Wall clock time and date at job start Mon Mar 30 2020 07:18:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.53002 * 109.47370 * 2 1 4 4 N 1.46500 * 109.46589 * 119.99452 * 2 1 3 5 5 C 1.36889 * 119.99884 * 81.92737 * 4 2 1 6 6 H 1.08006 * 119.99782 * 207.41354 * 5 4 2 7 7 C 1.39038 * 120.00219 * 27.41547 * 5 4 2 8 8 N 1.31376 * 119.99836 * 24.29901 * 7 5 4 9 9 Si 1.86792 * 120.00204 * 204.30321 * 7 5 4 10 10 H 1.48500 * 109.47019 * 89.99687 * 9 7 5 11 11 H 1.48499 * 109.47413 * 209.99673 * 9 7 5 12 12 H 1.48506 * 109.47060 * 330.00137 * 9 7 5 13 13 C 1.34779 * 120.00121 * 261.92240 * 4 2 1 14 14 O 1.21602 * 119.99808 * 203.86171 * 13 4 2 15 15 C 1.47662 * 120.00048 * 23.86466 * 13 4 2 16 16 C 1.40149 * 120.55201 * 186.93593 * 15 13 4 17 17 C 1.38246 * 118.30119 * 179.97438 * 16 15 13 18 18 C 1.38569 * 119.29866 * 0.02562 * 17 16 15 19 19 Cl 1.73596 * 119.46747 * 179.97438 * 18 17 16 20 20 N 1.32048 * 121.06131 * 359.97438 * 18 17 16 21 21 C 1.31679 * 121.86864 * 0.02562 * 20 18 17 22 22 H 1.09000 * 109.48008 * 274.46012 * 1 2 3 23 23 H 1.09008 * 109.46856 * 34.45826 * 1 2 3 24 24 H 1.09001 * 109.47260 * 154.45330 * 1 2 3 25 25 H 1.08996 * 109.47658 * 239.99305 * 2 1 3 26 26 H 1.08994 * 109.47252 * 227.77743 * 3 2 1 27 27 H 1.09010 * 109.46646 * 347.77686 * 3 2 1 28 28 H 1.08993 * 109.47476 * 107.77219 * 3 2 1 29 29 H 0.96992 * 119.99964 * 179.97438 * 8 7 5 30 30 H 1.07997 * 120.85410 * 359.96097 * 16 15 13 31 31 H 1.08001 * 120.34998 * 179.72654 * 17 16 15 32 32 H 1.07998 * 119.71394 * 180.02562 * 21 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 7 2.0182 -0.6905 1.1963 5 6 2.0893 -2.0574 1.2164 6 1 2.0099 -2.5885 2.1535 7 6 2.2637 -2.7621 0.0306 8 7 2.8235 -2.1778 -1.0044 9 14 1.7021 -4.5394 -0.0910 10 1 0.2946 -4.5826 -0.5625 11 1 2.5686 -5.2677 -1.0522 12 1 1.7964 -5.1808 1.2450 13 6 2.3974 0.0200 2.2770 14 8 3.1803 -0.4584 3.0750 15 6 1.8621 1.3793 2.4919 16 6 2.3552 2.1835 3.5284 17 6 1.8210 3.4487 3.6871 18 6 0.8244 3.8770 2.8250 19 17 0.1501 5.4646 3.0207 20 7 0.3793 3.0970 1.8569 21 6 0.8566 1.8847 1.6660 22 1 -0.3635 0.0799 1.0245 23 1 -0.3633 0.8474 -0.5815 24 1 -0.3634 -0.9272 -0.4432 25 1 1.8934 -0.5139 -0.8899 26 1 2.8122 1.5548 -0.7610 27 1 1.2141 2.1199 -0.2176 28 1 2.4569 1.6805 0.9785 29 1 2.9455 -2.6694 -1.8316 30 1 3.1324 1.8240 4.1865 31 1 2.1734 4.0945 4.4778 32 1 0.4673 1.2765 0.8629 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000126828469.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:18:17 Heat of formation + Delta-G solvation = 107.218339 kcal Electronic energy + Delta-G solvation = -18878.381058 eV Core-core repulsion = 15869.943779 eV Total energy + Delta-G solvation = -3008.437279 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 268.072 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -41.48351 -38.36129 -36.48928 -36.14083 -33.56093 -32.22405 -31.05829 -30.14915 -26.84332 -25.45023 -23.60777 -23.44083 -21.24464 -19.34093 -17.52971 -17.35740 -16.25769 -16.01930 -15.12135 -14.95894 -14.68372 -14.14068 -13.83220 -13.32025 -13.12628 -12.69943 -12.61053 -12.19064 -11.81253 -11.56347 -11.39122 -11.21626 -11.13340 -11.01367 -10.73405 -10.49410 -10.40179 -10.00798 -9.59239 -9.35027 -9.27975 -8.65089 -8.02229 -7.76519 -6.52168 -4.07889 0.87808 1.49843 1.97605 3.03484 3.15019 3.18970 3.47185 3.92627 4.20743 4.49594 4.71626 4.88708 5.10350 5.14368 5.26837 5.42293 5.44838 5.57598 5.75310 5.92693 6.04345 6.13032 6.16842 6.27342 6.47774 6.52953 6.70930 6.81721 7.15393 7.41269 7.91561 7.94998 8.29364 8.94129 9.14212 9.71133 10.42993 Molecular weight = 268.07amu Principal moments of inertia in cm(-1) A = 0.038472 B = 0.005646 C = 0.005251 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 727.627976 B = 4958.405421 C = 5331.481383 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.183 4.183 2 C 0.094 3.906 3 C -0.217 4.217 4 N -0.425 5.425 5 C -0.293 4.293 6 H 0.100 0.900 7 C 0.033 3.967 8 N -0.853 5.853 9 Si 0.925 3.075 10 H -0.274 1.274 11 H -0.282 1.282 12 H -0.267 1.267 13 C 0.485 3.515 14 O -0.572 6.572 15 C -0.166 4.166 16 C -0.035 4.035 17 C -0.176 4.176 18 C 0.169 3.831 19 Cl -0.050 7.050 20 N -0.504 5.504 21 C 0.116 3.884 22 H 0.065 0.935 23 H 0.065 0.935 24 H 0.071 0.929 25 H 0.149 0.851 26 H 0.058 0.942 27 H 0.077 0.923 28 H 0.094 0.906 29 H 0.274 0.726 30 H 0.149 0.851 31 H 0.140 0.860 32 H 0.232 0.768 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.810 8.476 1.598 9.876 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.240 4.240 2 C -0.011 4.011 3 C -0.273 4.273 4 N -0.142 5.142 5 C -0.420 4.420 6 H 0.118 0.882 7 C -0.172 4.172 8 N -0.490 5.490 9 Si 0.751 3.249 10 H -0.200 1.200 11 H -0.207 1.207 12 H -0.191 1.191 13 C 0.275 3.725 14 O -0.456 6.456 15 C -0.172 4.172 16 C -0.061 4.061 17 C -0.197 4.197 18 C 0.007 3.993 19 Cl -0.022 7.022 20 N -0.216 5.216 21 C -0.042 4.042 22 H 0.084 0.916 23 H 0.084 0.916 24 H 0.089 0.911 25 H 0.166 0.834 26 H 0.077 0.923 27 H 0.095 0.905 28 H 0.111 0.889 29 H 0.084 0.916 30 H 0.167 0.833 31 H 0.158 0.842 32 H 0.247 0.753 Dipole moment (debyes) X Y Z Total from point charges -5.060 8.619 1.269 10.075 hybrid contribution 0.415 -0.736 0.354 0.916 sum -4.645 7.883 1.622 9.292 Atomic orbital electron populations 1.22443 0.97395 1.02405 1.01765 1.21809 0.92039 0.92072 0.95150 1.24081 1.01915 0.96971 1.04340 1.43539 1.53580 1.05978 1.11113 1.19685 1.47256 0.79656 0.95416 0.88235 1.25407 0.95381 1.00558 0.95897 1.69671 1.36573 1.38442 1.04326 0.85927 0.78734 0.81470 0.78761 1.19974 1.20746 1.19097 1.17647 0.84679 0.83951 0.86245 1.90625 1.35071 1.70986 1.48965 1.21526 0.99684 0.98223 0.97734 1.21596 0.97654 0.91582 0.95264 1.21576 0.98793 0.97690 1.01664 1.21731 0.94298 0.88684 0.94546 1.98365 1.85351 1.22215 1.96249 1.67164 1.28735 1.05734 1.19998 1.26032 0.90346 0.91279 0.96530 0.91627 0.91645 0.91060 0.83407 0.92290 0.90497 0.88876 0.91558 0.83325 0.84187 0.75306 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -3.15 8.14 37.16 0.30 -2.85 16 2 C 0.09 1.93 2.72 -67.93 -0.18 1.74 16 3 C -0.22 -4.02 7.68 36.92 0.28 -3.73 16 4 N -0.42 -10.23 2.54 -108.85 -0.28 -10.51 16 5 C -0.29 -7.56 8.96 -15.00 -0.13 -7.69 16 6 H 0.10 2.67 7.90 -52.48 -0.41 2.25 16 7 C 0.03 0.81 5.04 -17.45 -0.09 0.72 16 8 N -0.85 -21.15 10.90 55.50 0.61 -20.54 16 9 Si 0.93 19.00 29.62 -169.99 -5.03 13.97 16 10 H -0.27 -5.46 7.11 56.52 0.40 -5.06 16 11 H -0.28 -5.78 7.11 56.52 0.40 -5.38 16 12 H -0.27 -5.53 7.11 56.52 0.40 -5.13 16 13 C 0.48 11.72 6.74 -12.41 -0.08 11.63 16 14 O -0.57 -15.68 16.54 5.28 0.09 -15.59 16 15 C -0.17 -3.31 4.01 -104.83 -0.42 -3.73 16 16 C -0.03 -0.61 9.71 -38.86 -0.38 -0.99 16 17 C -0.18 -2.64 9.86 -39.46 -0.39 -3.03 16 18 C 0.17 2.70 7.27 -17.34 -0.13 2.58 16 19 Cl -0.05 -0.68 29.10 -51.86 -1.51 -2.19 16 20 N -0.50 -8.80 10.27 -13.33 -0.14 -8.94 16 21 C 0.12 2.10 5.71 -17.35 -0.10 2.01 16 22 H 0.07 1.14 6.54 -51.93 -0.34 0.80 16 23 H 0.06 0.94 7.28 -51.92 -0.38 0.56 16 24 H 0.07 1.23 8.14 -51.93 -0.42 0.81 16 25 H 0.15 3.36 4.99 -51.93 -0.26 3.10 16 26 H 0.06 1.07 8.14 -51.93 -0.42 0.65 16 27 H 0.08 1.27 5.56 -51.92 -0.29 0.98 16 28 H 0.09 1.86 3.03 -94.02 -0.29 1.57 16 29 H 0.27 6.34 8.31 -40.82 -0.34 6.00 16 30 H 0.15 2.49 7.75 -52.49 -0.41 2.08 16 31 H 0.14 1.65 8.06 -52.49 -0.42 1.23 16 32 H 0.23 4.05 0.68 -98.90 -0.07 3.98 16 LS Contribution 272.51 15.07 4.11 4.11 Total: -1.00 -28.26 272.51 -6.32 -34.58 By element: Atomic # 1 Polarization: 11.30 SS G_CDS: -2.84 Total: 8.46 kcal Atomic # 6 Polarization: -2.03 SS G_CDS: -1.32 Total: -3.35 kcal Atomic # 7 Polarization: -40.18 SS G_CDS: 0.19 Total: -39.99 kcal Atomic # 8 Polarization: -15.68 SS G_CDS: 0.09 Total: -15.59 kcal Atomic # 14 Polarization: 19.00 SS G_CDS: -5.03 Total: 13.97 kcal Atomic # 17 Polarization: -0.68 SS G_CDS: -1.51 Total: -2.19 kcal Total LS contribution 4.11 Total: 4.11 kcal Total: -28.26 -6.32 -34.58 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000126828469.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 141.796 kcal (2) G-P(sol) polarization free energy of solvation -28.262 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 113.534 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.316 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.578 kcal (6) G-S(sol) free energy of system = (1) + (5) 107.218 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds