Wall clock time and date at job start Mon Mar 30 2020 06:32:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 H 1.08998 * 109.46758 * 2 1 4 4 C 1.50700 * 109.47194 * 119.99798 * 2 1 3 5 5 H 1.07999 * 119.99256 * 116.69007 * 4 2 1 6 6 C 1.37868 * 120.00303 * 296.69370 * 4 2 1 7 7 N 1.31520 * 120.00090 * 352.44338 * 6 4 2 8 8 Si 1.86805 * 120.00195 * 172.71443 * 6 4 2 9 9 H 1.48503 * 109.47054 * 264.79579 * 8 6 4 10 10 H 1.48500 * 109.46575 * 24.79344 * 8 6 4 11 11 H 1.48491 * 109.47049 * 144.79629 * 8 6 4 12 12 C 1.50697 * 109.47254 * 240.00375 * 2 1 3 13 13 O 1.20825 * 119.99929 * 239.99773 * 12 2 1 14 14 O 1.34231 * 120.00011 * 59.99808 * 12 2 1 15 15 C 1.45204 * 116.99927 * 180.02562 * 14 12 2 16 16 C 1.50698 * 109.47016 * 179.97438 * 15 14 12 17 17 C 1.38238 * 119.98635 * 269.72463 * 16 15 14 18 18 C 1.38219 * 120.00854 * 179.73046 * 17 16 15 19 19 C 1.38355 * 119.98831 * 0.54095 * 18 17 16 20 20 Cl 1.73600 * 120.01467 * 179.70730 * 19 18 17 21 21 C 1.38350 * 119.97393 * 359.73509 * 19 18 17 22 22 C 1.38218 * 119.98640 * 359.97438 * 21 19 18 23 23 H 1.09003 * 109.47025 * 297.77973 * 1 2 3 24 24 H 1.09001 * 109.47192 * 57.78356 * 1 2 3 25 25 H 1.08997 * 109.46811 * 177.78416 * 1 2 3 26 26 H 0.96998 * 120.00239 * 180.27341 * 7 6 4 27 27 H 1.09004 * 109.46741 * 299.99980 * 15 14 12 28 28 H 1.08998 * 109.46870 * 59.99730 * 15 14 12 29 29 H 1.07993 * 119.99818 * 0.02562 * 17 16 15 30 30 H 1.08003 * 120.01007 * 180.27707 * 18 17 16 31 31 H 1.07996 * 120.00858 * 179.97438 * 21 19 18 32 32 H 1.07994 * 119.99572 * 179.97438 * 22 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 6 2.0324 -0.7104 1.2305 5 1 2.6085 -1.6186 1.1322 6 6 1.7566 -0.2009 2.4815 7 7 1.1861 0.9781 2.6003 8 14 2.1999 -1.1820 4.0082 9 1 1.0172 -1.9593 4.4579 10 1 3.3131 -2.1127 3.6923 11 1 2.6219 -0.2538 5.0877 12 6 2.0324 -0.7103 -1.2305 13 8 2.7271 -1.6927 -1.1196 14 8 1.7081 -0.2517 -2.4496 15 6 2.2269 -0.9861 -3.5897 16 6 1.7619 -0.3296 -4.8640 17 6 0.5740 -0.7238 -5.4507 18 6 0.1443 -0.1180 -6.6165 19 6 0.9090 0.8752 -7.2021 20 17 0.3738 1.6312 -8.6703 21 6 2.1007 1.2653 -6.6174 22 6 2.5263 0.6631 -5.4485 23 1 -0.3633 0.4790 0.9092 24 1 -0.3633 0.5479 -0.8694 25 1 -0.3633 -1.0269 -0.0397 26 1 0.9956 1.3383 3.4806 27 1 3.3164 -0.9858 -3.5569 28 1 1.8627 -2.0129 -3.5566 29 1 -0.0209 -1.5018 -4.9957 30 1 -0.7860 -0.4229 -7.0725 31 1 2.6982 2.0403 -7.0743 32 1 3.4567 0.9672 -4.9922 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000049829081.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:32:33 Heat of formation + Delta-G solvation = -81.684032 kcal Electronic energy + Delta-G solvation = -17268.726274 eV Core-core repulsion = 14219.804822 eV Total energy + Delta-G solvation = -3048.921452 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 268.065 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -39.93288 -39.16057 -36.75503 -35.73683 -33.88185 -31.98440 -31.27920 -30.60435 -26.47367 -25.20111 -23.10419 -23.04844 -21.45213 -19.84092 -17.40038 -16.74478 -16.18598 -16.13520 -15.83748 -15.14423 -14.96494 -14.26827 -13.73131 -13.71158 -13.51953 -12.94632 -12.69786 -12.25720 -11.78111 -11.77110 -11.59970 -11.31991 -11.04310 -11.02828 -10.89077 -10.69548 -10.40790 -10.11715 -10.07930 -9.26332 -9.23442 -9.09370 -8.75960 -8.46850 -6.14640 -4.17130 0.84227 1.10255 1.89859 3.17755 3.25745 3.29285 3.35462 3.42020 3.83239 4.40437 4.55023 4.66761 4.71351 5.04855 5.12196 5.20585 5.41458 5.44390 5.56551 5.76126 5.98628 6.00287 6.09374 6.36590 6.57061 6.59815 6.80391 6.80931 7.15499 7.39636 7.64277 7.88283 8.09124 8.80527 8.91986 9.47665 10.95101 Molecular weight = 268.07amu Principal moments of inertia in cm(-1) A = 0.048160 B = 0.003337 C = 0.003262 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 581.256250 B = 8388.341902 C = 8580.556595 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.128 4.128 2 C 0.057 3.943 3 H 0.069 0.931 4 C -0.515 4.515 5 H 0.076 0.924 6 C 0.063 3.937 7 N -0.890 5.890 8 Si 0.902 3.098 9 H -0.279 1.279 10 H -0.271 1.271 11 H -0.286 1.286 12 C 0.465 3.535 13 O -0.516 6.516 14 O -0.360 6.360 15 C 0.100 3.900 16 C -0.079 4.079 17 C -0.084 4.084 18 C -0.114 4.114 19 C -0.031 4.031 20 Cl -0.075 7.075 21 C -0.114 4.114 22 C -0.084 4.084 23 H 0.083 0.917 24 H 0.027 0.973 25 H 0.032 0.968 26 H 0.264 0.736 27 H 0.075 0.925 28 H 0.075 0.925 29 H 0.135 0.865 30 H 0.135 0.865 31 H 0.135 0.865 32 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.414 0.478 -18.791 18.851 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.186 4.186 2 C 0.038 3.962 3 H 0.087 0.913 4 C -0.553 4.553 5 H 0.094 0.906 6 C -0.139 4.139 7 N -0.529 5.529 8 Si 0.729 3.271 9 H -0.205 1.205 10 H -0.196 1.196 11 H -0.212 1.212 12 C 0.310 3.690 13 O -0.403 6.403 14 O -0.279 6.279 15 C 0.025 3.975 16 C -0.080 4.080 17 C -0.102 4.102 18 C -0.132 4.132 19 C -0.058 4.058 20 Cl -0.046 7.046 21 C -0.132 4.132 22 C -0.102 4.102 23 H 0.102 0.898 24 H 0.046 0.954 25 H 0.051 0.949 26 H 0.073 0.927 27 H 0.093 0.907 28 H 0.093 0.907 29 H 0.153 0.847 30 H 0.153 0.847 31 H 0.153 0.847 32 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -1.301 0.362 -18.777 18.826 hybrid contribution 0.218 -0.464 0.623 0.806 sum -1.083 -0.102 -18.154 18.187 Atomic orbital electron populations 1.21666 0.95862 0.99626 1.01484 1.18772 0.94549 0.97379 0.85490 0.91350 1.21120 1.34761 1.10647 0.88779 0.90598 1.24936 0.95002 0.94797 0.99120 1.69951 1.42810 1.16054 1.24037 0.86405 0.78869 0.79859 0.81932 1.20533 1.19602 1.21153 1.25396 0.76596 0.83197 0.83815 1.90503 1.36367 1.26738 1.86689 1.86711 1.70416 1.55703 1.15047 1.21623 0.99033 0.94929 0.81871 1.19771 0.95425 0.97263 0.95498 1.21095 0.95149 0.99533 0.94463 1.21039 1.00066 0.95919 0.96199 1.20976 0.96585 0.97860 0.90353 1.98367 1.90093 1.81255 1.34924 1.21038 0.95250 1.00780 0.96152 1.21103 1.00171 0.94541 0.94426 0.89817 0.95398 0.94855 0.92674 0.90665 0.90694 0.84684 0.84742 0.84736 0.84663 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -2.97 8.96 37.16 0.33 -2.64 16 2 C 0.06 1.43 2.63 -92.92 -0.24 1.19 16 3 H 0.07 1.79 8.14 -51.93 -0.42 1.37 16 4 C -0.52 -14.33 8.32 -34.44 -0.29 -14.62 16 5 H 0.08 2.20 6.77 -52.49 -0.36 1.84 16 6 C 0.06 1.73 5.21 -17.82 -0.09 1.64 16 7 N -0.89 -24.76 11.92 55.43 0.66 -24.10 16 8 Si 0.90 21.29 29.54 -169.99 -5.02 16.27 16 9 H -0.28 -6.49 7.11 56.52 0.40 -6.09 16 10 H -0.27 -6.43 7.11 56.52 0.40 -6.03 16 11 H -0.29 -6.63 7.11 56.52 0.40 -6.23 16 12 C 0.47 10.71 7.25 36.00 0.26 10.97 16 13 O -0.52 -12.86 15.21 -18.75 -0.29 -13.15 16 14 O -0.36 -6.98 10.13 -39.26 -0.40 -7.38 16 15 C 0.10 1.51 5.59 36.00 0.20 1.72 16 16 C -0.08 -1.01 5.52 -104.62 -0.58 -1.59 16 17 C -0.08 -0.96 9.70 -39.59 -0.38 -1.34 16 18 C -0.11 -1.18 9.83 -39.55 -0.39 -1.57 16 19 C -0.03 -0.33 6.32 -39.50 -0.25 -0.58 16 20 Cl -0.08 -0.73 28.96 -51.86 -1.50 -2.23 16 21 C -0.11 -1.18 9.83 -39.55 -0.39 -1.57 16 22 C -0.08 -0.96 9.70 -39.59 -0.38 -1.35 16 23 H 0.08 2.08 6.59 -51.93 -0.34 1.74 16 24 H 0.03 0.57 8.14 -51.93 -0.42 0.14 16 25 H 0.03 0.74 8.14 -51.93 -0.42 0.31 16 26 H 0.26 6.95 8.31 -40.82 -0.34 6.61 16 27 H 0.08 1.10 8.08 -51.93 -0.42 0.68 16 28 H 0.07 1.09 8.07 -51.93 -0.42 0.68 16 29 H 0.14 1.36 8.06 -52.49 -0.42 0.93 16 30 H 0.13 1.13 8.06 -52.48 -0.42 0.70 16 31 H 0.13 1.13 8.06 -52.49 -0.42 0.71 16 32 H 0.14 1.36 8.06 -52.49 -0.42 0.94 16 LS Contribution 300.42 15.07 4.53 4.53 Total: -1.00 -29.63 300.42 -7.85 -37.49 By element: Atomic # 1 Polarization: 1.94 SS G_CDS: -3.63 Total: -1.69 kcal Atomic # 6 Polarization: -7.54 SS G_CDS: -2.20 Total: -9.74 kcal Atomic # 7 Polarization: -24.76 SS G_CDS: 0.66 Total: -24.10 kcal Atomic # 8 Polarization: -19.84 SS G_CDS: -0.68 Total: -20.53 kcal Atomic # 14 Polarization: 21.29 SS G_CDS: -5.02 Total: 16.27 kcal Atomic # 17 Polarization: -0.73 SS G_CDS: -1.50 Total: -2.23 kcal Total LS contribution 4.53 Total: 4.53 kcal Total: -29.63 -7.85 -37.49 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000049829081.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -44.198 kcal (2) G-P(sol) polarization free energy of solvation -29.635 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -73.833 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.851 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.486 kcal (6) G-S(sol) free energy of system = (1) + (5) -81.684 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds