Wall clock time and date at job start Mon Mar 30 2020 07:06:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.38248 * 119.97249 * 2 1 4 4 C 1.38404 * 119.98838 * 179.72304 * 3 2 1 5 5 F 1.35094 * 120.03113 * 180.30047 * 4 3 2 6 6 C 1.38591 * 119.93343 * 0.55649 * 4 3 2 7 7 Cl 1.73607 * 120.02131 * 179.74251 * 6 4 3 8 8 C 1.38275 * 119.95340 * 359.46874 * 6 4 3 9 9 C 1.38213 * 119.98085 * 180.02562 * 2 1 3 10 10 C 1.50701 * 119.97206 * 359.97161 * 9 2 1 11 11 H 1.09010 * 109.46704 * 354.26594 * 10 9 2 12 12 C 1.50702 * 109.47220 * 114.26299 * 10 9 2 13 13 H 1.07993 * 119.99880 * 0.02562 * 12 10 9 14 14 C 1.37874 * 119.99996 * 180.02562 * 12 10 9 15 15 N 1.31521 * 120.00019 * 0.02562 * 14 12 10 16 16 Si 1.86798 * 120.00094 * 180.02562 * 14 12 10 17 17 H 1.48494 * 109.47184 * 59.99571 * 16 14 12 18 18 H 1.48502 * 109.47245 * 179.97438 * 16 14 12 19 19 H 1.48507 * 109.46616 * 299.99726 * 16 14 12 20 20 C 1.52994 * 109.47577 * 234.26991 * 10 9 2 21 21 C 1.52995 * 117.50311 * 128.74571 * 20 10 9 22 22 C 1.52997 * 117.50031 * 60.08287 * 20 10 9 23 23 H 1.09003 * 109.46859 * 264.33740 * 1 2 3 24 24 H 1.08990 * 109.47619 * 24.33992 * 1 2 3 25 25 H 1.08997 * 109.46727 * 144.34672 * 1 2 3 26 26 H 1.08000 * 120.00066 * 0.02562 * 3 2 1 27 27 H 1.08005 * 119.99130 * 180.23350 * 8 6 4 28 28 H 0.96994 * 119.99944 * 180.02562 * 15 14 12 29 29 H 1.09003 * 115.54701 * 274.41669 * 20 10 9 30 30 H 1.08999 * 117.49842 * 359.97438 * 21 20 10 31 31 H 1.09001 * 117.50371 * 145.02131 * 21 20 10 32 32 H 1.09002 * 117.49914 * 214.98356 * 22 20 10 33 33 H 1.08994 * 117.50387 * 0.02562 * 22 20 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1976 1.1976 0.0000 4 6 3.5817 1.1980 0.0058 5 9 4.2574 2.3678 0.0119 6 6 4.2736 -0.0028 -0.0001 7 17 6.0097 -0.0050 0.0004 8 6 3.5802 -1.1992 -0.0006 9 6 2.1976 -1.1972 -0.0005 10 6 1.4430 -2.5017 -0.0005 11 1 0.3760 -2.3041 0.1027 12 6 1.6963 -3.2286 -1.2960 13 1 2.3397 -2.7901 -2.0444 14 6 1.1067 -4.4535 -1.5259 15 7 0.3228 -4.9873 -0.6147 16 14 1.4212 -5.3549 -3.1315 17 1 2.8748 -5.6246 -3.2713 18 1 0.6775 -6.6403 -3.1315 19 1 0.9617 -4.5166 -4.2679 20 6 1.9173 -3.3652 1.1701 21 6 0.8486 -3.9442 2.0993 22 6 1.7437 -2.7996 2.5810 23 1 -0.3633 -0.1014 1.0227 24 1 -0.3634 0.9362 -0.4235 25 1 -0.3633 -0.8350 -0.5990 26 1 1.6572 2.1327 0.0004 27 1 4.1188 -2.1353 -0.0014 28 1 -0.0917 -5.8492 -0.7763 29 1 2.8003 -3.9746 0.9772 30 1 -0.1923 -3.7095 1.8770 31 1 1.0286 -4.9343 2.5182 32 1 2.5122 -3.0372 3.3166 33 1 1.2912 -1.8126 2.6755 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260680254.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:06:24 Heat of formation + Delta-G solvation = -18.114051 kcal Electronic energy + Delta-G solvation = -18274.787704 eV Core-core repulsion = 15240.995643 eV Total energy + Delta-G solvation = -3033.792061 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 268.073 amu Computer time = 0.35 seconds Orbital eigenvalues (eV) -48.56934 -39.24686 -36.58204 -36.01640 -32.82382 -32.14014 -31.01149 -27.52361 -26.21702 -23.62266 -22.18857 -21.33311 -20.70722 -19.10429 -17.00075 -16.76021 -16.01872 -15.42828 -15.36261 -14.57133 -14.16094 -13.64797 -13.42205 -13.24490 -13.07891 -12.67863 -12.36729 -12.25709 -12.01817 -11.33797 -11.01170 -10.96352 -10.88665 -10.67147 -10.58613 -10.52033 -10.05882 -9.90642 -9.78004 -8.85991 -8.83508 -8.38508 -8.38189 -7.80983 -6.08820 -4.16893 1.46658 1.63247 2.38821 3.27023 3.32054 3.35555 3.96108 4.37775 4.50307 4.99424 5.01443 5.20800 5.38423 5.58634 5.62514 5.88285 5.91489 6.01832 6.08029 6.10285 6.26608 6.38846 6.45648 6.51470 6.58765 6.67394 6.90015 6.95542 7.07050 7.16860 7.29816 7.42967 7.67437 7.86000 8.21680 8.85021 9.48209 10.96389 Molecular weight = 268.07amu Principal moments of inertia in cm(-1) A = 0.018239 B = 0.006860 C = 0.006317 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1534.841636 B = 4080.856414 C = 4431.363928 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.115 4.115 2 C -0.064 4.064 3 C -0.147 4.147 4 C 0.078 3.922 5 F -0.141 7.141 6 C -0.077 4.077 7 Cl -0.073 7.073 8 C -0.069 4.069 9 C -0.022 4.022 10 C 0.103 3.897 11 H 0.051 0.949 12 C -0.520 4.520 13 H 0.058 0.942 14 C 0.071 3.929 15 N -0.872 5.872 16 Si 0.889 3.111 17 H -0.277 1.277 18 H -0.288 1.288 19 H -0.277 1.277 20 C -0.085 4.085 21 C -0.134 4.134 22 C -0.227 4.227 23 H 0.069 0.931 24 H 0.059 0.941 25 H 0.088 0.912 26 H 0.133 0.867 27 H 0.141 0.859 28 H 0.261 0.739 29 H 0.083 0.917 30 H 0.086 0.914 31 H 0.070 0.930 32 H 0.072 0.928 33 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.439 7.817 3.120 8.763 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C -0.064 4.064 3 C -0.166 4.166 4 C 0.059 3.941 5 F -0.119 7.119 6 C -0.104 4.104 7 Cl -0.045 7.045 8 C -0.088 4.088 9 C -0.023 4.023 10 C 0.084 3.916 11 H 0.068 0.932 12 C -0.558 4.558 13 H 0.076 0.924 14 C -0.133 4.133 15 N -0.508 5.508 16 Si 0.716 3.284 17 H -0.202 1.202 18 H -0.213 1.213 19 H -0.203 1.203 20 C -0.104 4.104 21 C -0.171 4.171 22 C -0.264 4.264 23 H 0.088 0.912 24 H 0.078 0.922 25 H 0.106 0.894 26 H 0.151 0.849 27 H 0.159 0.841 28 H 0.071 0.929 29 H 0.102 0.898 30 H 0.104 0.896 31 H 0.089 0.911 32 H 0.090 0.910 33 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges 2.496 7.692 3.162 8.683 hybrid contribution 0.577 -0.410 -0.861 1.115 sum 3.073 7.282 2.300 8.232 Atomic orbital electron populations 1.20847 0.90559 1.03042 1.02653 1.19779 0.96713 0.91574 0.98371 1.20848 0.91078 0.99311 1.05377 1.17223 0.89881 0.79870 1.07167 1.91458 1.80326 1.45806 1.94347 1.20979 0.84459 0.94270 1.10691 1.98335 1.09968 1.98942 1.97207 1.20895 0.94245 0.95768 0.97873 1.20478 0.92629 0.96712 0.92474 1.17658 0.94786 0.85528 0.93586 0.93156 1.20915 1.30385 1.03784 1.00682 0.92426 1.24918 0.94810 0.97155 0.96368 1.70002 1.30042 1.17572 1.33208 0.86714 0.78466 0.79017 0.84175 1.20241 1.21322 1.20264 1.22210 0.99444 1.00390 0.88340 1.22439 0.96668 0.94967 1.03062 1.23078 1.04548 0.98347 1.00400 0.91232 0.92244 0.89373 0.84897 0.84095 0.92925 0.89839 0.89553 0.91101 0.90985 0.90531 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.74 9.14 36.00 0.33 -1.41 16 2 C -0.06 -1.11 5.88 -104.63 -0.62 -1.72 16 3 C -0.15 -2.34 9.66 -39.52 -0.38 -2.73 16 4 C 0.08 1.34 7.28 -39.39 -0.29 1.05 16 5 F -0.14 -2.34 16.84 2.25 0.04 -2.30 16 6 C -0.08 -1.35 6.33 -39.44 -0.25 -1.60 16 7 Cl -0.07 -1.18 28.62 -51.86 -1.48 -2.66 16 8 C -0.07 -1.30 8.75 -39.56 -0.35 -1.65 16 9 C -0.02 -0.44 4.38 -104.62 -0.46 -0.89 16 10 C 0.10 2.25 1.83 -92.93 -0.17 2.08 16 11 H 0.05 1.16 5.47 -51.92 -0.28 0.88 16 12 C -0.52 -12.90 8.30 -34.44 -0.29 -13.18 16 13 H 0.06 1.46 7.73 -52.49 -0.41 1.05 16 14 C 0.07 1.81 5.30 -17.82 -0.09 1.71 16 15 N -0.87 -22.50 11.43 55.43 0.63 -21.87 16 16 Si 0.89 20.12 29.54 -169.99 -5.02 15.09 16 17 H -0.28 -6.29 7.11 56.52 0.40 -5.89 16 18 H -0.29 -6.52 7.11 56.52 0.40 -6.12 16 19 H -0.28 -6.29 7.11 56.52 0.40 -5.89 16 20 C -0.09 -1.81 3.63 -90.63 -0.33 -2.14 16 21 C -0.13 -2.73 9.04 -26.70 -0.24 -2.97 16 22 C -0.23 -4.20 9.87 -26.70 -0.26 -4.47 16 23 H 0.07 0.98 8.14 -51.93 -0.42 0.55 16 24 H 0.06 0.75 8.05 -51.93 -0.42 0.33 16 25 H 0.09 1.50 6.54 -51.93 -0.34 1.16 16 26 H 0.13 1.75 8.06 -52.49 -0.42 1.33 16 27 H 0.14 2.69 7.91 -52.48 -0.42 2.27 16 28 H 0.26 6.58 8.31 -40.82 -0.34 6.24 16 29 H 0.08 1.89 8.11 -51.93 -0.42 1.47 16 30 H 0.09 1.83 8.05 -51.93 -0.42 1.42 16 31 H 0.07 1.41 8.14 -51.93 -0.42 0.99 16 32 H 0.07 1.24 8.14 -51.93 -0.42 0.82 16 33 H 0.08 1.38 8.14 -51.93 -0.42 0.96 16 LS Contribution 297.92 15.07 4.49 4.49 Total: -1.00 -24.91 297.92 -8.69 -33.60 By element: Atomic # 1 Polarization: 5.52 SS G_CDS: -3.95 Total: 1.57 kcal Atomic # 6 Polarization: -24.53 SS G_CDS: -3.39 Total: -27.92 kcal Atomic # 7 Polarization: -22.50 SS G_CDS: 0.63 Total: -21.87 kcal Atomic # 9 Polarization: -2.34 SS G_CDS: 0.04 Total: -2.30 kcal Atomic # 14 Polarization: 20.12 SS G_CDS: -5.02 Total: 15.09 kcal Atomic # 17 Polarization: -1.18 SS G_CDS: -1.48 Total: -2.66 kcal Total LS contribution 4.49 Total: 4.49 kcal Total: -24.91 -8.69 -33.60 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260680254.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 15.486 kcal (2) G-P(sol) polarization free energy of solvation -24.914 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -9.428 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.686 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.600 kcal (6) G-S(sol) free energy of system = (1) + (5) -18.114 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.35 seconds