Wall clock time and date at job start Mon Mar 30 2020 06:33:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 H 1.09002 * 109.46883 * 2 1 4 4 Cl 1.80297 * 109.46968 * 240.00343 * 2 1 3 5 5 C 1.50691 * 109.47153 * 119.99919 * 2 1 3 6 6 O 1.21345 * 120.00248 * 95.00269 * 5 2 1 7 7 C 1.46600 * 120.00219 * 275.00016 * 5 2 1 8 8 C 1.39691 * 120.58963 * 354.51127 * 7 5 2 9 9 C 1.38010 * 120.02397 * 180.02562 * 8 7 5 10 10 C 1.50703 * 119.34961 * 180.02562 * 9 8 7 11 11 O 1.42899 * 109.47169 * 89.99715 * 10 9 8 12 12 C 1.38728 * 121.30769 * 359.97438 * 9 8 7 13 13 C 1.37510 * 121.22513 * 359.73694 * 12 9 8 14 14 C 1.40831 * 119.86321 * 0.52109 * 13 12 9 15 15 C 1.40719 * 120.61864 * 179.76509 * 14 13 12 16 16 H 1.08001 * 119.99642 * 146.56179 * 15 14 13 17 17 C 1.40390 * 120.00459 * 326.55491 * 15 14 13 18 18 N 1.30562 * 119.99649 * 338.23038 * 17 15 14 19 19 Si 1.86796 * 120.00455 * 158.22685 * 17 15 14 20 20 H 1.48498 * 109.47261 * 180.02562 * 19 17 15 21 21 H 1.48504 * 109.47009 * 300.00696 * 19 17 15 22 22 H 1.48505 * 109.46943 * 60.00188 * 19 17 15 23 23 H 1.09006 * 109.47297 * 299.99696 * 1 2 3 24 24 H 1.09001 * 109.47280 * 60.00225 * 1 2 3 25 25 H 1.09002 * 109.46883 * 179.97438 * 1 2 3 26 26 H 1.08003 * 119.98939 * 0.02562 * 8 7 5 27 27 H 1.08996 * 109.47031 * 209.99959 * 10 9 8 28 28 H 1.09001 * 109.46853 * 329.99389 * 10 9 8 29 29 H 0.96702 * 113.99897 * 180.02562 * 11 10 9 30 30 H 1.07999 * 119.38856 * 180.02562 * 12 9 8 31 31 H 1.08000 * 120.06765 * 180.26729 * 13 12 9 32 32 H 0.97001 * 120.00836 * 354.24842 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 17 2.1310 -0.8499 -1.4722 5 6 2.0324 -0.7103 1.2304 6 8 2.3210 -1.8877 1.1760 7 6 2.1724 0.0210 2.4932 8 6 1.9536 1.3997 2.5443 9 6 2.0892 2.0766 3.7393 10 6 1.8490 3.5639 3.7772 11 8 0.4712 3.8168 4.0598 12 6 2.4412 1.4149 4.9067 13 6 2.6631 0.0579 4.9177 14 6 2.5441 -0.6819 3.7253 15 6 2.7725 -2.0704 3.7174 16 1 2.2099 -2.7063 3.0499 17 6 3.7317 -2.6290 4.5769 18 7 4.6888 -1.8835 5.0594 19 14 3.6386 -4.4387 5.0304 20 1 4.7585 -4.7782 5.9446 21 1 2.3461 -4.7133 5.7082 22 1 3.7368 -5.2632 3.7991 23 1 -0.3634 0.5138 0.8900 24 1 -0.3634 0.5138 -0.8900 25 1 -0.3633 -1.0277 -0.0005 26 1 1.6782 1.9361 1.6483 27 1 2.4676 4.0121 4.5546 28 1 2.1076 3.9983 2.8115 29 1 0.2437 4.7559 4.0989 30 1 2.5382 1.9752 5.8249 31 1 2.9321 -0.4390 5.8382 32 1 4.7871 -0.9662 4.7599 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000396036521.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:33:00 Heat of formation + Delta-G solvation = -94.579688 kcal Electronic energy + Delta-G solvation = -18106.412525 eV Core-core repulsion = 15056.931875 eV Total energy + Delta-G solvation = -3049.480649 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 268.065 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -38.87619 -37.39389 -36.04732 -35.47920 -34.19410 -32.31886 -30.32001 -29.70932 -26.83941 -24.62524 -23.60667 -22.17409 -20.46216 -18.56719 -18.13745 -17.02121 -15.83725 -15.29666 -14.84935 -14.55760 -14.32094 -14.09695 -13.83777 -13.24746 -13.01204 -12.55767 -12.38434 -12.12398 -11.87446 -11.74224 -11.40816 -11.25394 -10.94858 -10.70184 -10.50266 -10.40519 -10.26299 -10.09117 -9.74995 -9.62387 -9.25350 -8.47906 -7.91816 -7.74567 -7.37704 -4.72089 1.85746 2.47199 2.54605 3.08971 3.16458 3.29394 3.52631 3.86597 4.28743 4.69126 4.89352 5.14569 5.20817 5.35653 5.56438 5.61869 5.73967 5.82212 5.88854 5.98842 6.06776 6.21831 6.56649 6.62083 6.77788 7.14483 7.27051 7.39774 7.61343 7.68793 7.86285 7.96676 7.99027 8.50002 8.55181 8.70835 9.74712 Molecular weight = 268.07amu Principal moments of inertia in cm(-1) A = 0.011936 B = 0.009213 C = 0.005553 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2345.322523 B = 3038.346856 C = 5041.048595 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.146 4.146 2 C -0.045 4.045 3 H 0.111 0.889 4 Cl -0.174 7.174 5 C 0.385 3.615 6 O -0.450 6.450 7 C -0.301 4.301 8 C -0.005 4.005 9 C -0.243 4.243 10 C 0.138 3.862 11 O -0.573 6.573 12 C -0.045 4.045 13 C -0.209 4.209 14 C 0.121 3.879 15 C -0.444 4.444 16 H 0.106 0.894 17 C 0.031 3.969 18 N -0.768 5.768 19 Si 1.069 2.931 20 H -0.271 1.271 21 H -0.271 1.271 22 H -0.269 1.269 23 H 0.080 0.920 24 H 0.068 0.932 25 H 0.069 0.931 26 H 0.097 0.903 27 H 0.037 0.963 28 H 0.036 0.964 29 H 0.363 0.637 30 H 0.093 0.907 31 H 0.108 0.892 32 H 0.302 0.698 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.241 6.303 -3.463 8.349 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.204 4.204 2 C -0.089 4.089 3 H 0.129 0.871 4 Cl -0.148 7.148 5 C 0.266 3.734 6 O -0.328 6.328 7 C -0.303 4.303 8 C -0.024 4.024 9 C -0.244 4.244 10 C 0.062 3.938 11 O -0.377 6.377 12 C -0.064 4.064 13 C -0.228 4.228 14 C 0.117 3.883 15 C -0.469 4.469 16 H 0.124 0.876 17 C -0.194 4.194 18 N -0.390 5.390 19 Si 0.891 3.109 20 H -0.196 1.196 21 H -0.196 1.196 22 H -0.194 1.194 23 H 0.099 0.901 24 H 0.087 0.913 25 H 0.088 0.912 26 H 0.114 0.886 27 H 0.055 0.945 28 H 0.055 0.945 29 H 0.208 0.792 30 H 0.111 0.889 31 H 0.126 0.874 32 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -3.291 3.834 -2.657 5.709 hybrid contribution -0.631 2.226 -1.049 2.541 sum -3.922 6.060 -3.706 8.114 Atomic orbital electron populations 1.21956 0.91294 1.03841 1.03277 1.24731 0.98200 0.99344 0.86667 0.87108 1.98695 1.90263 1.82115 1.43720 1.21592 0.76180 0.88421 0.87208 1.90497 1.39624 1.16915 1.85811 1.20630 1.23811 0.92774 0.93121 1.20729 0.93008 0.92929 0.95723 1.18599 1.17796 0.93458 0.94543 1.20779 0.81449 0.94103 0.97509 1.86699 1.27698 1.28643 1.94703 1.20520 0.95933 0.94239 0.95734 1.21188 1.10468 0.93667 0.97444 1.18594 0.88138 0.92462 0.89141 1.21277 1.15966 0.93120 1.16532 0.87627 1.27460 0.92083 1.08389 0.91423 1.70358 1.24820 1.11529 1.32291 0.83574 0.77760 0.71666 0.77922 1.19554 1.19600 1.19381 0.90120 0.91252 0.91192 0.88552 0.94451 0.94548 0.79203 0.88878 0.87399 0.88389 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.15 9.30 37.16 0.35 -1.80 16 2 C -0.04 -0.78 3.17 -27.89 -0.09 -0.86 16 3 H 0.11 1.71 6.56 -51.93 -0.34 1.37 16 4 Cl -0.17 -3.07 28.00 -51.86 -1.45 -4.52 16 5 C 0.38 8.49 6.24 -30.94 -0.19 8.30 16 6 O -0.45 -11.35 13.71 5.50 0.08 -11.27 16 7 C -0.30 -6.99 6.06 -102.60 -0.62 -7.61 16 8 C -0.01 -0.11 9.01 -39.12 -0.35 -0.46 16 9 C -0.24 -4.94 5.51 -104.52 -0.58 -5.52 16 10 C 0.14 2.24 7.13 36.01 0.26 2.50 16 11 O -0.57 -9.11 13.64 -35.23 -0.48 -9.59 16 12 C -0.05 -0.98 9.59 -39.67 -0.38 -1.36 16 13 C -0.21 -4.99 7.97 -38.87 -0.31 -5.30 16 14 C 0.12 3.08 5.30 -104.59 -0.55 2.52 16 15 C -0.44 -11.55 7.76 -37.84 -0.29 -11.84 16 16 H 0.11 2.85 6.09 -52.49 -0.32 2.53 16 17 C 0.03 0.76 5.00 -17.28 -0.09 0.68 16 18 N -0.77 -19.42 12.57 55.57 0.70 -18.72 16 19 Si 1.07 21.19 29.99 -169.99 -5.10 16.09 16 20 H -0.27 -5.25 7.11 56.52 0.40 -4.84 16 21 H -0.27 -5.12 7.11 56.52 0.40 -4.72 16 22 H -0.27 -5.25 7.11 56.52 0.40 -4.85 16 23 H 0.08 1.17 8.14 -51.93 -0.42 0.75 16 24 H 0.07 0.83 8.14 -51.93 -0.42 0.41 16 25 H 0.07 1.07 8.14 -51.93 -0.42 0.65 16 26 H 0.10 1.68 6.39 -52.48 -0.34 1.34 16 27 H 0.04 0.55 8.07 -51.93 -0.42 0.13 16 28 H 0.04 0.52 8.07 -51.93 -0.42 0.10 16 29 H 0.36 3.65 9.12 45.56 0.42 4.07 16 30 H 0.09 1.80 8.06 -52.49 -0.42 1.37 16 31 H 0.11 2.61 7.01 -52.49 -0.37 2.25 16 32 H 0.30 7.81 6.77 -40.82 -0.28 7.53 16 LS Contribution 291.82 15.07 4.40 4.40 Total: -1.00 -29.02 291.82 -7.26 -36.28 By element: Atomic # 1 Polarization: 10.63 SS G_CDS: -2.55 Total: 8.09 kcal Atomic # 6 Polarization: -17.91 SS G_CDS: -2.85 Total: -20.76 kcal Atomic # 7 Polarization: -19.42 SS G_CDS: 0.70 Total: -18.72 kcal Atomic # 8 Polarization: -20.45 SS G_CDS: -0.41 Total: -20.86 kcal Atomic # 14 Polarization: 21.19 SS G_CDS: -5.10 Total: 16.09 kcal Atomic # 17 Polarization: -3.07 SS G_CDS: -1.45 Total: -4.52 kcal Total LS contribution 4.40 Total: 4.40 kcal Total: -29.02 -7.26 -36.28 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000396036521.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -58.295 kcal (2) G-P(sol) polarization free energy of solvation -29.023 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.318 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.261 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.284 kcal (6) G-S(sol) free energy of system = (1) + (5) -94.580 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds