Wall clock time and date at job start Mon Mar 30 2020 06:27:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53008 * 1 3 3 C 1.52995 * 109.46884 * 2 1 4 4 H 1.08995 * 109.71897 * 55.60327 * 3 2 1 5 5 C 1.53558 * 109.71513 * 176.25239 * 3 2 1 6 6 N 1.47042 * 108.21433 * 63.06957 * 5 3 2 7 7 C 1.36796 * 120.58758 * 225.12359 * 6 5 3 8 8 H 1.08001 * 120.00189 * 154.83320 * 7 6 5 9 9 C 1.38745 * 120.00104 * 334.83915 * 7 6 5 10 10 N 1.31633 * 119.99994 * 343.28147 * 9 7 6 11 11 Si 1.86809 * 119.99985 * 163.28213 * 9 7 6 12 12 H 1.48501 * 109.47048 * 60.00119 * 11 9 7 13 13 H 1.48495 * 109.46794 * 179.97438 * 11 9 7 14 14 H 1.48492 * 109.47058 * 299.99912 * 11 9 7 15 15 C 1.39652 * 118.82612 * 45.15433 * 6 5 3 16 16 C 1.38820 * 120.26798 * 163.39209 * 15 6 5 17 17 C 1.38174 * 119.87396 * 179.81457 * 16 15 6 18 18 C 1.38478 * 120.25674 * 359.97438 * 17 16 15 19 19 Cl 1.73599 * 119.87326 * 180.02562 * 18 17 16 20 20 C 1.38389 * 120.25707 * 0.03990 * 18 17 16 21 21 C 1.38581 * 119.88169 * 359.97438 * 20 18 17 22 22 N 1.39990 * 120.28403 * 179.90145 * 21 20 18 23 23 H 1.08996 * 109.47135 * 180.02562 * 1 2 3 24 24 H 1.09006 * 109.46942 * 300.00454 * 1 2 3 25 25 H 1.08997 * 109.46962 * 59.99853 * 1 2 3 26 26 H 1.08993 * 109.46671 * 239.99661 * 2 1 3 27 27 H 1.09004 * 109.46767 * 119.99807 * 2 1 3 28 28 H 1.09001 * 109.71484 * 182.74943 * 5 3 2 29 29 H 1.08996 * 109.71352 * 303.39076 * 5 3 2 30 30 H 0.96996 * 119.99567 * 185.03804 * 10 9 7 31 31 H 1.08006 * 120.05989 * 359.80058 * 16 15 6 32 32 H 1.07997 * 119.86822 * 180.02562 * 17 16 15 33 33 H 1.08001 * 120.06379 * 180.02562 * 20 18 17 34 34 H 0.96997 * 120.61673 * 343.52016 * 22 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 1 1.6161 1.9824 0.8466 5 6 3.5727 1.4501 0.0945 6 7 4.1104 0.7928 -1.1059 7 6 5.1175 -0.1273 -1.0036 8 1 5.2371 -0.8839 -1.7650 9 6 5.9851 -0.0888 0.0784 10 7 6.0622 0.9946 0.8220 11 14 7.0439 -1.5746 0.4800 12 1 7.9248 -1.8816 -0.6754 13 1 7.8776 -1.2802 1.6730 14 1 6.1713 -2.7427 0.7613 15 6 3.5753 1.1251 -2.3523 16 6 4.2612 0.8049 -3.5160 17 6 3.7224 1.1340 -4.7451 18 6 2.5007 1.7816 -4.8206 19 17 1.8327 2.1898 -6.3700 20 6 1.8103 2.1048 -3.6656 21 6 2.3432 1.7788 -2.4286 22 7 1.6529 2.1036 -1.2548 23 1 -0.3633 -1.0276 0.0005 24 1 -0.3633 0.5139 0.8900 25 1 -0.3633 0.5138 -0.8900 26 1 1.8933 -0.5139 -0.8899 27 1 1.8934 -0.5138 0.8900 28 1 3.9329 2.4777 0.1436 29 1 3.8889 0.9060 0.9844 30 1 6.7199 1.0491 1.5328 31 1 5.2142 0.2997 -3.4608 32 1 4.2558 0.8845 -5.6504 33 1 0.8575 2.6095 -3.7281 34 1 0.9333 2.7539 -1.2687 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000076929438.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:27:59 Heat of formation + Delta-G solvation = 29.182460 kcal Electronic energy + Delta-G solvation = -18456.042921 eV Core-core repulsion = 15607.366325 eV Total energy + Delta-G solvation = -2848.676596 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 266.088 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -39.47442 -36.60675 -35.29635 -34.93686 -32.01054 -31.81345 -28.93873 -28.71537 -26.70730 -24.18439 -22.99143 -21.79620 -21.19580 -18.56575 -17.36794 -16.80327 -16.26639 -15.17600 -14.54453 -14.14641 -14.00359 -13.70074 -13.47004 -13.12158 -12.88538 -12.69119 -12.24782 -11.77811 -11.54287 -11.35792 -11.23599 -11.06035 -10.81594 -10.72877 -10.57427 -10.46096 -10.29228 -10.22005 -9.81937 -9.21427 -9.09677 -8.45908 -7.15196 -6.47279 -6.22334 -3.74534 2.36422 2.49490 3.10823 3.12441 3.15348 3.17335 3.98333 4.21081 4.62337 4.89074 5.04251 5.35308 5.53861 5.59192 5.70677 5.93029 6.01510 6.08002 6.13417 6.29324 6.36581 6.46363 6.61503 6.66235 6.80724 6.89881 6.97086 7.09660 7.23986 7.31708 7.42149 7.60564 7.90964 8.15080 8.51010 8.59382 9.22854 9.60323 10.58361 Molecular weight = 266.09amu Principal moments of inertia in cm(-1) A = 0.018972 B = 0.007212 C = 0.005730 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1475.524366 B = 3881.367750 C = 4885.435288 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C -0.129 4.129 3 C 0.133 3.867 4 H 0.078 0.922 5 C 0.137 3.863 6 N -0.444 5.444 7 C -0.297 4.297 8 H 0.092 0.908 9 C 0.027 3.973 10 N -0.876 5.876 11 Si 0.923 3.077 12 H -0.273 1.273 13 H -0.284 1.284 14 H -0.273 1.273 15 C 0.169 3.831 16 C -0.180 4.180 17 C -0.096 4.096 18 C -0.104 4.104 19 Cl -0.120 7.120 20 C -0.136 4.136 21 C 0.122 3.878 22 N -0.749 5.749 23 H 0.045 0.955 24 H 0.044 0.956 25 H 0.053 0.947 26 H 0.070 0.930 27 H 0.062 0.938 28 H 0.052 0.948 29 H 0.098 0.902 30 H 0.270 0.730 31 H 0.123 0.877 32 H 0.109 0.891 33 H 0.110 0.890 34 H 0.389 0.611 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.096 0.359 -1.534 7.269 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.201 4.201 2 C -0.168 4.168 3 C 0.025 3.975 4 H 0.096 0.904 5 C 0.011 3.989 6 N -0.132 5.132 7 C -0.425 4.425 8 H 0.110 0.890 9 C -0.177 4.177 10 N -0.513 5.513 11 Si 0.749 3.251 12 H -0.198 1.198 13 H -0.209 1.209 14 H -0.199 1.199 15 C 0.052 3.948 16 C -0.206 4.206 17 C -0.117 4.117 18 C -0.135 4.135 19 Cl -0.092 7.092 20 C -0.162 4.162 21 C 0.018 3.982 22 N -0.384 5.384 23 H 0.064 0.936 24 H 0.064 0.936 25 H 0.072 0.928 26 H 0.088 0.912 27 H 0.081 0.919 28 H 0.070 0.930 29 H 0.116 0.884 30 H 0.081 0.919 31 H 0.141 0.859 32 H 0.127 0.873 33 H 0.128 0.872 34 H 0.222 0.778 Dipole moment (debyes) X Y Z Total from point charges -6.834 0.242 -0.972 6.907 hybrid contribution 0.314 -0.312 0.115 0.457 sum -6.519 -0.069 -0.857 6.576 Atomic orbital electron populations 1.21699 0.96599 1.00711 1.01062 1.21850 0.94939 0.97325 1.02708 1.21600 0.96962 0.92672 0.86224 0.90433 1.21816 0.88604 0.97985 0.90446 1.42436 1.32449 1.37592 1.00718 1.19468 1.07850 1.06356 1.08811 0.89003 1.25326 0.97387 0.97634 0.97314 1.69999 1.34533 1.25672 1.21081 0.86037 0.79551 0.81233 0.78245 1.19784 1.20883 1.19868 1.17743 0.91520 0.98034 0.87462 1.20199 1.01063 1.09521 0.89852 1.20360 0.94199 1.00072 0.97109 1.19803 0.97985 1.12000 0.83697 1.98249 1.86279 1.93498 1.31202 1.19810 0.99878 1.06995 0.89468 1.16975 0.91218 1.03976 0.86027 1.44266 1.40527 1.48423 1.05143 0.93575 0.93643 0.92752 0.91166 0.91939 0.92950 0.88427 0.91938 0.85892 0.87313 0.87228 0.77759 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.00 9.80 37.16 0.36 -1.64 16 2 C -0.13 -2.19 5.31 -26.73 -0.14 -2.34 16 3 C 0.13 2.30 3.29 -67.36 -0.22 2.08 16 4 H 0.08 1.16 8.14 -51.93 -0.42 0.74 16 5 C 0.14 2.95 4.62 -3.46 -0.02 2.94 16 6 N -0.44 -10.43 2.45 -112.23 -0.28 -10.71 16 7 C -0.30 -7.35 8.71 -15.15 -0.13 -7.49 16 8 H 0.09 2.25 7.04 -52.49 -0.37 1.88 16 9 C 0.03 0.67 4.94 -17.45 -0.09 0.58 16 10 N -0.88 -22.28 11.13 55.49 0.62 -21.67 16 11 Si 0.92 19.26 29.59 -169.99 -5.03 14.23 16 12 H -0.27 -5.68 7.11 56.52 0.40 -5.28 16 13 H -0.28 -5.92 7.11 56.52 0.40 -5.52 16 14 H -0.27 -5.66 7.11 56.52 0.40 -5.26 16 15 C 0.17 3.79 5.90 -83.54 -0.49 3.30 16 16 C -0.18 -3.90 9.23 -39.39 -0.36 -4.26 16 17 C -0.10 -1.88 9.81 -39.52 -0.39 -2.27 16 18 C -0.10 -1.98 6.32 -39.44 -0.25 -2.22 16 19 Cl -0.12 -2.01 28.95 -51.86 -1.50 -3.51 16 20 C -0.14 -2.56 9.71 -39.40 -0.38 -2.94 16 21 C 0.12 2.43 6.20 -83.46 -0.52 1.91 16 22 N -0.75 -12.92 4.96 -51.35 -0.25 -13.17 16 23 H 0.05 0.61 8.14 -51.93 -0.42 0.18 16 24 H 0.04 0.56 8.14 -51.93 -0.42 0.14 16 25 H 0.05 0.78 7.76 -51.93 -0.40 0.37 16 26 H 0.07 1.41 7.18 -51.93 -0.37 1.03 16 27 H 0.06 1.05 8.14 -51.93 -0.42 0.63 16 28 H 0.05 1.23 8.14 -51.93 -0.42 0.80 16 29 H 0.10 2.24 6.35 -51.93 -0.33 1.91 16 30 H 0.27 6.59 8.32 -40.82 -0.34 6.25 16 31 H 0.12 2.70 6.81 -52.48 -0.36 2.34 16 32 H 0.11 1.91 8.06 -52.49 -0.42 1.49 16 33 H 0.11 1.84 8.06 -52.49 -0.42 1.42 16 34 H 0.39 5.70 8.90 -40.82 -0.36 5.34 16 LS Contribution 291.44 15.07 4.39 4.39 Total: -1.00 -25.33 291.44 -8.97 -34.30 By element: Atomic # 1 Polarization: 12.76 SS G_CDS: -4.29 Total: 8.47 kcal Atomic # 6 Polarization: -9.72 SS G_CDS: -2.63 Total: -12.34 kcal Atomic # 7 Polarization: -45.63 SS G_CDS: 0.09 Total: -45.54 kcal Atomic # 14 Polarization: 19.26 SS G_CDS: -5.03 Total: 14.23 kcal Atomic # 17 Polarization: -2.01 SS G_CDS: -1.50 Total: -3.51 kcal Total LS contribution 4.39 Total: 4.39 kcal Total: -25.33 -8.97 -34.30 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000076929438.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 63.485 kcal (2) G-P(sol) polarization free energy of solvation -25.333 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 38.152 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.969 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.302 kcal (6) G-S(sol) free energy of system = (1) + (5) 29.182 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds