Wall clock time and date at job start Mon Mar 30 2020 06:39:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 O 1.20767 * 120.00050 * 2 1 4 4 C 1.50701 * 120.00033 * 179.97438 * 2 1 3 5 5 H 1.08995 * 109.47120 * 325.00523 * 4 2 1 6 6 Cl 1.80295 * 109.47186 * 204.99740 * 4 2 1 7 7 C 1.50708 * 109.47068 * 85.00258 * 4 2 1 8 8 C 1.37638 * 120.12834 * 94.72144 * 7 4 2 9 9 C 1.38611 * 120.24803 * 179.74588 * 8 7 4 10 10 C 1.50698 * 119.75230 * 180.26183 * 9 8 7 11 11 O 1.42902 * 109.47000 * 270.24926 * 10 9 8 12 12 C 1.38658 * 120.49893 * 0.51416 * 9 8 7 13 13 C 1.37595 * 120.25121 * 359.76774 * 12 9 8 14 14 C 1.40695 * 120.12525 * 275.00092 * 7 4 2 15 15 C 1.41391 * 120.24525 * 0.02562 * 14 7 4 16 16 H 1.08003 * 120.00334 * 334.92441 * 15 14 7 17 17 C 1.39946 * 120.00015 * 154.92407 * 15 14 7 18 18 N 1.30819 * 120.00532 * 342.26594 * 17 15 14 19 19 Si 1.86806 * 119.99895 * 162.26461 * 17 15 14 20 20 H 1.48494 * 109.47298 * 89.99946 * 19 17 15 21 21 H 1.48504 * 109.47108 * 210.00076 * 19 17 15 22 22 H 1.48503 * 109.47099 * 329.99979 * 19 17 15 23 23 H 1.08998 * 109.47458 * 270.00061 * 1 2 3 24 24 H 1.09005 * 109.47274 * 30.00030 * 1 2 3 25 25 H 1.09001 * 109.46885 * 149.99594 * 1 2 3 26 26 H 1.07995 * 119.87794 * 0.02562 * 8 7 4 27 27 H 1.09001 * 109.47032 * 30.24943 * 10 9 8 28 28 H 1.09000 * 109.47461 * 150.25131 * 10 9 8 29 29 H 0.96702 * 113.99878 * 179.97438 * 11 10 9 30 30 H 1.07999 * 119.87547 * 179.75202 * 12 9 8 31 31 H 1.08002 * 120.13167 * 179.97438 * 13 12 9 32 32 H 0.96997 * 120.00833 * 180.02562 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 8 2.1108 1.0459 0.0000 4 6 2.2605 -1.3051 0.0006 5 1 1.7131 -2.0404 0.5903 6 17 3.8952 -1.0550 0.7188 7 6 2.4045 -1.8027 -1.4147 8 6 3.5427 -1.5184 -2.1345 9 6 3.6799 -1.9793 -3.4345 10 6 4.9334 -1.6665 -4.2104 11 8 4.7640 -0.4332 -4.9121 12 6 2.6704 -2.7215 -4.0284 13 6 1.5214 -3.0127 -3.3296 14 6 1.3734 -2.5545 -2.0072 15 6 0.1969 -2.8472 -1.2796 16 1 0.2213 -2.8710 -0.2001 17 6 -0.9993 -3.1060 -1.9583 18 7 -1.1322 -2.7483 -3.2096 19 14 -2.4065 -3.9624 -1.0773 20 1 -3.2798 -2.9472 -0.4356 21 1 -3.1986 -4.7485 -2.0571 22 1 -1.8597 -4.8725 -0.0389 23 1 -0.3634 0.0000 1.0276 24 1 -0.3634 0.8900 -0.5139 25 1 -0.3633 -0.8900 -0.5139 26 1 4.3337 -0.9380 -1.6832 27 1 5.7746 -1.5806 -3.5225 28 1 5.1281 -2.4668 -4.9243 29 1 5.5339 -0.1686 -5.4339 30 1 2.7863 -3.0721 -5.0432 31 1 0.7362 -3.5906 -3.7942 32 1 -1.9614 -2.9274 -3.6798 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000396035826.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:39:50 Heat of formation + Delta-G solvation = -87.474362 kcal Electronic energy + Delta-G solvation = -18349.421791 eV Core-core repulsion = 15300.249252 eV Total energy + Delta-G solvation = -3049.172539 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 268.065 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -39.08605 -37.87224 -36.10714 -35.24358 -33.92575 -32.07402 -30.07573 -29.34427 -27.08558 -26.13914 -23.57983 -21.06956 -20.21957 -18.75547 -17.40864 -16.85234 -15.81286 -15.35961 -15.09966 -14.86455 -14.28791 -14.25962 -13.64056 -13.17793 -12.85558 -12.48464 -12.21944 -11.94915 -11.78143 -11.70599 -11.50676 -11.17980 -11.07410 -10.93217 -10.49075 -10.27783 -10.05254 -9.81885 -9.50783 -9.49191 -9.32548 -9.06649 -7.58299 -7.52921 -7.01735 -4.65028 2.26924 2.55347 2.84561 2.90900 2.93936 2.94696 3.02158 3.71601 4.30074 4.70915 5.09743 5.47381 5.53430 5.68265 5.76170 5.82363 5.90951 5.97329 6.15873 6.22678 6.32444 6.43363 6.72284 6.81687 7.05302 7.13976 7.34910 7.58471 7.72346 7.91080 7.99743 8.05944 8.15625 8.33908 8.56089 8.66977 9.90612 Molecular weight = 268.07amu Principal moments of inertia in cm(-1) A = 0.014884 B = 0.009058 C = 0.006481 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1880.727240 B = 3090.483808 C = 4319.057036 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.216 4.216 2 C 0.369 3.631 3 O -0.459 6.459 4 C 0.031 3.969 5 H 0.121 0.879 6 Cl -0.182 7.182 7 C -0.225 4.225 8 C -0.037 4.037 9 C -0.218 4.218 10 C 0.137 3.863 11 O -0.571 6.571 12 C -0.074 4.074 13 C -0.164 4.164 14 C 0.136 3.864 15 C -0.466 4.466 16 H 0.085 0.915 17 C 0.079 3.921 18 N -0.777 5.777 19 Si 0.902 3.098 20 H -0.266 1.266 21 H -0.274 1.274 22 H -0.258 1.258 23 H 0.086 0.914 24 H 0.077 0.923 25 H 0.126 0.874 26 H 0.103 0.897 27 H 0.036 0.964 28 H 0.036 0.964 29 H 0.362 0.638 30 H 0.091 0.909 31 H 0.123 0.877 32 H 0.286 0.714 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.810 -1.303 2.023 3.011 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.272 4.272 2 C 0.244 3.756 3 O -0.333 6.333 4 C -0.013 4.013 5 H 0.138 0.862 6 Cl -0.156 7.156 7 C -0.227 4.227 8 C -0.056 4.056 9 C -0.219 4.219 10 C 0.061 3.939 11 O -0.375 6.375 12 C -0.092 4.092 13 C -0.183 4.183 14 C 0.133 3.867 15 C -0.494 4.494 16 H 0.103 0.897 17 C -0.141 4.141 18 N -0.401 5.401 19 Si 0.725 3.275 20 H -0.191 1.191 21 H -0.199 1.199 22 H -0.181 1.181 23 H 0.105 0.895 24 H 0.096 0.904 25 H 0.144 0.856 26 H 0.121 0.879 27 H 0.054 0.946 28 H 0.055 0.945 29 H 0.207 0.793 30 H 0.109 0.891 31 H 0.141 0.859 32 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges 1.487 -0.747 2.175 2.739 hybrid contribution -0.119 -0.469 -0.021 0.484 sum 1.368 -1.215 2.154 2.827 Atomic orbital electron populations 1.22601 0.93088 1.07585 1.03970 1.24684 0.92321 0.89138 0.69429 1.90361 1.72045 1.34707 1.36162 1.23260 0.82793 0.98406 0.96890 0.86161 1.98665 1.33680 1.97798 1.85434 1.18983 0.99848 1.10382 0.93488 1.20418 0.96136 0.95794 0.93219 1.18869 0.97814 1.10165 0.95070 1.20791 0.95638 0.84652 0.92852 1.86726 1.42735 1.41484 1.66560 1.20632 0.93617 0.97599 0.97386 1.21252 0.96891 1.04241 0.95901 1.17318 0.90668 0.86735 0.92000 1.19569 0.92751 1.42328 0.94782 0.89667 1.25914 1.00267 0.93141 0.94789 1.69806 1.27086 1.32675 1.10505 0.86388 0.80278 0.80404 0.80390 1.19078 1.19865 1.18122 0.89529 0.90371 0.85580 0.87928 0.94554 0.94538 0.79346 0.89077 0.85922 0.90308 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.22 -3.76 10.25 36.00 0.37 -3.39 16 2 C 0.37 7.46 6.41 -29.04 -0.19 7.28 16 3 O -0.46 -10.38 17.01 5.99 0.10 -10.28 16 4 C 0.03 0.61 2.84 -29.03 -0.08 0.53 16 5 H 0.12 2.20 6.48 -51.93 -0.34 1.87 16 6 Cl -0.18 -3.53 26.09 -51.86 -1.35 -4.89 16 7 C -0.23 -5.10 5.06 -103.91 -0.53 -5.62 16 8 C -0.04 -0.85 8.79 -39.66 -0.35 -1.20 16 9 C -0.22 -4.83 5.53 -104.33 -0.58 -5.41 16 10 C 0.14 2.52 7.16 36.00 0.26 2.77 16 11 O -0.57 -10.53 13.64 -35.23 -0.48 -11.01 16 12 C -0.07 -1.66 9.67 -39.66 -0.38 -2.05 16 13 C -0.16 -3.91 8.69 -38.87 -0.34 -4.25 16 14 C 0.14 3.20 5.57 -106.83 -0.59 2.60 16 15 C -0.47 -10.30 5.68 -37.74 -0.21 -10.52 16 16 H 0.09 1.74 6.16 -52.48 -0.32 1.41 16 17 C 0.08 1.71 5.09 -17.34 -0.09 1.62 16 18 N -0.78 -17.74 10.99 55.55 0.61 -17.13 16 19 Si 0.90 16.17 29.59 -169.99 -5.03 11.13 16 20 H -0.27 -4.67 7.11 56.52 0.40 -4.27 16 21 H -0.27 -4.94 7.11 56.52 0.40 -4.54 16 22 H -0.26 -4.61 7.11 56.52 0.40 -4.21 16 23 H 0.09 1.23 8.14 -51.93 -0.42 0.80 16 24 H 0.08 1.33 8.14 -51.93 -0.42 0.91 16 25 H 0.13 2.39 4.65 -51.93 -0.24 2.15 16 26 H 0.10 2.29 6.63 -52.49 -0.35 1.94 16 27 H 0.04 0.61 8.08 -51.93 -0.42 0.19 16 28 H 0.04 0.59 8.08 -51.93 -0.42 0.17 16 29 H 0.36 4.45 9.12 45.56 0.42 4.87 16 30 H 0.09 1.87 8.06 -52.49 -0.42 1.44 16 31 H 0.12 2.98 6.20 -52.49 -0.33 2.66 16 32 H 0.29 5.96 8.30 -40.82 -0.34 5.63 16 LS Contribution 287.43 15.07 4.33 4.33 Total: -1.00 -27.51 287.43 -6.93 -34.44 By element: Atomic # 1 Polarization: 13.43 SS G_CDS: -2.40 Total: 11.03 kcal Atomic # 6 Polarization: -14.92 SS G_CDS: -2.71 Total: -17.63 kcal Atomic # 7 Polarization: -17.74 SS G_CDS: 0.61 Total: -17.13 kcal Atomic # 8 Polarization: -20.91 SS G_CDS: -0.38 Total: -21.29 kcal Atomic # 14 Polarization: 16.17 SS G_CDS: -5.03 Total: 11.13 kcal Atomic # 17 Polarization: -3.53 SS G_CDS: -1.35 Total: -4.89 kcal Total LS contribution 4.33 Total: 4.33 kcal Total: -27.51 -6.93 -34.44 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000396035826.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -53.035 kcal (2) G-P(sol) polarization free energy of solvation -27.506 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -80.541 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.934 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.440 kcal (6) G-S(sol) free energy of system = (1) + (5) -87.474 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds