Wall clock time and date at job start Mon Mar 30 2020 07:24:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53010 * 1 3 3 N 1.46507 * 109.46833 * 2 1 4 4 C 1.46499 * 120.00129 * 278.18394 * 3 2 1 5 5 C 1.50708 * 109.46759 * 270.00018 * 4 3 2 6 6 H 1.07995 * 120.00000 * 0.02562 * 5 4 3 7 7 C 1.37872 * 119.99732 * 180.02562 * 5 4 3 8 8 N 1.31518 * 119.99945 * 180.02562 * 7 5 4 9 9 Si 1.86803 * 120.00186 * 359.97438 * 7 5 4 10 10 H 1.48505 * 109.47142 * 89.99982 * 9 7 5 11 11 H 1.48497 * 109.47294 * 209.99874 * 9 7 5 12 12 H 1.48502 * 109.47010 * 330.00046 * 9 7 5 13 13 C 1.34775 * 119.99437 * 98.18193 * 3 2 1 14 14 O 1.21551 * 119.99537 * 186.15140 * 13 3 2 15 15 C 1.47842 * 120.00330 * 6.15482 * 13 3 2 16 16 C 1.39560 * 120.55416 * 330.77603 * 15 13 3 17 17 N 1.31656 * 120.59789 * 180.02562 * 16 15 13 18 18 C 1.31947 * 121.89549 * 0.02562 * 17 16 15 19 19 C 1.38434 * 121.06002 * 359.97438 * 18 17 16 20 20 Cl 1.73602 * 120.35992 * 179.97438 * 19 18 17 21 21 C 1.38512 * 119.27512 * 0.02562 * 19 18 17 22 22 H 1.08999 * 109.46732 * 59.99321 * 1 2 3 23 23 H 1.08997 * 109.46947 * 179.97438 * 1 2 3 24 24 H 1.08996 * 109.47000 * 299.99669 * 1 2 3 25 25 H 1.09004 * 109.46687 * 240.00389 * 2 1 3 26 26 H 1.08992 * 109.46981 * 120.00387 * 2 1 3 27 27 H 1.08994 * 109.47390 * 29.99686 * 4 3 2 28 28 H 1.08997 * 109.46841 * 150.00386 * 4 3 2 29 29 H 0.97003 * 119.99739 * 180.02562 * 8 7 5 30 30 H 1.07999 * 119.70282 * 0.05005 * 16 15 13 31 31 H 1.08001 * 119.47246 * 180.02562 * 18 17 16 32 32 H 1.08008 * 120.85829 * 179.97438 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 7 2.0184 1.3813 0.0000 4 6 2.0923 2.1321 -1.2558 5 6 3.4436 1.9208 -1.8886 6 1 4.1741 1.2900 -1.4040 7 6 3.7473 2.5328 -3.0861 8 7 4.9264 2.3480 -3.6387 9 14 2.4835 3.6234 -3.9246 10 1 2.6463 5.0223 -3.4534 11 1 2.6818 3.5703 -5.3954 12 1 1.1178 3.1446 -3.5916 13 6 2.3996 1.9612 1.1554 14 8 2.6981 3.1393 1.1744 15 6 2.4547 1.1644 2.3995 16 6 1.6029 0.0741 2.5820 17 7 1.6509 -0.6358 3.6898 18 6 2.4945 -0.3518 4.6637 19 6 3.3725 0.7135 4.5603 20 17 4.4744 1.0712 5.8532 21 6 3.3614 1.4915 3.4144 22 1 -0.3633 0.5139 -0.8899 23 1 -0.3633 -1.0276 -0.0005 24 1 -0.3633 0.5138 0.8900 25 1 1.8934 -0.5138 -0.8901 26 1 1.8934 -0.5139 0.8899 27 1 1.3145 1.7823 -1.9346 28 1 1.9477 3.1934 -1.0536 29 1 5.1401 2.7790 -4.4810 30 1 0.8981 -0.1900 1.8074 31 1 2.5008 -0.9608 5.5557 32 1 4.0349 2.3290 3.3068 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000307953337.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:24:48 Heat of formation + Delta-G solvation = 25.008002 kcal Electronic energy + Delta-G solvation = -18045.631175 eV Core-core repulsion = 15033.628988 eV Total energy + Delta-G solvation = -3012.002187 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 268.072 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -40.87575 -38.77170 -36.83034 -35.88622 -33.06305 -32.53681 -31.51667 -30.39287 -27.97987 -24.71500 -23.92110 -23.02710 -22.19048 -19.29709 -17.66913 -17.25919 -17.02225 -16.67639 -15.43054 -15.30941 -14.65283 -14.32476 -14.06766 -13.78362 -13.33395 -13.22992 -12.60894 -12.40654 -12.23647 -12.15290 -11.93785 -11.54912 -11.40440 -11.06586 -10.81528 -10.57911 -10.26379 -10.05901 -9.91714 -9.61578 -9.27217 -9.01028 -8.65553 -7.91427 -6.15344 -4.15534 0.51820 0.88072 1.79009 3.03543 3.24541 3.30265 3.32504 3.47464 3.74727 4.17803 4.33574 4.49891 4.55275 4.67737 5.00069 5.03968 5.16532 5.23293 5.32363 5.50897 5.66181 5.78775 5.85570 6.03226 6.18068 6.29107 6.59767 6.84158 7.14231 7.51444 7.55533 8.00420 8.36966 8.67872 8.87413 9.43806 10.97760 Molecular weight = 268.07amu Principal moments of inertia in cm(-1) A = 0.026099 B = 0.005190 C = 0.004639 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1072.574751 B = 5393.414723 C = 6033.931598 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.181 4.181 2 C 0.073 3.927 3 N -0.579 5.579 4 C 0.216 3.784 5 C -0.534 4.534 6 H 0.075 0.925 7 C 0.074 3.926 8 N -0.895 5.895 9 Si 0.876 3.124 10 H -0.273 1.273 11 H -0.284 1.284 12 H -0.265 1.265 13 C 0.554 3.446 14 O -0.529 6.529 15 C -0.157 4.157 16 C 0.098 3.902 17 N -0.472 5.472 18 C 0.123 3.877 19 C -0.097 4.097 20 Cl -0.053 7.053 21 C -0.014 4.014 22 H 0.071 0.929 23 H 0.071 0.929 24 H 0.058 0.942 25 H 0.090 0.910 26 H 0.090 0.910 27 H 0.035 0.965 28 H 0.041 0.959 29 H 0.266 0.734 30 H 0.199 0.801 31 H 0.167 0.833 32 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.401 -6.735 14.486 17.606 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.239 4.239 2 C -0.051 4.051 3 N -0.309 5.309 4 C 0.096 3.904 5 C -0.573 4.573 6 H 0.093 0.907 7 C -0.128 4.128 8 N -0.533 5.533 9 Si 0.703 3.297 10 H -0.198 1.198 11 H -0.210 1.210 12 H -0.190 1.190 13 C 0.340 3.660 14 O -0.407 6.407 15 C -0.162 4.162 16 C -0.058 4.058 17 N -0.181 5.181 18 C -0.035 4.035 19 C -0.126 4.126 20 Cl -0.024 7.024 21 C -0.041 4.041 22 H 0.090 0.910 23 H 0.090 0.910 24 H 0.077 0.923 25 H 0.109 0.891 26 H 0.108 0.892 27 H 0.053 0.947 28 H 0.059 0.941 29 H 0.076 0.924 30 H 0.215 0.785 31 H 0.184 0.816 32 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges -7.601 -6.727 14.491 17.693 hybrid contribution 0.318 1.277 -0.560 1.430 sum -7.282 -5.451 13.931 16.638 Atomic orbital electron populations 1.22333 0.96085 1.02557 1.02952 1.22277 0.93926 0.84309 1.04556 1.47824 1.61793 1.13360 1.07947 1.19746 0.98149 0.92648 0.79902 1.21298 0.98584 1.31180 1.06220 0.90689 1.24843 0.95300 0.95906 0.96790 1.69894 1.20792 1.43783 1.18817 0.86852 0.82140 0.81822 0.78899 1.19819 1.20980 1.18994 1.17814 0.78662 0.86847 0.82687 1.90772 1.48969 1.15422 1.85493 1.21282 0.99294 0.98652 0.97002 1.24551 0.97184 0.89327 0.94743 1.67959 1.20447 1.28871 1.00797 1.22963 0.89497 0.93141 0.97884 1.21969 0.97993 1.00167 0.92467 1.98383 1.61602 1.94423 1.48001 1.21664 0.95721 0.97256 0.89467 0.91042 0.90993 0.92285 0.89146 0.89216 0.94734 0.94111 0.92440 0.78469 0.81587 0.82637 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -2.11 9.13 37.16 0.34 -1.77 16 2 C 0.07 1.08 5.58 -4.03 -0.02 1.06 16 3 N -0.58 -11.46 2.46 -176.17 -0.43 -11.89 16 4 C 0.22 5.07 4.29 -5.19 -0.02 5.04 16 5 C -0.53 -14.93 9.94 -34.44 -0.34 -15.27 16 6 H 0.08 2.30 8.06 -52.49 -0.42 1.88 16 7 C 0.07 2.12 5.47 -17.82 -0.10 2.02 16 8 N -0.89 -27.09 13.96 55.43 0.77 -26.32 16 9 Si 0.88 21.01 27.47 -169.99 -4.67 16.34 16 10 H -0.27 -6.60 7.11 56.52 0.40 -6.20 16 11 H -0.28 -6.70 7.11 56.52 0.40 -6.30 16 12 H -0.27 -5.93 6.54 56.52 0.37 -5.56 16 13 C 0.55 11.19 7.48 -12.33 -0.09 11.10 16 14 O -0.53 -12.69 16.31 5.32 0.09 -12.60 16 15 C -0.16 -2.51 5.60 -104.83 -0.59 -3.10 16 16 C 0.10 1.33 8.68 -17.13 -0.15 1.18 16 17 N -0.47 -6.02 10.34 -12.90 -0.13 -6.15 16 18 C 0.12 1.39 10.97 -17.43 -0.19 1.20 16 19 C -0.10 -1.19 6.34 -39.41 -0.25 -1.44 16 20 Cl -0.05 -0.57 28.99 -51.86 -1.50 -2.07 16 21 C -0.01 -0.21 9.53 -38.83 -0.37 -0.58 16 22 H 0.07 0.90 7.95 -51.93 -0.41 0.48 16 23 H 0.07 0.64 8.14 -51.93 -0.42 0.21 16 24 H 0.06 0.65 7.07 -51.93 -0.37 0.29 16 25 H 0.09 1.39 8.13 -51.93 -0.42 0.97 16 26 H 0.09 1.19 4.04 -51.97 -0.21 0.98 16 27 H 0.03 0.76 6.94 -51.93 -0.36 0.40 16 28 H 0.04 1.02 6.77 -51.93 -0.35 0.67 16 29 H 0.27 7.51 8.31 -40.82 -0.34 7.17 16 30 H 0.20 2.36 2.52 -52.49 -0.13 2.23 16 31 H 0.17 1.36 8.06 -52.49 -0.42 0.94 16 32 H 0.16 2.33 7.98 -52.48 -0.42 1.91 16 LS Contribution 287.26 15.07 4.33 4.33 Total: -1.00 -32.41 287.26 -6.44 -38.86 By element: Atomic # 1 Polarization: 3.19 SS G_CDS: -3.11 Total: 0.08 kcal Atomic # 6 Polarization: 1.22 SS G_CDS: -1.78 Total: -0.56 kcal Atomic # 7 Polarization: -44.57 SS G_CDS: 0.21 Total: -44.37 kcal Atomic # 8 Polarization: -12.69 SS G_CDS: 0.09 Total: -12.60 kcal Atomic # 14 Polarization: 21.01 SS G_CDS: -4.67 Total: 16.34 kcal Atomic # 17 Polarization: -0.57 SS G_CDS: -1.50 Total: -2.07 kcal Total LS contribution 4.33 Total: 4.33 kcal Total: -32.41 -6.44 -38.86 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000307953337.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 63.865 kcal (2) G-P(sol) polarization free energy of solvation -32.412 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 31.452 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.444 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.857 kcal (6) G-S(sol) free energy of system = (1) + (5) 25.008 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds