Wall clock time and date at job start Mon Mar 30 2020 07:23:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 H 1.08999 * 109.47180 * 2 1 4 4 C 1.50698 * 109.47153 * 120.00120 * 2 1 3 5 5 H 1.08001 * 119.99880 * 119.99863 * 4 2 1 6 6 C 1.37875 * 120.00314 * 299.99977 * 4 2 1 7 7 N 1.31518 * 119.99408 * 359.97438 * 6 4 2 8 8 Si 1.86798 * 120.00457 * 180.02562 * 6 4 2 9 9 H 1.48498 * 109.47057 * 89.99783 * 8 6 4 10 10 H 1.48504 * 109.47298 * 210.00143 * 8 6 4 11 11 H 1.48503 * 109.46788 * 330.00115 * 8 6 4 12 12 N 1.46504 * 109.47178 * 240.00111 * 2 1 3 13 13 C 1.46497 * 119.99926 * 300.00251 * 12 2 1 14 14 C 1.34775 * 119.99904 * 119.99648 * 12 2 1 15 15 O 1.21558 * 120.00214 * 355.60535 * 14 12 2 16 16 C 1.47771 * 119.99580 * 175.60030 * 14 12 2 17 17 C 1.39553 * 120.57666 * 48.46420 * 16 14 12 18 18 N 1.31657 * 120.57798 * 179.70128 * 17 16 14 19 19 C 1.32003 * 121.91990 * 0.58107 * 18 17 16 20 20 C 1.38206 * 121.10984 * 359.70760 * 19 18 17 21 21 C 1.38604 * 119.28727 * 359.97438 * 20 19 18 22 22 Cl 1.73592 * 120.87217 * 180.02562 * 21 20 19 23 23 H 1.08999 * 109.47180 * 179.97438 * 1 2 3 24 24 H 1.08995 * 109.46851 * 59.99902 * 1 2 3 25 25 H 1.09002 * 109.46812 * 299.99685 * 1 2 3 26 26 H 0.97008 * 119.99411 * 179.97438 * 7 6 4 27 27 H 1.08999 * 109.47838 * 94.88581 * 13 12 2 28 28 H 1.09005 * 109.47309 * 214.88742 * 13 12 2 29 29 H 1.09004 * 109.47162 * 334.88151 * 13 12 2 30 30 H 1.08004 * 119.70997 * 359.97438 * 17 16 14 31 31 H 1.08001 * 119.44336 * 179.72489 * 19 18 17 32 32 H 1.07992 * 120.35792 * 180.02562 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0276 0.0000 4 6 2.0324 -0.7104 1.2304 5 1 2.6533 -1.5885 1.1313 6 6 1.6993 -0.2395 2.4827 7 7 0.9436 0.8302 2.6034 8 14 2.3226 -1.1196 4.0079 9 1 3.6306 -0.5441 4.4118 10 1 1.3445 -0.9491 5.1123 11 1 2.4881 -2.5654 3.7121 12 7 2.0184 -0.6906 -1.1962 13 6 1.6644 -2.0931 -1.4281 14 6 2.7932 -0.0356 -2.0834 15 8 3.0211 1.1490 -1.9331 16 6 3.3657 -0.7574 -3.2387 17 6 2.5615 -1.5741 -4.0349 18 7 3.0704 -2.2126 -5.0677 19 6 4.3482 -2.1196 -5.3854 20 6 5.2130 -1.3364 -4.6446 21 6 4.7269 -0.6379 -3.5506 22 17 5.7764 0.3585 -2.5918 23 1 -0.3633 -1.0276 -0.0005 24 1 -0.3633 0.5138 -0.8899 25 1 -0.3633 0.5138 0.8900 26 1 0.7090 1.1613 3.4845 27 1 0.7865 -2.1447 -2.0721 28 1 2.4986 -2.6036 -1.9094 29 1 1.4449 -2.5748 -0.4752 30 1 1.5117 -1.6797 -3.8044 31 1 4.7241 -2.6644 -6.2388 32 1 6.2562 -1.2687 -4.9157 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000088109497.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:23:32 Heat of formation + Delta-G solvation = 1.993427 kcal Electronic energy + Delta-G solvation = -18288.112630 eV Core-core repulsion = 15275.112456 eV Total energy + Delta-G solvation = -3013.000174 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 268.072 amu Computer time = 1.45 seconds Orbital eigenvalues (eV) -40.56398 -38.62151 -36.63784 -35.40937 -33.10714 -32.22813 -31.56887 -29.19453 -26.36365 -25.26820 -24.48926 -23.62298 -21.31964 -19.00236 -17.38307 -17.13051 -16.64938 -16.21867 -15.57159 -14.79834 -14.30808 -14.19959 -13.95924 -13.88694 -13.26518 -12.71223 -12.55972 -12.20883 -12.12682 -11.69709 -11.48821 -11.07766 -10.94661 -10.88532 -10.76514 -10.28748 -10.21168 -9.97154 -9.49793 -9.31413 -9.24245 -9.01863 -8.46021 -7.69537 -6.10872 -4.19072 0.67046 0.89568 1.98716 3.13865 3.25355 3.32152 3.33631 3.55275 3.82223 4.23667 4.36378 4.53387 4.77184 4.81319 5.14776 5.21054 5.43960 5.45403 5.66495 5.75667 5.90106 6.28347 6.32363 6.71707 6.78996 7.01011 7.32664 7.45789 7.66295 7.68321 7.96435 8.13550 8.40269 8.73889 8.91494 9.47331 10.94507 Molecular weight = 268.07amu Principal moments of inertia in cm(-1) A = 0.024664 B = 0.006000 C = 0.005535 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1134.984242 B = 4665.934893 C = 5057.355428 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.146 4.146 2 C 0.259 3.741 3 H 0.065 0.935 4 C -0.528 4.528 5 H 0.060 0.940 6 C 0.066 3.934 7 N -0.886 5.886 8 Si 0.899 3.101 9 H -0.280 1.280 10 H -0.285 1.285 11 H -0.274 1.274 12 N -0.581 5.581 13 C 0.078 3.922 14 C 0.548 3.452 15 O -0.527 6.527 16 C -0.159 4.159 17 C 0.141 3.859 18 N -0.484 5.484 19 C 0.118 3.882 20 C -0.173 4.173 21 C 0.043 3.957 22 Cl -0.026 7.026 23 H 0.031 0.969 24 H 0.012 0.988 25 H 0.094 0.906 26 H 0.264 0.736 27 H 0.047 0.953 28 H 0.051 0.949 29 H 0.087 0.913 30 H 0.171 0.829 31 H 0.166 0.834 32 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.420 -6.736 -13.014 15.625 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C 0.159 3.841 3 H 0.083 0.917 4 C -0.566 4.566 5 H 0.078 0.922 6 C -0.137 4.137 7 N -0.524 5.524 8 Si 0.726 3.274 9 H -0.206 1.206 10 H -0.211 1.211 11 H -0.199 1.199 12 N -0.311 5.311 13 C -0.066 4.066 14 C 0.332 3.668 15 O -0.404 6.404 16 C -0.165 4.165 17 C -0.017 4.017 18 N -0.193 5.193 19 C -0.038 4.038 20 C -0.193 4.193 21 C 0.007 3.993 22 Cl 0.003 6.997 23 H 0.050 0.950 24 H 0.031 0.969 25 H 0.113 0.887 26 H 0.074 0.926 27 H 0.065 0.935 28 H 0.070 0.930 29 H 0.106 0.894 30 H 0.188 0.812 31 H 0.183 0.817 32 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 4.978 -6.413 -13.163 15.465 hybrid contribution 1.009 0.032 1.452 1.769 sum 5.988 -6.381 -11.711 14.619 Atomic orbital electron populations 1.22089 0.97888 0.99533 1.00979 1.19020 0.91070 0.94534 0.79434 0.91697 1.21294 1.31991 1.13142 0.90195 0.92197 1.24880 0.94867 0.94970 0.98947 1.69882 1.36178 1.22524 1.23836 0.86491 0.78682 0.79868 0.82337 1.20591 1.21070 1.19901 1.48205 1.48094 1.11637 1.23202 1.21791 0.98641 0.83244 1.02879 1.17830 0.80085 0.86894 0.82005 1.90785 1.60184 1.14577 1.74840 1.21294 0.93614 1.01162 1.00427 1.23218 1.00490 0.89300 0.88737 1.67698 1.14310 1.21281 1.16039 1.22895 0.88478 0.94531 0.97915 1.22061 1.02571 0.99241 0.95470 1.21402 0.90993 0.93633 0.93267 1.98440 1.64318 1.66960 1.69964 0.95034 0.96856 0.88708 0.92618 0.93463 0.93026 0.89427 0.81159 0.81651 0.83370 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -3.42 8.97 37.16 0.33 -3.09 16 2 C 0.26 6.50 2.63 -69.08 -0.18 6.32 16 3 H 0.07 1.89 6.91 -51.93 -0.36 1.53 16 4 C -0.53 -14.02 7.96 -34.44 -0.27 -14.29 16 5 H 0.06 1.57 7.42 -52.49 -0.39 1.18 16 6 C 0.07 1.78 5.30 -17.82 -0.09 1.68 16 7 N -0.89 -24.75 11.32 55.43 0.63 -24.12 16 8 Si 0.90 20.84 29.54 -169.99 -5.02 15.82 16 9 H -0.28 -6.56 7.11 56.52 0.40 -6.16 16 10 H -0.28 -6.54 7.11 56.52 0.40 -6.13 16 11 H -0.27 -6.22 7.11 56.52 0.40 -5.82 16 12 N -0.58 -12.23 2.75 -176.40 -0.49 -12.72 16 13 C 0.08 1.30 8.01 59.85 0.48 1.78 16 14 C 0.55 11.45 6.83 -12.36 -0.08 11.36 16 15 O -0.53 -12.89 15.29 5.31 0.08 -12.81 16 16 C -0.16 -2.65 4.92 -104.79 -0.52 -3.16 16 17 C 0.14 1.97 8.96 -17.14 -0.15 1.82 16 18 N -0.48 -6.21 10.34 -12.93 -0.13 -6.35 16 19 C 0.12 1.23 11.17 -17.49 -0.20 1.04 16 20 C -0.17 -1.93 9.92 -39.46 -0.39 -2.33 16 21 C 0.04 0.65 6.39 -38.73 -0.25 0.40 16 22 Cl -0.03 -0.43 27.39 -51.86 -1.42 -1.85 16 23 H 0.03 0.67 7.67 -51.93 -0.40 0.27 16 24 H 0.01 0.27 8.14 -51.93 -0.42 -0.15 16 25 H 0.09 2.44 6.07 -51.93 -0.32 2.13 16 26 H 0.26 7.02 8.31 -40.82 -0.34 6.68 16 27 H 0.05 0.66 7.08 -51.93 -0.37 0.29 16 28 H 0.05 0.76 6.25 -51.93 -0.32 0.44 16 29 H 0.09 1.54 7.10 -51.93 -0.37 1.17 16 30 H 0.17 2.14 6.27 -52.48 -0.33 1.82 16 31 H 0.17 1.08 8.06 -52.49 -0.42 0.66 16 32 H 0.15 1.21 8.06 -52.49 -0.42 0.79 16 LS Contribution 286.34 15.07 4.32 4.32 Total: -1.00 -30.87 286.34 -6.62 -37.48 By element: Atomic # 1 Polarization: 1.95 SS G_CDS: -3.25 Total: -1.30 kcal Atomic # 6 Polarization: 2.85 SS G_CDS: -1.32 Total: 1.53 kcal Atomic # 7 Polarization: -43.20 SS G_CDS: 0.01 Total: -43.19 kcal Atomic # 8 Polarization: -12.89 SS G_CDS: 0.08 Total: -12.81 kcal Atomic # 14 Polarization: 20.84 SS G_CDS: -5.02 Total: 15.82 kcal Atomic # 17 Polarization: -0.43 SS G_CDS: -1.42 Total: -1.85 kcal Total LS contribution 4.32 Total: 4.32 kcal Total: -30.87 -6.62 -37.48 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000088109497.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 39.477 kcal (2) G-P(sol) polarization free energy of solvation -30.867 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.610 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.616 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.483 kcal (6) G-S(sol) free energy of system = (1) + (5) 1.993 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.45 seconds