Wall clock time and date at job start Mon Mar 30 2020 07:06:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.38265 * 119.96779 * 2 1 4 4 C 1.38280 * 120.00619 * 179.97438 * 3 2 1 5 5 Cl 1.73608 * 120.01974 * 179.97438 * 4 3 2 6 6 C 1.38587 * 119.95502 * 359.97438 * 4 3 2 7 7 F 1.35101 * 120.03049 * 179.97438 * 6 4 3 8 8 C 1.38402 * 119.93885 * 0.04061 * 6 4 3 9 9 C 1.50697 * 120.00483 * 180.02562 * 8 6 4 10 10 H 1.09000 * 109.47449 * 359.97289 * 9 8 6 11 11 C 1.50699 * 109.47192 * 119.97582 * 9 8 6 12 12 H 1.07993 * 120.00064 * 0.02562 * 11 9 8 13 13 C 1.37879 * 119.99930 * 179.97438 * 11 9 8 14 14 N 1.31518 * 119.99854 * 0.02562 * 13 11 9 15 15 Si 1.86798 * 120.00057 * 180.02562 * 13 11 9 16 16 H 1.48503 * 109.46785 * 359.97438 * 15 13 11 17 17 H 1.48500 * 109.47406 * 119.99663 * 15 13 11 18 18 H 1.48501 * 109.47158 * 240.00235 * 15 13 11 19 19 C 1.53007 * 109.46909 * 239.97534 * 9 8 6 20 20 C 1.52996 * 117.49823 * 128.62334 * 19 9 8 21 21 C 1.52995 * 117.49723 * 59.99720 * 19 9 8 22 22 C 1.38219 * 119.96952 * 180.02562 * 2 1 3 23 23 H 1.08999 * 109.46932 * 89.99791 * 1 2 3 24 24 H 1.08992 * 109.47391 * 210.00121 * 1 2 3 25 25 H 1.09006 * 109.46827 * 330.00076 * 1 2 3 26 26 H 1.07999 * 119.99414 * 359.72563 * 3 2 1 27 27 H 0.97002 * 119.99758 * 180.02562 * 14 13 11 28 28 H 1.09000 * 115.54806 * 274.33238 * 19 9 8 29 29 H 1.08990 * 117.50246 * 359.97438 * 20 19 9 30 30 H 1.09004 * 117.49711 * 145.02574 * 20 19 9 31 31 H 1.09007 * 117.49977 * 214.97785 * 21 19 9 32 32 H 1.08995 * 117.50525 * 0.02562 * 21 19 9 33 33 H 1.08000 * 119.97349 * 0.02562 * 22 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1976 1.1978 0.0000 4 6 3.5804 1.1987 0.0005 5 17 4.4480 2.7025 -0.0001 6 6 4.2732 -0.0016 0.0016 7 9 5.6243 -0.0024 0.0016 8 6 3.5798 -1.1993 0.0013 9 6 4.3316 -2.5054 0.0030 10 1 5.4036 -2.3076 0.0039 11 6 3.9653 -3.2942 1.2337 12 1 3.2585 -2.8905 1.9434 13 6 4.5319 -4.5320 1.4531 14 7 5.3923 -5.0239 0.5886 15 14 4.0773 -5.5101 2.9782 16 1 3.0963 -4.7410 3.7853 17 1 3.4778 -6.8072 2.5740 18 1 5.2968 -5.7594 3.7881 19 6 3.9622 -3.3081 -1.2460 20 6 5.1085 -3.8426 -2.1069 21 6 4.2574 -2.6735 -2.6065 22 6 2.1974 -1.1974 -0.0005 23 1 -0.3633 0.0000 -1.0277 24 1 -0.3634 -0.8899 0.5138 25 1 -0.3633 0.8901 0.5139 26 1 1.6570 2.1327 -0.0045 27 1 5.7906 -5.8948 0.7428 28 1 3.0666 -3.9236 -1.1614 29 1 6.1258 -3.6221 -1.7837 30 1 4.9672 -4.8100 -2.5889 31 1 3.5561 -2.8718 -3.4172 32 1 4.7150 -1.6843 -2.6118 33 1 1.6565 -2.1321 -0.0014 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260556181.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:06:59 Heat of formation + Delta-G solvation = -19.516412 kcal Electronic energy + Delta-G solvation = -18327.246750 eV Core-core repulsion = 15293.393879 eV Total energy + Delta-G solvation = -3033.852872 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 268.073 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -48.26941 -39.04178 -36.71348 -36.10006 -32.92917 -32.07486 -30.97790 -27.40371 -26.35364 -23.77627 -22.16109 -21.30911 -20.62638 -18.97755 -17.10151 -16.75605 -15.98198 -15.23467 -15.06750 -14.58596 -14.18799 -13.75892 -13.45266 -13.12946 -12.93452 -12.90948 -12.31313 -12.20072 -12.02395 -11.38019 -11.17017 -11.02260 -10.90025 -10.75233 -10.56969 -10.49795 -10.15258 -9.88378 -9.76984 -8.86012 -8.82155 -8.38090 -8.17685 -7.93390 -6.06121 -4.14362 1.47118 1.64843 2.33066 3.25483 3.34476 3.37699 3.94915 4.38618 4.65510 4.99833 5.06507 5.24105 5.28501 5.44547 5.59342 5.74369 5.79006 5.92912 6.01154 6.12284 6.17026 6.28160 6.42468 6.48275 6.56835 6.77619 6.82185 6.95425 7.09372 7.19458 7.31743 7.41620 7.69351 7.88510 8.22478 8.87296 9.50174 10.99698 Molecular weight = 268.07amu Principal moments of inertia in cm(-1) A = 0.018272 B = 0.006850 C = 0.006495 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1532.038730 B = 4086.812514 C = 4310.219655 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.107 4.107 2 C -0.094 4.094 3 C -0.113 4.113 4 C -0.071 4.071 5 Cl -0.074 7.074 6 C 0.091 3.909 7 F -0.129 7.129 8 C -0.043 4.043 9 C 0.103 3.897 10 H 0.045 0.955 11 C -0.518 4.518 12 H 0.060 0.940 13 C 0.070 3.930 14 N -0.871 5.871 15 Si 0.890 3.110 16 H -0.273 1.273 17 H -0.284 1.284 18 H -0.284 1.284 19 C -0.082 4.082 20 C -0.134 4.134 21 C -0.227 4.227 22 C -0.076 4.076 23 H 0.068 0.932 24 H 0.069 0.931 25 H 0.063 0.937 26 H 0.130 0.870 27 H 0.260 0.740 28 H 0.085 0.915 29 H 0.086 0.914 30 H 0.072 0.928 31 H 0.073 0.927 32 H 0.075 0.925 33 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.714 8.951 -3.072 11.604 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.164 4.164 2 C -0.094 4.094 3 C -0.131 4.131 4 C -0.098 4.098 5 Cl -0.045 7.045 6 C 0.071 3.929 7 F -0.108 7.108 8 C -0.044 4.044 9 C 0.085 3.915 10 H 0.063 0.937 11 C -0.556 4.556 12 H 0.078 0.922 13 C -0.134 4.134 14 N -0.507 5.507 15 Si 0.718 3.282 16 H -0.197 1.197 17 H -0.210 1.210 18 H -0.210 1.210 19 C -0.101 4.101 20 C -0.171 4.171 21 C -0.264 4.264 22 C -0.094 4.094 23 H 0.087 0.913 24 H 0.088 0.912 25 H 0.082 0.918 26 H 0.148 0.852 27 H 0.070 0.930 28 H 0.104 0.896 29 H 0.105 0.895 30 H 0.090 0.910 31 H 0.091 0.909 32 H 0.093 0.907 33 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges -6.457 8.925 -3.107 11.446 hybrid contribution 0.250 -0.478 0.806 0.970 sum -6.206 8.447 -2.302 10.732 Atomic orbital electron populations 1.20720 0.90797 1.02725 1.02169 1.19856 0.96208 0.92446 1.00909 1.20535 0.90676 0.98530 1.03385 1.20884 0.92992 0.85530 1.10397 1.98334 1.77063 1.31871 1.97216 1.17394 0.77450 0.92491 1.05604 1.91481 1.28317 1.97131 1.93852 1.20640 0.94467 0.95100 0.94177 1.17539 0.95125 0.85475 0.93358 0.93683 1.20969 1.26817 1.02191 1.05623 0.92195 1.24948 0.94778 0.97442 0.96262 1.70039 1.28017 1.17921 1.34714 0.86563 0.78396 0.79975 0.83259 1.19737 1.21009 1.21016 1.22157 0.98813 1.00173 0.88940 1.22435 0.96965 0.94972 1.02712 1.23071 1.05652 0.97850 0.99836 1.20955 0.93085 0.97696 0.97632 0.91285 0.91202 0.91820 0.85185 0.93028 0.89643 0.89534 0.90976 0.90866 0.90651 0.84474 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.21 10.01 36.01 0.36 -0.85 16 2 C -0.09 -1.41 5.88 -104.62 -0.62 -2.03 16 3 C -0.11 -1.69 9.48 -39.56 -0.38 -2.07 16 4 C -0.07 -1.22 6.33 -39.44 -0.25 -1.47 16 5 Cl -0.07 -1.14 28.62 -51.86 -1.48 -2.63 16 6 C 0.09 1.83 7.22 -39.39 -0.28 1.54 16 7 F -0.13 -2.79 15.77 2.25 0.04 -2.75 16 8 C -0.04 -0.89 4.39 -104.56 -0.46 -1.35 16 9 C 0.10 2.47 2.08 -92.92 -0.19 2.27 16 10 H 0.05 1.21 6.88 -51.93 -0.36 0.85 16 11 C -0.52 -13.42 8.22 -34.44 -0.28 -13.70 16 12 H 0.06 1.55 7.60 -52.49 -0.40 1.15 16 13 C 0.07 1.83 5.30 -17.82 -0.09 1.73 16 14 N -0.87 -23.47 11.44 55.43 0.63 -22.83 16 15 Si 0.89 20.49 29.54 -169.99 -5.02 15.47 16 16 H -0.27 -6.22 7.11 56.52 0.40 -5.82 16 17 H -0.28 -6.49 7.11 56.52 0.40 -6.09 16 18 H -0.28 -6.61 7.11 56.52 0.40 -6.21 16 19 C -0.08 -1.83 3.87 -90.62 -0.35 -2.18 16 20 C -0.13 -2.89 9.05 -26.73 -0.24 -3.13 16 21 C -0.23 -4.46 9.87 -26.73 -0.26 -4.72 16 22 C -0.08 -1.36 8.47 -39.59 -0.34 -1.70 16 23 H 0.07 0.69 8.14 -51.93 -0.42 0.27 16 24 H 0.07 0.75 8.08 -51.93 -0.42 0.34 16 25 H 0.06 0.61 8.09 -51.93 -0.42 0.19 16 26 H 0.13 1.60 8.06 -52.49 -0.42 1.17 16 27 H 0.26 6.75 8.31 -40.82 -0.34 6.41 16 28 H 0.09 1.95 8.11 -51.93 -0.42 1.53 16 29 H 0.09 2.00 8.05 -51.93 -0.42 1.58 16 30 H 0.07 1.49 8.14 -51.93 -0.42 1.07 16 31 H 0.07 1.29 8.14 -51.93 -0.42 0.87 16 32 H 0.07 1.50 8.14 -51.93 -0.42 1.07 16 33 H 0.14 2.42 8.05 -52.49 -0.42 2.00 16 LS Contribution 300.66 15.07 4.53 4.53 Total: -1.00 -26.67 300.66 -8.80 -35.47 By element: Atomic # 1 Polarization: 4.49 SS G_CDS: -4.11 Total: 0.38 kcal Atomic # 6 Polarization: -24.25 SS G_CDS: -3.39 Total: -27.64 kcal Atomic # 7 Polarization: -23.47 SS G_CDS: 0.63 Total: -22.83 kcal Atomic # 9 Polarization: -2.79 SS G_CDS: 0.04 Total: -2.75 kcal Atomic # 14 Polarization: 20.49 SS G_CDS: -5.02 Total: 15.47 kcal Atomic # 17 Polarization: -1.14 SS G_CDS: -1.48 Total: -2.63 kcal Total LS contribution 4.53 Total: 4.53 kcal Total: -26.67 -8.80 -35.47 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260556181.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 15.955 kcal (2) G-P(sol) polarization free energy of solvation -26.675 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -10.720 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.797 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.471 kcal (6) G-S(sol) free energy of system = (1) + (5) -19.516 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.34 seconds