Wall clock time and date at job start Mon Mar 30 2020 06:31:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.35601 * 116.99884 * 2 1 4 4 C 1.38647 * 120.16538 * 0.28340 * 3 2 1 5 5 C 1.38099 * 120.14911 * 180.27239 * 4 3 2 6 6 C 1.38545 * 120.48355 * 359.71987 * 5 4 3 7 7 C 1.37873 * 120.32055 * 0.02562 * 6 5 4 8 8 Cl 1.73599 * 120.07801 * 180.02562 * 7 6 5 9 9 C 1.40159 * 119.83985 * 359.97438 * 7 6 5 10 10 C 1.46699 * 120.23178 * 180.02562 * 9 7 6 11 11 O 1.21304 * 119.99613 * 95.54886 * 10 9 7 12 12 C 1.50700 * 120.00159 * 275.55099 * 10 9 7 13 13 H 1.09001 * 109.46975 * 32.03301 * 12 10 9 14 14 C 1.53000 * 109.46872 * 272.03531 * 12 10 9 15 15 C 1.50702 * 109.47014 * 152.03816 * 12 10 9 16 16 H 1.07998 * 119.99826 * 359.97438 * 15 12 10 17 17 C 1.37871 * 119.99566 * 179.97438 * 15 12 10 18 18 N 1.31514 * 120.00669 * 359.97438 * 17 15 12 19 19 Si 1.86805 * 119.99650 * 179.97438 * 17 15 12 20 20 H 1.48499 * 109.47017 * 60.00105 * 19 17 15 21 21 H 1.48501 * 109.46790 * 179.97438 * 19 17 15 22 22 H 1.48489 * 109.47413 * 299.99977 * 19 17 15 23 23 H 1.09009 * 109.47127 * 299.99381 * 1 2 3 24 24 H 1.08998 * 109.47522 * 59.99468 * 1 2 3 25 25 H 1.09003 * 109.47152 * 179.97438 * 1 2 3 26 26 H 1.07997 * 119.92555 * 359.97438 * 4 3 2 27 27 H 1.07999 * 119.75740 * 179.74470 * 5 4 3 28 28 H 1.07992 * 119.84429 * 179.97438 * 6 5 4 29 29 H 1.09001 * 109.47337 * 300.00432 * 14 12 10 30 30 H 1.09004 * 109.47025 * 179.97438 * 14 12 10 31 31 H 1.09001 * 109.47375 * 60.00068 * 14 12 10 32 32 H 0.96996 * 120.00417 * 180.02562 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0445 1.2082 0.0000 4 6 1.2928 2.3732 0.0059 5 6 1.9200 3.6035 0.0003 6 6 3.3029 3.6873 -0.0056 7 6 4.0697 2.5415 -0.0063 8 17 5.8020 2.6539 -0.0129 9 6 3.4472 1.2857 -0.0005 10 6 4.2547 0.0610 -0.0007 11 8 4.5079 -0.4986 1.0454 12 6 4.7696 -0.5019 -1.3003 13 1 4.9650 0.3131 -1.9972 14 6 3.7229 -1.4442 -1.8982 15 6 6.0452 -1.2636 -1.0475 16 1 6.4433 -1.3327 -0.0459 17 6 6.7037 -1.8721 -2.0948 18 7 6.2186 -1.7884 -3.3143 19 14 8.2853 -2.8156 -1.7815 20 1 8.0196 -3.9255 -0.8313 21 1 8.7919 -3.3714 -3.0620 22 1 9.3011 -1.9006 -1.2021 23 1 -0.3634 0.5138 0.8901 24 1 -0.3634 0.5139 -0.8899 25 1 -0.3634 -1.0277 -0.0005 26 1 0.2142 2.3183 0.0101 27 1 1.3282 4.5069 0.0007 28 1 3.7826 4.6548 -0.0104 29 1 3.5274 -2.2592 -1.2012 30 1 4.0952 -1.8511 -2.8384 31 1 2.8003 -0.8934 -2.0810 32 1 6.6818 -2.2169 -4.0510 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000162040032.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:31:51 Heat of formation + Delta-G solvation = -57.122142 kcal Electronic energy + Delta-G solvation = -18383.757476 eV Core-core repulsion = 15335.901107 eV Total energy + Delta-G solvation = -3047.856368 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 268.065 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -40.26915 -38.18871 -37.29725 -35.98417 -33.66698 -31.41099 -30.11689 -29.97157 -27.35146 -25.10236 -24.35157 -22.10478 -21.82216 -19.13717 -17.86809 -16.42536 -16.28273 -15.85642 -15.68911 -15.03333 -14.80970 -14.23189 -13.98665 -13.67610 -13.01418 -12.79088 -12.53861 -12.27241 -11.77893 -11.71461 -11.44822 -11.24884 -10.99409 -10.79454 -10.69418 -10.65245 -10.58368 -10.13930 -10.01563 -8.91841 -8.69724 -8.45377 -8.27746 -8.12196 -5.96229 -4.00864 1.12239 1.35581 2.27745 2.95357 3.35883 3.38949 3.41262 3.46897 3.61187 4.46125 4.66788 4.82811 5.01206 5.12514 5.14630 5.25036 5.34750 5.36532 5.46108 5.69075 6.08741 6.18591 6.29895 6.53487 6.57752 6.83144 7.03666 7.11236 7.37485 7.59751 7.83974 8.07195 8.30105 8.64819 9.02685 9.62763 11.10559 Molecular weight = 268.07amu Principal moments of inertia in cm(-1) A = 0.021042 B = 0.007309 C = 0.005989 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1330.369302 B = 3829.744259 C = 4674.261541 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.300 6.300 3 C 0.164 3.836 4 C -0.211 4.211 5 C -0.068 4.068 6 C -0.152 4.152 7 C 0.024 3.976 8 Cl -0.042 7.042 9 C -0.160 4.160 10 C 0.418 3.582 11 O -0.449 6.449 12 C 0.015 3.985 13 H 0.050 0.950 14 C -0.123 4.123 15 C -0.501 4.501 16 H 0.066 0.934 17 C 0.062 3.938 18 N -0.893 5.893 19 Si 0.896 3.104 20 H -0.276 1.276 21 H -0.287 1.287 22 H -0.277 1.277 23 H 0.055 0.945 24 H 0.057 0.943 25 H 0.102 0.898 26 H 0.135 0.865 27 H 0.133 0.867 28 H 0.136 0.864 29 H 0.031 0.969 30 H 0.092 0.908 31 H 0.014 0.986 32 H 0.261 0.739 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.595 10.369 3.870 16.030 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.212 6.212 3 C 0.118 3.882 4 C -0.229 4.229 5 C -0.086 4.086 6 C -0.171 4.171 7 C -0.003 4.003 8 Cl -0.012 7.012 9 C -0.162 4.162 10 C 0.293 3.707 11 O -0.321 6.321 12 C -0.004 4.004 13 H 0.068 0.932 14 C -0.181 4.181 15 C -0.539 4.539 16 H 0.084 0.916 17 C -0.139 4.139 18 N -0.532 5.532 19 Si 0.724 3.276 20 H -0.201 1.201 21 H -0.213 1.213 22 H -0.202 1.202 23 H 0.073 0.927 24 H 0.076 0.924 25 H 0.120 0.880 26 H 0.152 0.848 27 H 0.151 0.849 28 H 0.154 0.846 29 H 0.051 0.949 30 H 0.111 0.889 31 H 0.033 0.967 32 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges -11.176 9.805 4.248 15.463 hybrid contribution 0.628 -0.207 -0.008 0.662 sum -10.548 9.598 4.240 14.879 Atomic orbital electron populations 1.23115 0.78225 1.04305 1.01157 1.86153 1.21364 1.26011 1.87657 1.18771 0.90215 0.84856 0.94383 1.21199 1.00180 0.92025 1.09535 1.20868 0.93649 0.97164 0.96909 1.20844 0.93605 0.97198 1.05491 1.20670 0.86010 0.92781 1.00887 1.98419 1.08138 1.98297 1.96364 1.20272 0.92164 0.96475 1.07338 1.23134 0.74093 0.80312 0.93174 1.90404 1.48799 1.57302 1.35631 1.19127 0.95502 0.96482 0.89273 0.93242 1.21602 0.95023 0.98253 1.03188 1.20999 1.05853 1.32339 0.94757 0.91630 1.24900 0.97709 0.96282 0.94973 1.69863 1.39474 1.44704 0.99190 0.86585 0.83448 0.80315 0.77295 1.20145 1.21286 1.20212 0.92668 0.92432 0.87956 0.84771 0.84897 0.84620 0.94947 0.88898 0.96704 0.92909 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.29 9.81 101.05 0.99 1.28 16 2 O -0.30 -5.09 9.64 -18.50 -0.18 -5.27 16 3 C 0.16 2.83 6.71 -38.59 -0.26 2.57 16 4 C -0.21 -2.72 9.03 -39.48 -0.36 -3.07 16 5 C -0.07 -0.79 10.03 -39.52 -0.40 -1.19 16 6 C -0.15 -2.09 9.80 -39.60 -0.39 -2.48 16 7 C 0.02 0.42 6.36 -38.99 -0.25 0.18 16 8 Cl -0.04 -0.77 28.05 -51.86 -1.45 -2.23 16 9 C -0.16 -3.24 5.55 -104.92 -0.58 -3.82 16 10 C 0.42 10.20 4.23 -30.89 -0.13 10.07 16 11 O -0.45 -12.08 16.66 5.54 0.09 -11.99 16 12 C 0.02 0.40 2.55 -92.92 -0.24 0.16 16 13 H 0.05 1.35 8.12 -51.93 -0.42 0.93 16 14 C -0.12 -3.08 8.95 37.16 0.33 -2.75 16 15 C -0.50 -14.53 8.33 -34.44 -0.29 -14.82 16 16 H 0.07 1.97 7.09 -52.49 -0.37 1.60 16 17 C 0.06 1.77 5.30 -17.82 -0.09 1.67 16 18 N -0.89 -25.67 11.32 55.43 0.63 -25.04 16 19 Si 0.90 22.14 29.54 -169.99 -5.02 17.12 16 20 H -0.28 -6.81 7.11 56.52 0.40 -6.41 16 21 H -0.29 -6.92 7.11 56.52 0.40 -6.52 16 22 H -0.28 -6.78 7.11 56.52 0.40 -6.38 16 23 H 0.05 0.48 7.65 -51.92 -0.40 0.08 16 24 H 0.06 0.51 7.67 -51.93 -0.40 0.11 16 25 H 0.10 0.93 8.14 -51.93 -0.42 0.50 16 26 H 0.13 1.27 6.29 -52.49 -0.33 0.94 16 27 H 0.13 1.05 8.06 -52.49 -0.42 0.63 16 28 H 0.14 1.49 8.06 -52.49 -0.42 1.07 16 29 H 0.03 0.81 8.14 -51.93 -0.42 0.38 16 30 H 0.09 2.49 6.07 -51.93 -0.32 2.17 16 31 H 0.01 0.32 7.84 -51.93 -0.41 -0.09 16 32 H 0.26 7.15 8.31 -40.82 -0.34 6.81 16 LS Contribution 294.61 15.07 4.44 4.44 Total: -1.00 -32.70 294.61 -6.62 -39.32 By element: Atomic # 1 Polarization: -0.68 SS G_CDS: -3.47 Total: -4.15 kcal Atomic # 6 Polarization: -10.55 SS G_CDS: -1.66 Total: -12.21 kcal Atomic # 7 Polarization: -25.67 SS G_CDS: 0.63 Total: -25.04 kcal Atomic # 8 Polarization: -17.17 SS G_CDS: -0.09 Total: -17.25 kcal Atomic # 14 Polarization: 22.14 SS G_CDS: -5.02 Total: 17.12 kcal Atomic # 17 Polarization: -0.77 SS G_CDS: -1.45 Total: -2.23 kcal Total LS contribution 4.44 Total: 4.44 kcal Total: -32.70 -6.62 -39.32 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000162040032.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -17.803 kcal (2) G-P(sol) polarization free energy of solvation -32.701 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -50.504 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.618 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.319 kcal (6) G-S(sol) free energy of system = (1) + (5) -57.122 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds