Wall clock time and date at job start Mon Mar 30 2020 06:29:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 N 1.46900 * 109.46833 * 2 1 4 4 C 1.46906 * 111.00299 * 75.89183 * 3 2 1 5 5 C 1.50695 * 109.47549 * 195.64083 * 4 3 2 6 6 H 1.08006 * 120.00057 * 355.32161 * 5 4 3 7 7 C 1.37872 * 120.00297 * 175.31679 * 5 4 3 8 8 N 1.31515 * 120.00157 * 359.97438 * 7 5 4 9 9 Si 1.86799 * 120.00203 * 180.02562 * 7 5 4 10 10 H 1.48496 * 109.47413 * 59.99850 * 9 7 5 11 11 H 1.48503 * 109.47366 * 180.02562 * 9 7 5 12 12 H 1.48502 * 109.47034 * 299.99852 * 9 7 5 13 13 C 1.39349 * 111.00089 * 199.84279 * 3 2 1 14 14 C 1.39186 * 119.90825 * 296.04807 * 13 3 2 15 15 C 1.37620 * 120.16350 * 179.97438 * 14 13 3 16 16 C 1.39851 * 119.97566 * 0.02562 * 15 14 13 17 17 C 1.43201 * 120.08756 * 179.97438 * 16 15 14 18 18 N 7.38963 * 158.46958 * 308.35616 * 2 1 3 19 19 C 1.40034 * 119.82247 * 0.02562 * 16 15 14 20 20 F 1.35102 * 120.08053 * 180.02562 * 19 16 15 21 21 C 1.38122 * 119.83971 * 359.74062 * 19 16 15 22 22 F 1.35101 * 119.99412 * 180.25383 * 21 19 16 23 23 H 1.08999 * 109.47118 * 302.16852 * 1 2 3 24 24 H 1.08996 * 109.47384 * 62.16667 * 1 2 3 25 25 H 1.09000 * 109.47013 * 182.17753 * 1 2 3 26 26 H 1.08993 * 109.47193 * 240.00608 * 2 1 3 27 27 H 1.09001 * 109.47523 * 119.99835 * 2 1 3 28 28 H 1.09004 * 109.46688 * 315.64435 * 4 3 2 29 29 H 1.08996 * 109.47320 * 75.63557 * 4 3 2 30 30 H 0.96992 * 120.00254 * 179.97438 * 8 7 5 31 31 H 1.08000 * 119.92249 * 359.97438 * 14 13 3 32 32 H 1.08003 * 120.01169 * 180.02562 * 15 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0196 1.3850 0.0000 4 6 1.8799 1.9929 1.3301 5 6 2.0202 3.4889 1.2161 6 1 2.2705 3.9370 0.2657 7 6 1.8290 4.2858 2.3248 8 7 1.5237 3.7404 3.4819 9 14 2.0023 6.1403 2.1832 10 1 1.0188 6.6556 1.1972 11 1 1.7497 6.7637 3.5072 12 1 3.3770 6.4761 1.7329 13 6 3.3397 1.4480 -0.4416 14 6 4.3477 0.8309 0.2936 15 6 5.6532 0.8894 -0.1379 16 6 5.9693 1.5707 -1.3176 17 6 7.3270 1.6335 -1.7686 18 7 8.4040 1.6829 -2.1266 19 6 4.9547 2.1922 -2.0561 20 9 5.2541 2.8513 -3.1968 21 6 3.6463 2.1247 -1.6187 22 9 2.6644 2.7188 -2.3314 23 1 -0.3633 0.5471 0.8699 24 1 -0.3634 0.4798 -0.9087 25 1 -0.3633 -1.0269 0.0390 26 1 1.8933 -0.5137 -0.8900 27 1 1.8934 -0.5138 0.8900 28 1 0.8992 1.7500 1.7393 29 1 2.6553 1.6045 1.9903 30 1 1.3895 4.3010 4.2620 31 1 4.1047 0.3049 1.2050 32 1 6.4333 0.4093 0.4343 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000233446840.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:29:34 Heat of formation + Delta-G solvation = -25.393404 kcal Electronic energy + Delta-G solvation = -19853.389333 eV Core-core repulsion = 16450.549470 eV Total energy + Delta-G solvation = -3402.839863 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 266.093 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -49.28846 -48.20656 -39.62168 -37.24057 -35.86161 -32.79284 -31.28292 -30.38967 -29.19094 -26.83167 -23.82972 -22.80211 -22.73918 -20.56138 -19.32111 -17.56089 -17.11779 -16.37466 -16.18316 -16.10449 -15.22835 -15.04831 -14.57960 -14.12296 -14.08857 -14.02915 -13.73385 -13.40727 -13.27772 -12.80082 -12.37121 -12.10351 -11.96805 -11.89001 -11.48278 -11.42239 -11.31498 -10.95474 -10.78355 -10.48899 -9.99725 -9.45576 -8.72192 -8.56803 -8.54407 -7.82599 -6.16195 -4.17821 0.54653 1.06566 2.54434 2.81331 3.29186 3.32864 3.37155 3.52504 3.65716 3.85611 4.27572 4.43863 4.58519 4.85113 4.95727 5.21232 5.30391 5.45084 5.54437 5.64427 5.85154 5.89632 6.04517 6.10035 6.24977 6.33947 6.59226 6.68206 6.96573 7.00158 7.38246 7.55652 7.88109 7.92200 8.24172 8.87911 9.47268 10.94065 Molecular weight = 266.09amu Principal moments of inertia in cm(-1) A = 0.015602 B = 0.007375 C = 0.006182 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1794.224926 B = 3795.756452 C = 4528.203964 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C 0.058 3.942 3 N -0.513 5.513 4 C 0.196 3.804 5 C -0.513 4.513 6 H 0.062 0.938 7 C 0.062 3.938 8 N -0.896 5.896 9 Si 0.895 3.105 10 H -0.274 1.274 11 H -0.287 1.287 12 H -0.276 1.276 13 C 0.167 3.833 14 C -0.134 4.134 15 C -0.042 4.042 16 C -0.062 4.062 17 C 0.265 3.735 18 N -0.415 5.415 19 C 0.112 3.888 20 F -0.122 7.122 21 C 0.088 3.912 22 F -0.110 7.110 23 H 0.064 0.936 24 H 0.060 0.940 25 H 0.052 0.948 26 H 0.062 0.938 27 H 0.038 0.962 28 H 0.048 0.952 29 H 0.002 0.998 30 H 0.264 0.736 31 H 0.147 0.853 32 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.981 -8.438 -5.836 10.684 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.202 4.202 2 C -0.068 4.068 3 N -0.235 5.235 4 C 0.073 3.927 5 C -0.551 4.551 6 H 0.080 0.920 7 C -0.140 4.140 8 N -0.535 5.535 9 Si 0.723 3.277 10 H -0.200 1.200 11 H -0.212 1.212 12 H -0.201 1.201 13 C 0.070 3.930 14 C -0.155 4.155 15 C -0.063 4.063 16 C -0.066 4.066 17 C -0.050 4.050 18 N -0.090 5.090 19 C 0.089 3.911 20 F -0.100 7.100 21 C 0.066 3.934 22 F -0.088 7.088 23 H 0.083 0.917 24 H 0.079 0.921 25 H 0.070 0.930 26 H 0.081 0.919 27 H 0.056 0.944 28 H 0.066 0.934 29 H 0.020 0.980 30 H 0.074 0.926 31 H 0.165 0.835 32 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges 4.241 -7.997 -6.578 11.189 hybrid contribution -0.047 0.996 0.451 1.094 sum 4.194 -7.001 -6.126 10.205 Atomic orbital electron populations 1.21738 0.94529 1.00585 1.03308 1.22067 0.96746 0.87945 1.00030 1.59766 1.13672 1.17228 1.32857 1.20021 0.97792 0.94738 0.80109 1.21062 1.47742 0.90692 0.95653 0.91971 1.24906 0.94980 0.99009 0.95125 1.69912 1.47730 1.35807 1.00034 0.86586 0.78912 0.84974 0.77243 1.19967 1.21210 1.20116 1.18918 0.91818 0.91744 0.90530 1.21677 0.91974 1.01035 1.00793 1.20902 0.97173 0.95651 0.92577 1.15669 0.84889 1.07353 0.98719 1.25210 0.92391 0.93746 0.93656 1.81213 1.11493 1.08524 1.07813 1.17392 0.91510 0.97246 0.84963 1.91538 1.93661 1.78199 1.46631 1.17281 0.83247 0.99816 0.93069 1.91550 1.59961 1.81019 1.76246 0.91687 0.92123 0.92950 0.91899 0.94417 0.93414 0.98027 0.92641 0.83544 0.83739 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.06 10.05 37.16 0.37 -1.69 16 2 C 0.06 0.87 5.25 -3.83 -0.02 0.85 16 3 N -0.51 -9.67 4.18 -172.41 -0.72 -10.39 16 4 C 0.20 4.46 4.45 -4.98 -0.02 4.44 16 5 C -0.51 -13.43 8.86 -34.44 -0.31 -13.74 16 6 H 0.06 1.67 7.73 -52.48 -0.41 1.26 16 7 C 0.06 1.66 5.46 -17.82 -0.10 1.56 16 8 N -0.90 -24.85 13.29 55.43 0.74 -24.11 16 9 Si 0.90 21.03 29.54 -169.99 -5.02 16.01 16 10 H -0.27 -6.43 7.11 56.52 0.40 -6.03 16 11 H -0.29 -6.64 7.11 56.52 0.40 -6.24 16 12 H -0.28 -6.44 7.11 56.52 0.40 -6.04 16 13 C 0.17 2.86 4.02 -83.74 -0.34 2.52 16 14 C -0.13 -1.88 8.56 -39.45 -0.34 -2.22 16 15 C -0.04 -0.50 9.74 -39.20 -0.38 -0.88 16 16 C -0.06 -0.84 5.75 -106.69 -0.61 -1.45 16 17 C 0.27 3.79 14.97 -22.47 -0.34 3.45 16 18 N -0.42 -6.54 18.54 41.84 0.78 -5.76 16 19 C 0.11 1.74 7.28 -38.95 -0.28 1.46 16 20 F -0.12 -1.95 16.72 2.25 0.04 -1.92 16 21 C 0.09 1.51 7.30 -39.27 -0.29 1.22 16 22 F -0.11 -2.08 16.98 2.25 0.04 -2.04 16 23 H 0.06 1.05 6.71 -51.93 -0.35 0.71 16 24 H 0.06 0.89 8.14 -51.93 -0.42 0.46 16 25 H 0.05 0.60 8.14 -51.93 -0.42 0.18 16 26 H 0.06 0.82 7.91 -51.93 -0.41 0.41 16 27 H 0.04 0.53 7.92 -51.93 -0.41 0.12 16 28 H 0.05 1.17 6.52 -51.93 -0.34 0.83 16 29 H 0.00 0.05 6.76 -51.93 -0.35 -0.30 16 30 H 0.26 7.00 8.31 -40.82 -0.34 6.67 16 31 H 0.15 1.89 7.33 -52.49 -0.38 1.50 16 32 H 0.14 1.27 8.06 -52.48 -0.42 0.85 16 LS Contribution 295.80 15.07 4.46 4.46 Total: -1.00 -28.46 295.80 -5.40 -33.85 By element: Atomic # 1 Polarization: -2.58 SS G_CDS: -3.05 Total: -5.63 kcal Atomic # 6 Polarization: -1.82 SS G_CDS: -2.65 Total: -4.47 kcal Atomic # 7 Polarization: -41.05 SS G_CDS: 0.79 Total: -40.26 kcal Atomic # 9 Polarization: -4.04 SS G_CDS: 0.08 Total: -3.96 kcal Atomic # 14 Polarization: 21.03 SS G_CDS: -5.02 Total: 16.01 kcal Total LS contribution 4.46 Total: 4.46 kcal Total: -28.46 -5.40 -33.85 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000233446840.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 8.461 kcal (2) G-P(sol) polarization free energy of solvation -28.457 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -19.995 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.398 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.855 kcal (6) G-S(sol) free energy of system = (1) + (5) -25.393 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds