Wall clock time and date at job start Mon Mar 30 2020 07:25:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35900 * 117.00316 * 2 1 4 4 C 1.38835 * 119.96017 * 0.02562 * 3 2 1 5 5 C 1.38479 * 120.23112 * 179.97438 * 4 3 2 6 6 F 1.35107 * 119.91287 * 179.97438 * 5 4 3 7 7 C 1.38215 * 120.16907 * 0.02562 * 5 4 3 8 8 C 1.39658 * 119.92363 * 0.02562 * 7 5 4 9 9 C 1.47496 * 120.11734 * 180.02562 * 8 7 5 10 10 N 1.29741 * 120.00001 * 359.97438 * 9 8 7 11 11 N 1.40105 * 120.00266 * 180.02562 * 10 9 8 12 12 C 1.46495 * 120.00090 * 180.02562 * 11 10 9 13 13 H 1.08998 * 109.47579 * 330.00463 * 12 11 10 14 14 C 1.53005 * 109.46840 * 90.00141 * 12 11 10 15 15 C 1.50697 * 109.47253 * 209.99886 * 12 11 10 16 16 H 1.08004 * 119.99710 * 0.02562 * 15 12 11 17 17 C 1.37877 * 120.00476 * 180.02562 * 15 12 11 18 18 N 1.31515 * 119.99693 * 359.97438 * 17 15 12 19 19 Si 1.86795 * 120.00273 * 180.02562 * 17 15 12 20 20 H 1.48500 * 109.47567 * 59.99419 * 19 17 15 21 21 H 1.48499 * 109.47121 * 179.97438 * 19 17 15 22 22 H 1.48496 * 109.47017 * 299.99480 * 19 17 15 23 23 C 1.38435 * 119.96930 * 180.02562 * 3 2 1 24 24 H 1.09001 * 109.47361 * 300.00104 * 1 2 3 25 25 H 1.09005 * 109.47154 * 60.00256 * 1 2 3 26 26 H 1.08996 * 109.47457 * 179.97438 * 1 2 3 27 27 H 1.07999 * 119.88583 * 359.71590 * 4 3 2 28 28 H 1.07995 * 120.04094 * 180.02562 * 7 5 4 29 29 H 1.07998 * 120.00034 * 179.97438 * 9 8 7 30 30 H 0.96996 * 119.99734 * 359.97438 * 11 10 9 31 31 H 1.08996 * 109.47603 * 60.00190 * 14 12 11 32 32 H 1.09004 * 109.46589 * 180.02562 * 14 12 11 33 33 H 1.08995 * 109.46912 * 299.99579 * 14 12 11 34 34 H 0.96998 * 120.00135 * 179.97438 * 18 17 15 35 35 H 1.08002 * 120.07565 * 359.97438 * 23 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 1.2891 2.3747 0.0005 5 6 1.9121 3.6115 0.0011 6 9 1.1692 4.7400 0.0011 7 6 3.2917 3.6944 0.0005 8 6 4.0597 2.5279 -0.0011 9 6 5.5323 2.6113 -0.0011 10 7 6.1164 3.7698 -0.0001 11 7 7.5152 3.8492 -0.0006 12 6 8.1747 5.1573 0.0011 13 1 7.5433 5.8832 -0.5112 14 6 8.4050 5.6104 1.4443 15 6 9.4992 5.0530 -0.7101 16 1 9.8177 4.1070 -1.1225 17 6 10.3045 6.1652 -0.8343 18 7 9.9165 7.3173 -0.3325 19 14 11.9460 6.0361 -1.7164 20 1 11.7220 5.5971 -3.1173 21 1 12.6146 7.3621 -1.7146 22 1 12.8061 5.0466 -1.0191 23 6 3.4285 1.2825 -0.0005 24 1 -0.3634 0.5138 0.8900 25 1 -0.3634 0.5138 -0.8900 26 1 -0.3634 -1.0276 -0.0005 27 1 0.2108 2.3154 -0.0037 28 1 3.7753 4.6600 0.0014 29 1 6.1243 1.7081 -0.0019 30 1 8.0469 3.0379 -0.0014 31 1 9.0363 4.8846 1.9567 32 1 8.8953 6.5839 1.4455 33 1 7.4470 5.6858 1.9586 34 1 10.4831 8.0997 -0.4196 35 1 4.0174 0.3771 -0.0005 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000834965525.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:25:08 Heat of formation + Delta-G solvation = -19.371338 kcal Electronic energy + Delta-G solvation = -18832.899325 eV Core-core repulsion = 15553.780904 eV Total energy + Delta-G solvation = -3279.118421 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 266.117 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -48.84575 -40.09274 -37.69427 -36.26677 -34.06206 -31.84388 -30.54445 -29.97412 -27.58712 -27.07967 -25.28338 -23.35345 -22.53722 -20.62434 -20.17757 -18.14932 -17.27630 -16.53761 -16.18324 -16.07869 -16.04172 -15.36390 -15.10610 -15.08510 -14.57233 -14.12631 -13.32111 -13.01754 -12.88893 -12.54979 -12.38464 -12.26975 -11.64967 -11.49017 -11.41875 -11.18284 -11.05053 -10.85159 -10.54340 -10.28710 -10.25441 -9.68661 -9.13525 -8.91040 -8.54340 -8.29208 -6.95734 -6.18347 -4.27338 0.91864 1.31665 2.82558 3.00263 3.23181 3.28187 3.29449 3.69827 3.88085 4.22320 4.32417 4.71581 4.83159 4.90974 5.00614 5.07208 5.14250 5.23059 5.34596 5.48449 5.75620 6.04771 6.05482 6.25557 6.39914 6.63771 6.72352 6.89527 6.93912 7.07990 7.22296 7.51244 7.70472 7.78395 8.06226 8.21216 8.78679 9.17316 9.39623 10.87580 Molecular weight = 266.12amu Principal moments of inertia in cm(-1) A = 0.035510 B = 0.003295 C = 0.003125 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 788.324375 B = 8496.944579 C = 8958.351800 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.313 6.313 3 C 0.155 3.845 4 C -0.258 4.258 5 C 0.139 3.861 6 F -0.139 7.139 7 C -0.173 4.173 8 C 0.066 3.934 9 C -0.025 4.025 10 N -0.180 5.180 11 N -0.613 5.613 12 C 0.295 3.705 13 H 0.044 0.956 14 C -0.151 4.151 15 C -0.534 4.534 16 H 0.060 0.940 17 C 0.068 3.932 18 N -0.885 5.885 19 Si 0.904 3.096 20 H -0.276 1.276 21 H -0.285 1.285 22 H -0.276 1.276 23 C -0.158 4.158 24 H 0.056 0.944 25 H 0.056 0.944 26 H 0.099 0.901 27 H 0.135 0.865 28 H 0.147 0.853 29 H 0.109 0.891 30 H 0.371 0.629 31 H 0.027 0.973 32 H 0.091 0.909 33 H 0.013 0.987 34 H 0.266 0.734 35 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -16.033 -11.791 1.307 19.945 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.227 6.227 3 C 0.109 3.891 4 C -0.279 4.279 5 C 0.120 3.880 6 F -0.118 7.118 7 C -0.194 4.194 8 C 0.063 3.937 9 C -0.232 4.232 10 N 0.006 4.994 11 N -0.349 5.349 12 C 0.193 3.807 13 H 0.062 0.938 14 C -0.210 4.210 15 C -0.573 4.573 16 H 0.078 0.922 17 C -0.136 4.136 18 N -0.523 5.523 19 Si 0.731 3.269 20 H -0.201 1.201 21 H -0.210 1.210 22 H -0.201 1.201 23 C -0.180 4.180 24 H 0.075 0.925 25 H 0.075 0.925 26 H 0.118 0.882 27 H 0.153 0.847 28 H 0.165 0.835 29 H 0.127 0.873 30 H 0.208 0.792 31 H 0.046 0.954 32 H 0.110 0.890 33 H 0.032 0.968 34 H 0.076 0.924 35 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -15.911 -10.541 1.325 19.132 hybrid contribution 0.975 -0.812 -0.427 1.339 sum -14.936 -11.353 0.898 18.783 Atomic orbital electron populations 1.23071 0.78387 1.03904 1.01530 1.86087 1.21395 1.26473 1.88711 1.18418 0.91714 0.83516 0.95406 1.21044 1.00702 0.91227 1.14942 1.17245 0.88942 0.81476 1.00382 1.91498 1.76774 1.49741 1.93737 1.21292 0.91142 1.00771 1.06179 1.17903 0.91002 0.91118 0.93641 1.23293 0.92257 0.94051 1.13589 1.73906 0.97792 1.25483 1.02257 1.49198 0.96537 1.10115 1.79075 1.18616 0.90944 0.77968 0.93184 0.93826 1.22214 0.97970 1.03322 0.97539 1.21178 1.02735 0.96362 1.37026 0.92157 1.24858 0.98394 0.94972 0.95342 1.69875 1.37798 1.00106 1.44488 0.86461 0.82962 0.77346 0.80082 1.20130 1.21034 1.20132 1.20362 0.91063 0.97952 1.08591 0.92542 0.92549 0.88213 0.84682 0.83546 0.87319 0.79233 0.95408 0.89015 0.96755 0.92406 0.84418 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.18 9.81 101.05 0.99 1.17 16 2 O -0.31 -3.36 10.49 -19.43 -0.20 -3.56 16 3 C 0.15 1.88 6.68 -39.29 -0.26 1.61 16 4 C -0.26 -3.09 9.01 -39.27 -0.35 -3.44 16 5 C 0.14 1.94 7.29 -39.50 -0.29 1.65 16 6 F -0.14 -1.99 17.26 2.25 0.04 -1.95 16 7 C -0.17 -2.64 9.55 -39.06 -0.37 -3.01 16 8 C 0.07 0.98 5.87 -105.08 -0.62 0.36 16 9 C -0.03 -0.42 10.75 -14.66 -0.16 -0.57 16 10 N -0.18 -3.58 10.61 32.16 0.34 -3.24 16 11 N -0.61 -13.21 6.10 -5.88 -0.04 -13.25 16 12 C 0.29 7.38 3.23 -69.08 -0.22 7.16 16 13 H 0.04 1.22 8.14 -51.93 -0.42 0.79 16 14 C -0.15 -3.67 9.29 37.16 0.35 -3.32 16 15 C -0.53 -14.12 8.74 -34.44 -0.30 -14.42 16 16 H 0.06 1.55 7.79 -52.48 -0.41 1.14 16 17 C 0.07 1.80 5.30 -17.82 -0.09 1.71 16 18 N -0.89 -24.41 11.32 55.43 0.63 -23.79 16 19 Si 0.90 20.53 29.54 -169.99 -5.02 15.51 16 20 H -0.28 -6.24 7.11 56.52 0.40 -5.84 16 21 H -0.28 -6.42 7.11 56.52 0.40 -6.02 16 22 H -0.28 -6.17 7.11 56.52 0.40 -5.77 16 23 C -0.16 -2.02 9.72 -38.99 -0.38 -2.40 16 24 H 0.06 0.34 7.66 -51.93 -0.40 -0.06 16 25 H 0.06 0.34 7.65 -51.93 -0.40 -0.06 16 26 H 0.10 0.45 8.14 -51.93 -0.42 0.03 16 27 H 0.14 1.29 6.28 -52.49 -0.33 0.96 16 28 H 0.15 2.42 7.55 -52.49 -0.40 2.02 16 29 H 0.11 1.55 8.02 -52.49 -0.42 1.12 16 30 H 0.37 7.33 8.58 -182.60 -1.57 5.77 16 31 H 0.03 0.64 8.14 -51.93 -0.42 0.21 16 32 H 0.09 2.40 6.07 -51.93 -0.32 2.08 16 33 H 0.01 0.31 8.14 -51.93 -0.42 -0.11 16 34 H 0.27 6.98 8.31 -40.82 -0.34 6.64 16 35 H 0.14 1.51 8.06 -52.49 -0.42 1.08 16 LS Contribution 310.41 15.07 4.68 4.68 Total: -1.00 -28.34 310.41 -6.77 -35.11 By element: Atomic # 1 Polarization: 9.47 SS G_CDS: -5.48 Total: 3.99 kcal Atomic # 6 Polarization: -11.79 SS G_CDS: -1.71 Total: -13.51 kcal Atomic # 7 Polarization: -41.21 SS G_CDS: 0.93 Total: -40.27 kcal Atomic # 8 Polarization: -3.36 SS G_CDS: -0.20 Total: -3.56 kcal Atomic # 9 Polarization: -1.99 SS G_CDS: 0.04 Total: -1.95 kcal Atomic # 14 Polarization: 20.53 SS G_CDS: -5.02 Total: 15.51 kcal Total LS contribution 4.68 Total: 4.68 kcal Total: -28.34 -6.77 -35.11 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000834965525.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 15.737 kcal (2) G-P(sol) polarization free energy of solvation -28.340 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -12.603 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.769 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.108 kcal (6) G-S(sol) free energy of system = (1) + (5) -19.371 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds