * 109.46956 * 240.00240 * 2 1 3 27 27 H 1.09004 * 109.46687 * 119.99795 * 2 1 3 28 28 H 1.08997 * 109.89303 * 177.53527 * 5 3 2 29 29 H 1.08999 * 109.74209 * 56.76392 * 5 3 2 30 30 H 0.96998 * 119.99823 * 184.98824 * 10 9 7 31 31 H 1.08004 * 120.06466 * 0.07496 * 16 15 6 32 32 H 1.07992 * 119.86930 * 179.97438 * 17 16 15 33 33 H 1.07994 * 120.06299 * 180.02562 * 20 18 17 34 34 H 0.97001 * 120.62564 * 16.54736 * 22 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 1 1.6162 1.9824 -0.8468 5 6 3.5767 1.4548 -0.0933 6 7 4.1104 0.7929 1.1064 7 6 5.1189 -0.1257 1.0038 8 1 5.2281 -0.8937 1.7553 9 6 5.9977 -0.0744 -0.0685 10 7 6.0731 1.0132 -0.8062 11 14 7.0741 -1.5486 -0.4654 12 1 6.3606 -2.4417 -1.4132 13 1 8.3423 -1.0837 -1.0825 14 1 7.3753 -2.2923 0.7842 15 6 3.5739 1.1228 2.3526 16 6 4.2585 0.8012 3.5166 17 6 3.7190 1.1297 4.7456 18 6 2.4982 1.7790 4.8207 19 17 1.8294 2.1864 6.3700 20 6 1.8093 2.1046 3.6654 21 6 2.3430 1.7790 2.4286 22 7 1.6541 2.1059 1.2546 23 1 -0.3633 -1.0277 -0.0005 24 1 -0.3634 0.5138 0.8899 25 1 -0.3634 0.5138 -0.8900 26 1 1.8933 -0.5138 -0.8900 27 1 1.8933 -0.5138 0.8901 28 1 3.9374 2.4825 -0.1373 29 1 3.8958 0.9141 -0.9843 30 1 6.6332 1.0242 -1.5981 31 1 5.2109 0.2948 3.4618 32 1 4.2515 0.8790 5.6511 33 1 0.8577 2.6114 3.7276 34 1 0.9359 2.7578 1.2683 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000076929437.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:27:56 Heat of formation + Delta-G solvation = 28.451196 kcal Electronic energy + Delta-G solvation = -18454.971949 eV Core-core repulsion = 15606.263643 eV Total energy + Delta-G solvation = -2848.708306 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 266.088 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -39.47254 -36.60697 -35.30057 -34.94032 -32.01844 -31.80851 -28.93111 -28.72194 -26.70778 -24.18662 -22.99535 -21.80225 -21.20264 -18.57203 -17.38066 -16.80184 -16.26574 -15.17671 -14.54092 -14.15139 -14.01595 -13.69473 -13.46530 -13.12633 -12.89160 -12.69827 -12.24803 -11.79339 -11.55382 -11.37510 -11.23758 -11.08445 -10.82105 -10.69094 -10.56759 -10.46676 -10.29484 -10.21725 -9.81822 -9.21044 -9.10212 -8.45457 -7.17644 -6.47987 -6.19695 -3.77518 2.35510 2.48428 3.09812 3.12255 3.17274 3.19442 3.99936 4.20660 4.61999 4.89622 5.04239 5.34658 5.53394 5.58727 5.69877 5.92459 6.00739 6.07192 6.13276 6.28501 6.35893 6.45301 6.60698 6.65436 6.80084 6.89000 6.96445 7.08712 7.23058 7.31087 7.40826 7.59477 7.90415 8.14393 8.50354 8.59688 9.22825 9.60563 10.58837 Molecular weight = 266.09amu Principal moments of inertia in cm(-1) A = 0.018917 B = 0.007220 C = 0.005729 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1479.791596 B = 3876.928167 C = 4886.632172 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C -0.129 4.129 3 C 0.132 3.868 4 H 0.077 0.923 5 C 0.137 3.863 6 N -0.445 5.445 7 C -0.293 4.293 8 H 0.092 0.908 9 C 0.026 3.974 10 N -0.874 5.874 11 Si 0.920 3.080 12 H -0.278 1.278 13 H -0.284 1.284 14 H -0.269 1.269 15 C 0.170 3.830 16 C -0.179 4.179 17 C -0.097 4.097 18 C -0.103 4.103 19 Cl -0.120 7.120 20 C -0.137 4.137 21 C 0.122 3.878 22 N -0.750 5.750 23 H 0.045 0.955 24 H 0.053 0.947 25 H 0.044 0.956 26 H 0.062 0.938 27 H 0.070 0.930 28 H 0.053 0.947 29 H 0.096 0.904 30 H 0.268 0.732 31 H 0.124 0.876 32 H 0.109 0.891 33 H 0.110 0.890 34 H 0.389 0.611 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.327 0.319 1.522 7.490 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.201 4.201 2 C -0.168 4.168 3 C 0.025 3.975 4 H 0.095 0.905 5 C 0.012 3.988 6 N -0.134 5.134 7 C -0.422 4.422 8 H 0.110 0.890 9 C -0.178 4.178 10 N -0.511 5.511 11 Si 0.747 3.253 12 H -0.204 1.204 13 H -0.209 1.209 14 H -0.194 1.194 15 C 0.054 3.946 16 C -0.205 4.205 17 C -0.118 4.118 18 C -0.134 4.134 19 Cl -0.092 7.092 20 C -0.162 4.162 21 C 0.019 3.981 22 N -0.384 5.384 23 H 0.064 0.936 24 H 0.072 0.928 25 H 0.064 0.936 26 H 0.081 0.919 27 H 0.088 0.912 28 H 0.071 0.929 29 H 0.114 0.886 30 H 0.078 0.922 31 H 0.141 0.859 32 H 0.127 0.873 33 H 0.128 0.872 34 H 0.223 0.777 Dipole moment (debyes) X Y Z Total from point charges -6.972 0.252 1.055 7.056 hybrid contribution 0.256 -0.335 -0.182 0.459 sum -6.716 -0.083 0.874 6.773 Atomic orbital electron populations 1.21697 0.96588 1.00723 1.01067 1.21836 0.94932 0.97294 1.02719 1.21685 0.96936 0.92650 0.86196 0.90457 1.21882 0.88569 0.97904 0.90485 1.42430 1.32571 1.37677 1.00723 1.19533 1.05857 1.05783 1.11002 0.89017 1.25300 0.96778 0.97334 0.98360 1.70093 1.39439 1.25067 1.16498 0.86008 0.79227 0.81062 0.79021 1.20398 1.20939 1.19361 1.17756 0.91493 0.97865 0.87500 1.20214 1.01046 1.09403 0.89844 1.20367 0.94216 1.00094 0.97129 1.19818 0.97983 1.11831 0.83723 1.98250 1.86235 1.93511 1.31185 1.19821 0.99904 1.06988 0.89468 1.16984 0.91253 1.03876 0.86034 1.44284 1.40730 1.48197 1.05158 0.93563 0.92754 0.93638 0.91915 0.91161 0.92878 0.88575 0.92166 0.85861 0.87285 0.87200 0.77746 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.99 9.80 37.16 0.36 -1.63 16 2 C -0.13 -2.17 5.32 -26.73 -0.14 -2.32 16 3 C 0.13 2.29 3.30 -67.11 -0.22 2.07 16 4 H 0.08 1.15 8.14 -51.93 -0.42 0.73 16 5 C 0.14 2.95 4.64 -3.24 -0.02 2.93 16 6 N -0.45 -10.45 2.45 -111.99 -0.27 -10.73 16 7 C -0.29 -7.27 8.68 -15.15 -0.13 -7.41 16 8 H 0.09 2.26 7.08 -52.48 -0.37 1.89 16 9 C 0.03 0.64 4.95 -17.45 -0.09 0.55 16 10 N -0.87 -22.28 11.13 55.49 0.62 -21.67 16 11 Si 0.92 19.30 29.58 -169.99 -5.03 14.27 16 12 H -0.28 -5.78 7.11 56.52 0.40 -5.37 16 13 H -0.28 -6.02 7.11 56.52 0.40 -5.62 16 14 H -0.27 -5.59 7.11 56.52 0.40 -5.19 16 15 C 0.17 3.81 5.89 -83.55 -0.49 3.32 16 16 C -0.18 -3.87 9.23 -39.39 -0.36 -4.23 16 17 C -0.10 -1.89 9.81 -39.51 -0.39 -2.28 16 18 C -0.10 -1.95 6.32 -39.43 -0.25 -2.19 16 19 Cl -0.12 -1.99 28.95 -51.86 -1.50 -3.50 16 20 C -0.14 -2.56 9.71 -39.39 -0.38 -2.94 16 21 C 0.12 2.43 6.20 -83.46 -0.52 1.91 16 22 N -0.75 -12.87 4.97 -51.11 -0.25 -13.12 16 23 H 0.05 0.60 8.14 -51.93 -0.42 0.18 16 24 H 0.05 0.77 7.77 -51.93 -0.40 0.37 16 25 H 0.04 0.56 8.14 -51.93 -0.42 0.13 16 26 H 0.06 1.05 8.14 -51.93 -0.42 0.63 16 27 H 0.07 1.40 7.18 -51.93 -0.37 1.03 16 28 H 0.05 1.24 8.14 -51.93 -0.42 0.82 16 29 H 0.10 2.20 6.38 -51.93 -0.33 1.87 16 30 H 0.27 6.51 8.32 -40.82 -0.34 6.17 16 31 H 0.12 2.70 6.83 -52.48 -0.36 2.35 16 32 H 0.11 1.91 8.06 -52.49 -0.42 1.49 16 33 H 0.11 1.84 8.06 -52.49 -0.42 1.42 16 34 H 0.39 5.68 8.90 -40.82 -0.36 5.31 16 LS Contribution 291.54 15.07 4.39 4.39 Total: -1.00 -25.39 291.54 -8.97 -34.36 By element: Atomic # 1 Polarization: 12.48 SS G_CDS: -4.30 Total: 8.19 kcal Atomic # 6 Polarization: -9.58 SS G_CDS: -2.63 Total: -12.21 kcal Atomic # 7 Polarization: -45.60 SS G_CDS: 0.09 Total: -45.51 kcal Atomic # 14 Polarization: 19.30 SS G_CDS: -5.03 Total: 14.27 kcal Atomic # 17 Polarization: -1.99 SS G_CDS: -1.50 Total: -3.50 kcal Total LS contribution 4.39 Total: 4.39 kcal Total: -25.39 -8.97 -34.36 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000076929437.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 62.812 kcal (2) G-P(sol) polarization free energy of solvation -25.394 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 37.418 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.967 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.361 kcal (6) G-S(sol) free energy of system = (1) + (5) 28.451 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds