Wall clock time and date at job start Mon Mar 30 2020 07:06:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.38208 * 119.99598 * 2 1 4 4 C 1.38434 * 119.99295 * 179.97438 * 3 2 1 5 5 F 1.35093 * 120.01582 * 180.02562 * 4 3 2 6 6 C 1.38481 * 119.97006 * 0.02562 * 4 3 2 7 7 C 1.50697 * 120.00182 * 180.02562 * 6 4 3 8 8 H 1.09000 * 109.47374 * 359.97438 * 7 6 4 9 9 C 1.50706 * 109.47178 * 119.99930 * 7 6 4 10 10 H 1.07998 * 119.99629 * 359.97438 * 9 7 6 11 11 C 1.37875 * 119.99955 * 180.02562 * 9 7 6 12 12 N 1.31515 * 119.99932 * 359.97438 * 11 9 7 13 13 Si 1.86800 * 119.99908 * 179.97438 * 11 9 7 14 14 H 1.48500 * 109.47233 * 359.97438 * 13 11 9 15 15 H 1.48501 * 109.47364 * 119.99503 * 13 11 9 16 16 H 1.48500 * 109.46997 * 239.99827 * 13 11 9 17 17 C 1.53002 * 109.46783 * 239.99515 * 7 6 4 18 18 C 1.53001 * 117.49694 * 128.75221 * 17 7 6 19 19 C 1.52996 * 117.49903 * 60.09074 * 17 7 6 20 20 C 1.38167 * 119.98805 * 0.26919 * 6 4 3 21 21 C 1.38329 * 119.99386 * 180.02562 * 2 1 3 22 22 Cl 1.73600 * 119.98940 * 0.02562 * 21 2 1 23 23 H 1.08999 * 109.46696 * 90.00276 * 1 2 3 24 24 H 1.09001 * 109.46949 * 210.00311 * 1 2 3 25 25 H 1.09001 * 109.47246 * 330.00506 * 1 2 3 26 26 H 1.08007 * 120.00223 * 0.02562 * 3 2 1 27 27 H 0.97003 * 119.99476 * 180.02562 * 12 11 9 28 28 H 1.09001 * 115.55063 * 274.41729 * 17 7 6 29 29 H 1.08997 * 117.50137 * 359.97438 * 18 17 7 30 30 H 1.09006 * 117.50251 * 145.02076 * 18 17 7 31 31 H 1.09005 * 117.49800 * 214.97730 * 19 17 7 32 32 H 1.08995 * 117.49944 * 0.02562 * 19 17 7 33 33 H 1.08004 * 119.99150 * 179.70831 * 20 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1980 1.1970 0.0000 4 6 3.5823 1.1969 0.0005 5 9 4.2582 2.3666 0.0011 6 6 4.2741 -0.0028 0.0005 7 6 5.7810 -0.0037 0.0017 8 1 6.1450 1.0237 0.0020 9 6 6.2820 -0.7150 1.2323 10 1 5.5794 -1.1249 1.9426 11 6 7.6373 -0.8414 1.4517 12 7 8.4929 -0.3417 0.5869 13 14 8.2582 -1.7224 2.9774 14 1 7.1024 -2.1883 3.7849 15 1 9.0832 -2.8894 2.5739 16 1 9.0828 -0.7894 3.7866 17 6 6.2915 -0.7248 -1.2474 18 6 7.3290 0.0000 -2.1072 19 6 5.8903 -0.1511 -2.6079 20 6 3.5823 -1.1988 -0.0056 21 6 2.1986 -1.1980 -0.0005 22 17 1.3301 -2.7012 -0.0019 23 1 -0.3633 0.0000 -1.0277 24 1 -0.3633 -0.8900 0.5139 25 1 -0.3634 0.8900 0.5138 26 1 1.6579 2.1323 0.0004 27 1 9.4464 -0.4310 0.7411 28 1 6.3760 -1.8083 -1.1633 29 1 7.6476 0.9907 -1.7832 30 1 8.0958 -0.6066 -2.5890 31 1 5.7113 -0.8572 -3.4188 32 1 5.2631 0.7403 -2.6130 33 1 4.1217 -2.1345 -0.0104 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260814110.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:06:39 Heat of formation + Delta-G solvation = -19.986578 kcal Electronic energy + Delta-G solvation = -18274.559377 eV Core-core repulsion = 15240.686118 eV Total energy + Delta-G solvation = -3033.873260 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 268.073 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -48.30700 -39.06806 -36.74111 -35.95609 -33.14154 -32.24640 -29.88942 -28.92258 -25.73904 -23.17542 -22.50270 -21.30604 -20.87495 -19.10815 -16.77969 -16.54126 -15.98463 -15.72802 -15.03711 -14.56446 -14.10951 -13.73783 -13.66151 -13.27994 -13.06643 -12.71148 -12.36698 -12.15239 -11.79352 -11.58376 -11.19760 -11.01379 -10.94560 -10.69465 -10.51043 -10.45743 -10.14819 -9.86741 -9.75155 -8.85453 -8.80597 -8.37514 -8.33962 -7.83604 -6.05452 -4.13631 1.46719 1.63880 2.43939 3.26554 3.35377 3.39325 3.93071 4.39707 4.67944 5.00151 5.05026 5.10441 5.24998 5.51073 5.60062 5.67727 5.79362 5.92770 5.92893 6.13321 6.19086 6.29387 6.34016 6.48356 6.61259 6.69630 6.77533 6.93106 7.08533 7.19802 7.31080 7.42403 7.69378 7.89008 8.23354 8.88181 9.51118 11.00322 Molecular weight = 268.07amu Principal moments of inertia in cm(-1) A = 0.017778 B = 0.007110 C = 0.006327 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1574.602179 B = 3937.167241 C = 4424.752505 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.111 4.111 2 C -0.079 4.079 3 C -0.150 4.150 4 C 0.094 3.906 5 F -0.136 7.136 6 C -0.051 4.051 7 C 0.104 3.896 8 H 0.046 0.954 9 C -0.519 4.519 10 H 0.060 0.940 11 C 0.070 3.930 12 N -0.871 5.871 13 Si 0.890 3.110 14 H -0.272 1.272 15 H -0.284 1.284 16 H -0.284 1.284 17 C -0.083 4.083 18 C -0.134 4.134 19 C -0.227 4.227 20 C -0.067 4.067 21 C -0.048 4.048 22 Cl -0.081 7.081 23 H 0.070 0.930 24 H 0.071 0.929 25 H 0.066 0.934 26 H 0.133 0.867 27 H 0.260 0.740 28 H 0.085 0.915 29 H 0.086 0.914 30 H 0.072 0.928 31 H 0.073 0.927 32 H 0.075 0.925 33 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.744 -0.078 -3.065 12.137 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.168 4.168 2 C -0.080 4.080 3 C -0.169 4.169 4 C 0.075 3.925 5 F -0.115 7.115 6 C -0.052 4.052 7 C 0.086 3.914 8 H 0.064 0.936 9 C -0.556 4.556 10 H 0.078 0.922 11 C -0.134 4.134 12 N -0.508 5.508 13 Si 0.717 3.283 14 H -0.197 1.197 15 H -0.210 1.210 16 H -0.210 1.210 17 C -0.102 4.102 18 C -0.171 4.171 19 C -0.264 4.264 20 C -0.085 4.085 21 C -0.075 4.075 22 Cl -0.053 7.053 23 H 0.089 0.911 24 H 0.090 0.910 25 H 0.085 0.915 26 H 0.151 0.849 27 H 0.070 0.930 28 H 0.103 0.897 29 H 0.105 0.895 30 H 0.090 0.910 31 H 0.091 0.909 32 H 0.093 0.907 33 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges -11.595 -0.141 -3.100 12.003 hybrid contribution 0.610 -0.394 0.803 1.082 sum -10.985 -0.535 -2.297 11.235 Atomic orbital electron populations 1.20772 0.90481 1.03036 1.02464 1.19288 0.96202 0.90664 1.01851 1.20759 0.92201 0.98201 1.05721 1.17699 0.89491 0.81727 1.03620 1.91463 1.80419 1.45747 1.93838 1.20588 0.99704 0.89928 0.94961 1.17530 0.82717 0.97867 0.93313 0.93605 1.20988 0.91675 1.37359 1.05627 0.92204 1.24941 0.96872 0.95307 0.96270 1.70037 1.01913 1.44095 1.34717 0.86568 0.78942 0.79463 0.83278 1.19703 1.20991 1.21015 1.22176 1.00897 0.98144 0.88997 1.22446 0.89874 1.02028 1.02716 1.23078 1.00395 1.03062 0.99862 1.20833 0.90552 0.99397 0.97757 1.20796 0.92418 0.85953 1.08307 1.98316 1.76944 1.32884 1.97117 0.91092 0.90999 0.91492 0.84912 0.93035 0.89660 0.89526 0.90987 0.90863 0.90657 0.84009 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.26 9.61 36.01 0.35 -0.91 16 2 C -0.08 -1.19 5.88 -104.60 -0.62 -1.80 16 3 C -0.15 -2.38 9.68 -39.52 -0.38 -2.76 16 4 C 0.09 1.81 7.25 -39.42 -0.29 1.53 16 5 F -0.14 -2.77 16.19 2.25 0.04 -2.73 16 6 C -0.05 -1.05 4.39 -104.56 -0.46 -1.51 16 7 C 0.10 2.49 2.08 -92.92 -0.19 2.29 16 8 H 0.05 1.22 6.88 -51.93 -0.36 0.86 16 9 C -0.52 -13.54 8.23 -34.44 -0.28 -13.83 16 10 H 0.06 1.57 7.61 -52.49 -0.40 1.17 16 11 C 0.07 1.85 5.30 -17.82 -0.09 1.75 16 12 N -0.87 -23.58 11.43 55.43 0.63 -22.95 16 13 Si 0.89 20.68 29.54 -169.99 -5.02 15.66 16 14 H -0.27 -6.30 7.11 56.52 0.40 -5.90 16 15 H -0.28 -6.57 7.11 56.52 0.40 -6.17 16 16 H -0.28 -6.63 7.11 56.52 0.40 -6.23 16 17 C -0.08 -1.88 3.86 -90.62 -0.35 -2.23 16 18 C -0.13 -2.89 9.04 -26.69 -0.24 -3.13 16 19 C -0.23 -4.47 9.87 -26.69 -0.26 -4.73 16 20 C -0.07 -1.26 8.61 -39.56 -0.34 -1.60 16 21 C -0.05 -0.79 6.31 -39.50 -0.25 -1.04 16 22 Cl -0.08 -1.17 27.29 -51.86 -1.42 -2.58 16 23 H 0.07 0.72 8.14 -51.93 -0.42 0.30 16 24 H 0.07 0.79 6.90 -51.93 -0.36 0.44 16 25 H 0.07 0.65 8.09 -51.93 -0.42 0.23 16 26 H 0.13 1.74 8.06 -52.48 -0.42 1.32 16 27 H 0.26 6.77 8.31 -40.82 -0.34 6.43 16 28 H 0.09 1.99 8.11 -51.93 -0.42 1.57 16 29 H 0.09 1.99 8.05 -51.93 -0.42 1.57 16 30 H 0.07 1.50 8.14 -51.93 -0.42 1.07 16 31 H 0.07 1.31 8.14 -51.93 -0.42 0.88 16 32 H 0.07 1.48 8.14 -51.93 -0.42 1.05 16 33 H 0.14 2.72 8.05 -52.48 -0.42 2.29 16 LS Contribution 298.52 15.07 4.50 4.50 Total: -1.00 -26.46 298.52 -8.73 -35.18 By element: Atomic # 1 Polarization: 4.94 SS G_CDS: -4.05 Total: 0.90 kcal Atomic # 6 Polarization: -24.57 SS G_CDS: -3.41 Total: -27.98 kcal Atomic # 7 Polarization: -23.58 SS G_CDS: 0.63 Total: -22.95 kcal Atomic # 9 Polarization: -2.77 SS G_CDS: 0.04 Total: -2.73 kcal Atomic # 14 Polarization: 20.68 SS G_CDS: -5.02 Total: 15.66 kcal Atomic # 17 Polarization: -1.17 SS G_CDS: -1.42 Total: -2.58 kcal Total LS contribution 4.50 Total: 4.50 kcal Total: -26.46 -8.73 -35.18 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260814110.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 15.196 kcal (2) G-P(sol) polarization free energy of solvation -26.457 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -11.261 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.725 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.183 kcal (6) G-S(sol) free energy of system = (1) + (5) -19.987 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.34 seconds