Wall clock time and date at job start Mon Mar 30 2020 07:16:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 C 1.53001 * 109.47258 * 2 1 4 4 H 1.08998 * 109.46991 * 305.54790 * 3 2 1 5 5 C 1.50703 * 109.46993 * 185.55161 * 3 2 1 6 6 H 1.07999 * 119.99715 * 245.60397 * 5 3 2 7 7 C 1.37879 * 120.00117 * 65.60375 * 5 3 2 8 8 N 1.31512 * 119.99978 * 196.28070 * 7 5 3 9 9 Si 1.86805 * 119.99966 * 16.28830 * 7 5 3 10 10 H 1.48497 * 109.46898 * 179.97438 * 9 7 5 11 11 H 1.48506 * 109.46960 * 299.99810 * 9 7 5 12 12 H 1.48499 * 109.47283 * 59.99520 * 9 7 5 13 13 N 1.46499 * 109.47140 * 65.55383 * 3 2 1 14 14 C 1.34781 * 119.99694 * 275.00048 * 13 3 2 15 15 O 1.21551 * 120.00255 * 359.97438 * 14 13 3 16 16 C 1.47840 * 119.99703 * 180.02562 * 14 13 3 17 17 C 1.39559 * 120.55495 * 359.71927 * 16 14 13 18 18 N 1.31664 * 120.59076 * 179.73293 * 17 16 14 19 19 C 1.31944 * 121.89980 * 0.57884 * 18 17 16 20 20 C 1.38426 * 121.05748 * 359.68689 * 19 18 17 21 21 Cl 1.73599 * 120.35998 * 179.97438 * 20 19 18 22 22 C 1.38509 * 119.28192 * 0.02562 * 20 19 18 23 23 H 1.09006 * 109.47148 * 60.00076 * 1 2 3 24 24 H 1.08996 * 109.47553 * 179.97438 * 1 2 3 25 25 H 1.08999 * 109.47111 * 300.00221 * 1 2 3 26 26 H 1.08999 * 109.47111 * 239.99779 * 2 1 3 27 27 H 1.09000 * 109.47249 * 120.00370 * 2 1 3 28 28 H 0.96993 * 120.00160 * 354.84026 * 8 7 5 29 29 H 0.96993 * 120.00114 * 95.00036 * 13 3 2 30 30 H 1.07993 * 119.70303 * 0.02562 * 17 16 14 31 31 H 1.07999 * 119.47000 * 179.70530 * 19 18 17 32 32 H 1.08001 * 120.86675 * 180.02562 * 22 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 1 1.5978 1.9842 -0.8361 5 6 3.5407 1.4446 -0.1375 6 1 4.1567 1.8041 0.6736 7 6 4.1273 0.9878 -1.2986 8 7 5.4073 0.6860 -1.3140 9 14 3.1041 0.7977 -2.8498 10 1 3.9637 0.2944 -3.9512 11 1 2.0024 -0.1666 -2.6010 12 1 2.5328 2.1144 -3.2305 13 7 1.6639 2.0934 1.2574 14 6 0.4476 2.6600 1.3854 15 8 -0.3370 2.6312 0.4575 16 6 0.0683 3.3174 2.6541 17 6 0.9583 3.3530 3.7285 18 7 0.6231 3.9428 4.8569 19 6 -0.5569 4.5089 5.0241 20 6 -1.4979 4.5118 4.0088 21 17 -3.0452 5.2613 4.2487 22 6 -1.1918 3.9092 2.7998 23 1 -0.3634 0.5138 -0.8900 24 1 -0.3634 -1.0276 -0.0005 25 1 -0.3633 0.5139 0.8900 26 1 1.8933 -0.5139 -0.8900 27 1 1.8933 -0.5139 0.8899 28 1 5.9549 0.8550 -0.5315 29 1 2.2901 2.1167 1.9977 30 1 1.9323 2.8967 3.6318 31 1 -0.7924 4.9777 5.9681 32 1 -1.9065 3.8969 1.9902 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000295053225.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:16:49 Heat of formation + Delta-G solvation = -15.036366 kcal Electronic energy + Delta-G solvation = -17895.226053 eV Core-core repulsion = 14881.487412 eV Total energy + Delta-G solvation = -3013.738641 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 268.072 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -40.70049 -38.92925 -36.91964 -35.44996 -32.86494 -32.59424 -31.93490 -30.75319 -27.38393 -24.72400 -23.80002 -22.39820 -21.01015 -19.77458 -18.48723 -17.45820 -16.99753 -16.52562 -15.47801 -15.34000 -15.03802 -14.34140 -13.87792 -13.49266 -13.30554 -12.88384 -12.66736 -12.55139 -12.40554 -12.26691 -11.82272 -11.52063 -10.99081 -10.78449 -10.50535 -10.19549 -10.02715 -9.94823 -9.65343 -9.37508 -9.24984 -9.11865 -8.41031 -8.25841 -6.64454 -4.29358 0.38970 0.78351 1.69027 2.94363 3.33811 3.40647 3.53059 3.64982 3.74008 4.06258 4.36372 4.40968 4.59115 4.78269 4.88880 5.10274 5.20583 5.61789 5.77068 5.99440 6.02587 6.09585 6.19359 6.59990 6.72016 6.83564 6.94691 7.21900 7.28462 7.47107 7.52883 8.15669 8.27225 8.56584 8.77888 9.40107 10.76628 Molecular weight = 268.07amu Principal moments of inertia in cm(-1) A = 0.033924 B = 0.004629 C = 0.004327 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 825.167994 B = 6047.451659 C = 6468.804214 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.145 4.145 2 C -0.140 4.140 3 C 0.247 3.753 4 H 0.045 0.955 5 C -0.620 4.620 6 H 0.063 0.937 7 C 0.041 3.959 8 N -0.896 5.896 9 Si 1.039 2.961 10 H -0.283 1.283 11 H -0.268 1.268 12 H -0.280 1.280 13 N -0.689 5.689 14 C 0.547 3.453 15 O -0.538 6.538 16 C -0.160 4.160 17 C 0.135 3.865 18 N -0.471 5.471 19 C 0.127 3.873 20 C -0.098 4.098 21 Cl -0.052 7.052 22 C -0.013 4.013 23 H 0.052 0.948 24 H 0.032 0.968 25 H 0.046 0.954 26 H 0.071 0.929 27 H 0.052 0.948 28 H 0.270 0.730 29 H 0.393 0.607 30 H 0.169 0.831 31 H 0.168 0.832 32 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.614 5.902 11.057 17.783 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.202 4.202 2 C -0.179 4.179 3 C 0.144 3.856 4 H 0.062 0.938 5 C -0.658 4.658 6 H 0.081 0.919 7 C -0.166 4.166 8 N -0.529 5.529 9 Si 0.867 3.133 10 H -0.208 1.208 11 H -0.194 1.194 12 H -0.206 1.206 13 N -0.337 5.337 14 C 0.331 3.669 15 O -0.418 6.418 16 C -0.166 4.166 17 C -0.023 4.023 18 N -0.179 5.179 19 C -0.031 4.031 20 C -0.127 4.127 21 Cl -0.024 7.024 22 C -0.040 4.040 23 H 0.071 0.929 24 H 0.051 0.949 25 H 0.066 0.934 26 H 0.090 0.910 27 H 0.071 0.929 28 H 0.080 0.920 29 H 0.227 0.773 30 H 0.186 0.814 31 H 0.185 0.815 32 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges -12.578 5.411 9.492 16.661 hybrid contribution -0.422 0.643 1.404 1.601 sum -13.000 6.055 10.897 18.011 Atomic orbital electron populations 1.21894 0.97369 0.99060 1.01881 1.22375 0.93808 0.99584 1.02115 1.19148 0.96068 0.88652 0.81735 0.93763 1.22071 0.89463 1.49901 1.04321 0.91929 1.25672 0.97524 0.92266 1.01154 1.70873 1.07051 1.40592 1.34342 0.84129 0.75533 0.77760 0.75912 1.20842 1.19439 1.20569 1.46237 1.13916 1.55106 1.18439 1.17874 0.83244 0.79471 0.86281 1.90761 1.50885 1.59936 1.40189 1.21356 0.95517 1.02507 0.97215 1.23229 0.99158 0.92713 0.87228 1.67859 1.17228 1.08822 1.23957 1.22969 0.87668 0.94439 0.98027 1.22005 0.90276 1.03301 0.97135 1.98386 1.26665 1.80454 1.96846 1.21689 0.95804 0.90627 0.95924 0.92924 0.94903 0.93450 0.91039 0.92912 0.92016 0.77292 0.81396 0.81491 0.82439 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.81 8.53 37.15 0.32 -2.49 16 2 C -0.14 -3.00 5.27 -26.73 -0.14 -3.14 16 3 C 0.25 5.62 1.82 -69.08 -0.13 5.49 16 4 H 0.04 1.10 6.25 -51.93 -0.32 0.77 16 5 C -0.62 -16.08 9.01 -34.44 -0.31 -16.39 16 6 H 0.06 1.69 7.96 -52.49 -0.42 1.27 16 7 C 0.04 1.11 5.32 -17.82 -0.09 1.02 16 8 N -0.90 -26.02 13.70 55.43 0.76 -25.26 16 9 Si 1.04 24.34 26.27 -169.99 -4.47 19.87 16 10 H -0.28 -6.65 7.11 56.52 0.40 -6.24 16 11 H -0.27 -5.84 5.67 56.52 0.32 -5.52 16 12 H -0.28 -6.41 7.11 56.52 0.40 -6.01 16 13 N -0.69 -13.06 4.98 -55.88 -0.28 -13.34 16 14 C 0.55 9.86 6.37 -12.33 -0.08 9.78 16 15 O -0.54 -11.17 13.56 5.32 0.07 -11.09 16 16 C -0.16 -2.31 5.89 -104.83 -0.62 -2.93 16 17 C 0.13 1.73 10.71 -17.13 -0.18 1.55 16 18 N -0.47 -5.83 10.34 -12.89 -0.13 -5.97 16 19 C 0.13 1.35 10.97 -17.43 -0.19 1.15 16 20 C -0.10 -1.09 6.34 -39.41 -0.25 -1.34 16 21 Cl -0.05 -0.50 28.98 -51.86 -1.50 -2.01 16 22 C -0.01 -0.17 9.52 -38.83 -0.37 -0.54 16 23 H 0.05 1.06 7.88 -51.93 -0.41 0.65 16 24 H 0.03 0.56 8.14 -51.93 -0.42 0.14 16 25 H 0.05 0.91 5.63 -51.93 -0.29 0.61 16 26 H 0.07 1.60 4.74 -51.93 -0.25 1.36 16 27 H 0.05 1.09 8.14 -51.93 -0.42 0.67 16 28 H 0.27 7.74 8.73 -40.82 -0.36 7.38 16 29 H 0.39 6.51 6.59 -40.82 -0.27 6.24 16 30 H 0.17 1.89 6.42 -52.49 -0.34 1.55 16 31 H 0.17 1.28 8.06 -52.49 -0.42 0.85 16 32 H 0.16 2.03 7.74 -52.49 -0.41 1.62 16 LS Contribution 283.74 15.07 4.28 4.28 Total: -1.00 -29.49 283.74 -6.52 -36.01 By element: Atomic # 1 Polarization: 8.55 SS G_CDS: -3.20 Total: 5.35 kcal Atomic # 6 Polarization: -5.80 SS G_CDS: -2.04 Total: -7.84 kcal Atomic # 7 Polarization: -44.91 SS G_CDS: 0.35 Total: -44.56 kcal Atomic # 8 Polarization: -11.17 SS G_CDS: 0.07 Total: -11.09 kcal Atomic # 14 Polarization: 24.34 SS G_CDS: -4.47 Total: 19.87 kcal Atomic # 17 Polarization: -0.50 SS G_CDS: -1.50 Total: -2.01 kcal Total LS contribution 4.28 Total: 4.28 kcal Total: -29.49 -6.52 -36.01 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000295053225.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 20.975 kcal (2) G-P(sol) polarization free energy of solvation -29.489 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -8.514 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.522 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.011 kcal (6) G-S(sol) free energy of system = (1) + (5) -15.036 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds