Wall clock time and date at job start Mon Mar 30 2020 06:29:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 H 1.09004 * 109.46741 * 2 1 4 4 C 1.52997 * 109.47236 * 239.99889 * 2 1 3 5 5 C 1.50701 * 109.47212 * 64.99766 * 4 2 1 6 6 H 1.07998 * 120.00129 * 0.02562 * 5 4 2 7 7 C 1.37880 * 119.99861 * 179.97438 * 5 4 2 8 8 N 1.31512 * 119.99594 * 180.02562 * 7 5 4 9 9 Si 1.86797 * 119.99875 * 0.02562 * 7 5 4 10 10 H 1.48504 * 109.47061 * 90.00257 * 9 7 5 11 11 H 1.48497 * 109.46906 * 209.99430 * 9 7 5 12 12 H 1.48498 * 109.47403 * 329.99876 * 9 7 5 13 13 N 1.46500 * 109.46959 * 119.99432 * 2 1 3 14 14 C 1.36077 * 126.35223 * 60.03174 * 13 2 1 15 15 N 1.30091 * 110.09068 * 179.97438 * 14 13 2 16 16 C 1.35826 * 109.65544 * 359.97438 * 15 14 13 17 17 C 1.39788 * 133.50260 * 180.02562 * 16 15 14 18 18 C 1.37735 * 119.78209 * 179.97438 * 17 16 15 19 19 F 1.35101 * 119.77318 * 179.97438 * 18 17 16 20 20 C 1.39183 * 120.45445 * 359.97438 * 18 17 16 21 21 F 1.35099 * 119.80335 * 180.02562 * 20 18 17 22 22 C 1.37981 * 120.38666 * 0.04215 * 20 18 17 23 23 C 1.38161 * 126.35516 * 239.71733 * 13 2 1 24 24 H 1.09004 * 109.46741 * 180.02562 * 1 2 3 25 25 H 1.09000 * 109.47403 * 300.00135 * 1 2 3 26 26 H 1.09001 * 109.46917 * 60.00677 * 1 2 3 27 27 H 1.09002 * 109.47153 * 304.99767 * 4 2 1 28 28 H 1.09001 * 109.46832 * 184.99958 * 4 2 1 29 29 H 0.97002 * 119.99739 * 180.02562 * 8 7 5 30 30 H 1.07997 * 124.95376 * 359.95885 * 14 13 2 31 31 H 1.08000 * 120.11010 * 359.97438 * 17 16 15 32 32 H 1.08001 * 120.08119 * 179.97438 * 22 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 6 2.0401 -0.7213 -1.2492 5 6 1.6414 0.0570 -2.4766 6 1 1.0807 0.9745 -2.3757 7 6 1.9933 -0.4018 -3.7283 8 7 1.6458 0.2776 -4.7993 9 14 2.9637 -1.9884 -3.9026 10 1 2.0246 -3.1328 -4.0199 11 1 3.8126 -1.9183 -5.1190 12 1 3.8253 -2.1756 -2.7077 13 7 2.0183 -0.6905 1.1962 14 6 1.7710 -1.9842 1.5383 15 7 2.3593 -2.2693 2.6630 16 6 3.0254 -1.1773 3.1199 17 6 3.8070 -0.9310 4.2524 18 6 4.3639 0.3145 4.4416 19 9 5.1188 0.5525 5.5364 20 6 4.1543 1.3295 3.5126 21 9 4.7073 2.5460 3.7110 22 6 3.3848 1.1005 2.3904 23 6 2.8203 -0.1508 2.1834 24 1 -0.3633 -1.0277 0.0005 25 1 -0.3634 0.5138 0.8900 26 1 -0.3633 0.5137 -0.8901 27 1 1.6055 -1.7198 -1.2951 28 1 3.1264 -0.7994 -1.2055 29 1 1.8931 -0.0454 -5.6799 30 1 1.1734 -2.6735 0.9604 31 1 3.9736 -1.7146 4.9766 32 1 3.2250 1.8918 1.6729 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000695810198.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:29:03 Heat of formation + Delta-G solvation = -25.122134 kcal Electronic energy + Delta-G solvation = -19523.507936 eV Core-core repulsion = 16120.679836 eV Total energy + Delta-G solvation = -3402.828100 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 266.093 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -49.40721 -48.48529 -42.15892 -37.15162 -35.66830 -32.97404 -31.57908 -29.58436 -28.87583 -27.83093 -24.13003 -23.67965 -22.28210 -21.88570 -19.61797 -18.21225 -17.58643 -17.26010 -16.92286 -16.33438 -15.56766 -15.20745 -15.13092 -14.91959 -14.47807 -14.20707 -14.02132 -13.75112 -13.40129 -13.19111 -12.88494 -12.37779 -11.99403 -11.65549 -11.44654 -11.19774 -11.11803 -10.79140 -10.52626 -10.11558 -9.97376 -9.96076 -9.52963 -8.79481 -8.25646 -8.15915 -6.29651 -4.32176 0.64139 1.11795 2.69311 2.74583 3.13630 3.23573 3.25325 3.53503 3.73837 4.12209 4.22643 4.27623 4.65508 4.89006 5.01937 5.08531 5.11790 5.35245 5.43664 5.45392 5.64964 5.73646 5.75351 5.96711 6.16982 6.31074 6.38582 6.52087 6.66567 6.76127 6.90215 7.17995 7.46180 7.84033 8.19522 8.69974 9.29913 10.82342 Molecular weight = 266.09amu Principal moments of inertia in cm(-1) A = 0.025669 B = 0.005070 C = 0.004838 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1090.542223 B = 5521.623087 C = 5786.588921 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C 0.139 3.861 3 H 0.097 0.903 4 C -0.017 4.017 5 C -0.528 4.528 6 H 0.079 0.921 7 C 0.076 3.924 8 N -0.892 5.892 9 Si 0.876 3.124 10 H -0.274 1.274 11 H -0.284 1.284 12 H -0.266 1.266 13 N -0.470 5.470 14 C 0.283 3.717 15 N -0.504 5.504 16 C 0.060 3.940 17 C -0.074 4.074 18 C 0.056 3.944 19 F -0.131 7.131 20 C 0.076 3.924 21 F -0.128 7.128 22 C -0.107 4.107 23 C 0.062 3.938 24 H 0.058 0.942 25 H 0.046 0.954 26 H 0.094 0.906 27 H 0.022 0.978 28 H 0.024 0.976 29 H 0.267 0.733 30 H 0.216 0.784 31 H 0.149 0.851 32 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.136 -1.315 14.177 14.283 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C 0.039 3.961 3 H 0.115 0.885 4 C -0.055 4.055 5 C -0.566 4.566 6 H 0.097 0.903 7 C -0.127 4.127 8 N -0.529 5.529 9 Si 0.703 3.297 10 H -0.199 1.199 11 H -0.210 1.210 12 H -0.191 1.191 13 N -0.156 5.156 14 C -0.003 4.003 15 N -0.224 5.224 16 C -0.060 4.060 17 C -0.095 4.095 18 C 0.033 3.967 19 F -0.110 7.110 20 C 0.054 3.946 21 F -0.107 7.107 22 C -0.129 4.129 23 C -0.050 4.050 24 H 0.077 0.923 25 H 0.065 0.935 26 H 0.112 0.888 27 H 0.040 0.960 28 H 0.043 0.957 29 H 0.077 0.923 30 H 0.232 0.768 31 H 0.167 0.833 32 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges 1.101 -1.949 14.282 14.457 hybrid contribution 0.744 0.189 -0.639 0.999 sum 1.846 -1.760 13.643 13.880 Atomic orbital electron populations 1.22091 0.93142 1.02722 1.02798 1.21828 0.95465 0.97166 0.81638 0.88496 1.19969 0.97032 0.96428 0.92089 1.20814 1.37216 1.10128 0.88465 0.90325 1.24935 0.95111 0.96955 0.95744 1.69875 1.45837 1.38983 0.98250 0.86842 0.80737 0.84013 0.78145 1.19941 1.21023 1.19090 1.46256 1.38772 1.11252 1.19312 1.25382 0.97531 0.84575 0.92789 1.70520 1.14473 1.26360 1.11011 1.18704 1.01220 0.90562 0.95528 1.19853 0.97188 0.95173 0.97272 1.17034 0.99356 0.93940 0.86341 1.91507 1.73729 1.94866 1.50863 1.16972 1.00424 0.80985 0.96179 1.91518 1.83552 1.40628 1.94952 1.19660 0.99421 0.96100 0.97713 1.18529 0.98862 0.95388 0.92225 0.92313 0.93529 0.88758 0.95995 0.95728 0.92289 0.76811 0.83287 0.83518 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.20 9.06 37.16 0.34 -1.86 16 2 C 0.14 2.30 3.01 -67.93 -0.20 2.09 16 3 H 0.10 1.60 7.61 -51.93 -0.40 1.21 16 4 C -0.02 -0.35 3.52 -27.88 -0.10 -0.45 16 5 C -0.53 -13.07 8.96 -34.44 -0.31 -13.37 16 6 H 0.08 2.06 7.30 -52.49 -0.38 1.68 16 7 C 0.08 2.00 5.47 -17.82 -0.10 1.91 16 8 N -0.89 -25.30 13.96 55.43 0.77 -24.53 16 9 Si 0.88 19.99 27.47 -169.99 -4.67 15.32 16 10 H -0.27 -6.10 7.11 56.52 0.40 -5.70 16 11 H -0.28 -6.56 7.11 56.52 0.40 -6.16 16 12 H -0.27 -5.95 6.54 56.52 0.37 -5.58 16 13 N -0.47 -7.30 2.67 -108.68 -0.29 -7.59 16 14 C 0.28 4.11 11.60 -89.76 -1.04 3.07 16 15 N -0.50 -7.95 11.27 -12.04 -0.14 -8.08 16 16 C 0.06 0.93 7.23 -84.68 -0.61 0.32 16 17 C -0.07 -1.00 10.07 -39.19 -0.39 -1.40 16 18 C 0.06 0.76 7.29 -39.41 -0.29 0.48 16 19 F -0.13 -1.79 17.16 2.25 0.04 -1.75 16 20 C 0.08 1.07 7.30 -39.32 -0.29 0.78 16 21 F -0.13 -1.82 17.17 2.25 0.04 -1.78 16 22 C -0.11 -1.52 9.85 -39.46 -0.39 -1.91 16 23 C 0.06 0.96 6.87 -83.96 -0.58 0.39 16 24 H 0.06 0.79 7.95 -51.93 -0.41 0.38 16 25 H 0.05 0.61 8.14 -51.93 -0.42 0.19 16 26 H 0.09 1.53 6.95 -51.93 -0.36 1.17 16 27 H 0.02 0.43 7.51 -51.93 -0.39 0.04 16 28 H 0.02 0.53 7.20 -51.93 -0.37 0.16 16 29 H 0.27 7.14 8.31 -40.82 -0.34 6.80 16 30 H 0.22 2.42 8.06 -52.49 -0.42 2.00 16 31 H 0.15 1.69 8.06 -52.49 -0.42 1.27 16 32 H 0.15 1.88 7.74 -52.49 -0.41 1.48 16 LS Contribution 285.49 15.07 4.30 4.30 Total: -1.00 -28.08 285.49 -7.06 -35.14 By element: Atomic # 1 Polarization: 2.09 SS G_CDS: -3.16 Total: -1.07 kcal Atomic # 6 Polarization: -5.99 SS G_CDS: -3.96 Total: -9.95 kcal Atomic # 7 Polarization: -40.56 SS G_CDS: 0.35 Total: -40.21 kcal Atomic # 9 Polarization: -3.61 SS G_CDS: 0.08 Total: -3.53 kcal Atomic # 14 Polarization: 19.99 SS G_CDS: -4.67 Total: 15.32 kcal Total LS contribution 4.30 Total: 4.30 kcal Total: -28.08 -7.06 -35.14 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000695810198.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 10.019 kcal (2) G-P(sol) polarization free energy of solvation -28.083 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -18.064 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.058 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.141 kcal (6) G-S(sol) free energy of system = (1) + (5) -25.122 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.34 seconds