Wall clock time and date at job start Mon Mar 30 2020 06:40:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50707 * 1 3 3 O 1.20759 * 120.00227 * 2 1 4 4 C 1.50695 * 119.99512 * 180.02562 * 2 1 3 5 5 H 1.09004 * 109.47087 * 34.99957 * 4 2 1 6 6 Cl 1.80301 * 109.47111 * 154.99872 * 4 2 1 7 7 C 1.50704 * 109.47359 * 274.99880 * 4 2 1 8 8 C 1.40735 * 120.12587 * 285.45375 * 7 4 2 9 9 C 1.41398 * 120.24453 * 359.97438 * 8 7 4 10 10 H 1.08001 * 119.99775 * 29.56574 * 9 8 7 11 11 C 1.39939 * 119.99925 * 209.55545 * 9 8 7 12 12 N 1.30821 * 120.00174 * 11.93147 * 11 9 8 13 13 Si 1.86800 * 119.99960 * 191.92629 * 11 9 8 14 14 H 1.48507 * 109.47206 * 0.02562 * 13 11 9 15 15 H 1.48505 * 109.47137 * 120.00520 * 13 11 9 16 16 H 1.48498 * 109.47358 * 240.00151 * 13 11 9 17 17 C 1.40695 * 119.50852 * 180.29492 * 8 7 4 18 18 C 1.37638 * 119.74718 * 359.43037 * 17 8 7 19 19 C 1.38609 * 120.24520 * 0.24980 * 18 17 8 20 20 C 1.37600 * 120.12718 * 105.12811 * 7 4 2 21 21 C 1.50697 * 119.87450 * 0.02562 * 20 7 4 22 22 O 1.42901 * 109.46629 * 179.97438 * 21 20 7 23 23 H 1.09002 * 109.47364 * 240.00423 * 1 2 3 24 24 H 1.09002 * 109.46872 * 359.97438 * 1 2 3 25 25 H 1.08990 * 109.47393 * 119.99978 * 1 2 3 26 26 H 0.97008 * 120.00304 * 179.97438 * 12 11 9 27 27 H 1.08001 * 120.12470 * 179.70004 * 17 8 7 28 28 H 1.08002 * 119.87639 * 180.27729 * 18 17 8 29 29 H 1.08007 * 119.74816 * 180.02562 * 19 18 17 30 30 H 1.08992 * 109.47509 * 299.97274 * 21 20 7 31 31 H 1.08998 * 109.47546 * 59.97853 * 21 20 7 32 32 H 0.96705 * 113.99962 * 179.97438 * 22 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 8 2.1109 1.0458 0.0000 4 6 2.2604 -1.3051 -0.0006 5 1 1.7130 -2.0404 -0.5904 6 17 3.8952 -1.0551 -0.7189 7 6 2.4044 -1.8028 1.4146 8 6 3.3231 -1.1917 2.2883 9 6 4.1162 -0.1086 1.8440 10 1 3.7435 0.5549 1.0777 11 6 5.3839 0.1035 2.3974 12 7 5.9331 -0.8176 3.1466 13 14 6.2920 1.7020 2.0662 14 1 5.4608 2.5725 1.1962 15 1 6.5571 2.3962 3.3519 16 1 7.5798 1.4083 1.3876 17 6 3.4513 -1.6708 3.6049 18 6 2.6705 -2.7223 4.0281 19 6 1.7642 -3.3121 3.1610 20 6 1.6333 -2.8520 1.8596 21 6 0.6439 -3.5041 0.9285 22 8 -0.0309 -4.5605 1.6147 23 1 -0.3634 -0.5138 0.8900 24 1 -0.3633 1.0277 0.0005 25 1 -0.3633 -0.5138 -0.8899 26 1 6.8120 -0.6707 3.5299 27 1 4.1567 -1.2124 4.2822 28 1 2.7640 -3.0888 5.0397 29 1 1.1551 -4.1365 3.5017 30 1 -0.0838 -2.7642 0.5955 31 1 1.1706 -3.9101 0.0649 32 1 -0.6846 -5.0256 1.0749 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000396039959.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:40:03 Heat of formation + Delta-G solvation = -76.416894 kcal Electronic energy + Delta-G solvation = -18718.545273 eV Core-core repulsion = 15669.852222 eV Total energy + Delta-G solvation = -3048.693051 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 268.065 amu Computer time = 0.41 seconds Orbital eigenvalues (eV) -39.25004 -37.85002 -36.16199 -34.85876 -33.63188 -32.01355 -30.11588 -29.70891 -26.79316 -25.04440 -24.75717 -20.77855 -20.13675 -18.74692 -17.07596 -17.00093 -15.88211 -15.16757 -15.00879 -14.86182 -14.36560 -14.28506 -13.57012 -13.47914 -12.93168 -12.37509 -12.23130 -12.02311 -11.79801 -11.59817 -11.45846 -11.11125 -10.96002 -10.70019 -10.39525 -10.01732 -9.97026 -9.81361 -9.59827 -9.19912 -8.97770 -8.79507 -7.39176 -7.21449 -6.70312 -4.27658 2.24474 2.71898 2.82829 3.14363 3.20705 3.24702 3.25718 4.03983 4.53513 4.64504 4.72406 5.29826 5.36070 5.54168 5.56052 5.58450 5.71331 5.75872 5.89904 5.97306 6.21641 6.44112 6.73936 7.05148 7.23947 7.31978 7.48072 7.73372 7.89633 7.94340 8.08343 8.12470 8.25465 8.72157 8.90229 8.93830 10.24287 Molecular weight = 268.07amu Principal moments of inertia in cm(-1) A = 0.018510 B = 0.009585 C = 0.007380 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1512.351142 B = 2920.438307 C = 3793.356233 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.198 4.198 2 C 0.351 3.649 3 O -0.428 6.428 4 C 0.023 3.977 5 H 0.099 0.901 6 Cl -0.149 7.149 7 C -0.224 4.224 8 C 0.126 3.874 9 C -0.434 4.434 10 H 0.110 0.890 11 C 0.076 3.924 12 N -0.794 5.794 13 Si 0.900 3.100 14 H -0.255 1.255 15 H -0.274 1.274 16 H -0.275 1.275 17 C -0.149 4.149 18 C -0.106 4.106 19 C -0.213 4.213 20 C -0.051 4.051 21 C 0.118 3.882 22 O -0.564 6.564 23 H 0.094 0.906 24 H 0.081 0.919 25 H 0.086 0.914 26 H 0.278 0.722 27 H 0.120 0.880 28 H 0.089 0.911 29 H 0.101 0.899 30 H 0.046 0.954 31 H 0.048 0.952 32 H 0.369 0.631 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.590 -2.007 -5.211 10.245 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.256 4.256 2 C 0.224 3.776 3 O -0.299 6.299 4 C -0.022 4.022 5 H 0.117 0.883 6 Cl -0.122 7.122 7 C -0.226 4.226 8 C 0.123 3.877 9 C -0.463 4.463 10 H 0.128 0.872 11 C -0.141 4.141 12 N -0.419 5.419 13 Si 0.725 3.275 14 H -0.178 1.178 15 H -0.199 1.199 16 H -0.200 1.200 17 C -0.168 4.168 18 C -0.125 4.125 19 C -0.233 4.233 20 C -0.051 4.051 21 C 0.041 3.959 22 O -0.368 6.368 23 H 0.112 0.888 24 H 0.100 0.900 25 H 0.105 0.895 26 H 0.089 0.911 27 H 0.137 0.863 28 H 0.108 0.892 29 H 0.119 0.881 30 H 0.064 0.936 31 H 0.066 0.934 32 H 0.214 0.786 Dipole moment (debyes) X Y Z Total from point charges -7.507 -1.244 -4.665 8.925 hybrid contribution 0.287 0.224 -0.531 0.643 sum -7.221 -1.020 -5.195 8.954 Atomic orbital electron populations 1.22277 0.94382 1.04704 1.04196 1.24624 0.91514 0.90189 0.71275 1.90379 1.71285 1.34407 1.33855 1.22880 0.85632 0.97001 0.96641 0.88343 1.98702 1.31743 1.97574 1.84201 1.18644 1.09374 1.02840 0.91789 1.17339 0.89403 0.90714 0.90243 1.20345 0.98635 1.09342 1.17974 0.87215 1.25881 0.98122 0.97128 0.93007 1.69822 1.15106 1.31999 1.25013 0.86350 0.79512 0.82515 0.79169 1.17776 1.19924 1.20030 1.21418 1.00444 0.98635 0.96322 1.20788 0.96764 0.97226 0.97686 1.20126 1.04576 1.04515 0.94065 1.18810 0.96271 0.95413 0.94621 1.21001 0.93151 0.88189 0.93594 1.86574 1.57533 1.50093 1.42597 0.88784 0.89995 0.89542 0.91097 0.86253 0.89239 0.88081 0.93592 0.93398 0.78594 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.20 -2.60 10.00 36.01 0.36 -2.24 16 2 C 0.35 6.47 6.12 -29.03 -0.18 6.29 16 3 O -0.43 -9.39 14.64 6.00 0.09 -9.31 16 4 C 0.02 0.44 2.89 -29.04 -0.08 0.36 16 5 H 0.10 1.56 6.19 -51.93 -0.32 1.24 16 6 Cl -0.15 -3.24 24.68 -51.86 -1.28 -4.52 16 7 C -0.22 -5.01 4.89 -103.91 -0.51 -5.52 16 8 C 0.13 3.23 5.42 -106.82 -0.58 2.66 16 9 C -0.43 -11.37 6.40 -37.74 -0.24 -11.61 16 10 H 0.11 2.91 3.78 -52.49 -0.20 2.71 16 11 C 0.08 1.95 5.23 -17.35 -0.09 1.86 16 12 N -0.79 -20.66 10.94 55.55 0.61 -20.05 16 13 Si 0.90 19.96 29.58 -169.99 -5.03 14.93 16 14 H -0.25 -5.78 7.11 56.52 0.40 -5.38 16 15 H -0.27 -5.88 7.11 56.52 0.40 -5.48 16 16 H -0.27 -6.01 7.11 56.52 0.40 -5.61 16 17 C -0.15 -3.80 8.66 -38.87 -0.34 -4.14 16 18 C -0.11 -2.46 10.02 -39.66 -0.40 -2.86 16 19 C -0.21 -4.73 9.39 -39.29 -0.37 -5.10 16 20 C -0.05 -1.06 5.87 -104.70 -0.61 -1.67 16 21 C 0.12 1.85 5.94 36.00 0.21 2.06 16 22 O -0.56 -8.42 12.12 -35.23 -0.43 -8.85 16 23 H 0.09 1.21 7.75 -51.93 -0.40 0.81 16 24 H 0.08 1.01 8.12 -51.93 -0.42 0.59 16 25 H 0.09 0.85 8.14 -51.93 -0.42 0.43 16 26 H 0.28 6.66 8.30 -40.82 -0.34 6.32 16 27 H 0.12 3.16 6.31 -52.49 -0.33 2.83 16 28 H 0.09 1.87 8.06 -52.49 -0.42 1.45 16 29 H 0.10 2.14 6.98 -52.48 -0.37 1.77 16 30 H 0.05 0.61 7.45 -51.93 -0.39 0.22 16 31 H 0.05 0.70 7.58 -51.93 -0.39 0.30 16 32 H 0.37 3.33 9.12 45.56 0.42 3.74 16 LS Contribution 281.87 15.07 4.25 4.25 Total: -1.00 -30.52 281.87 -7.00 -37.52 By element: Atomic # 1 Polarization: 8.32 SS G_CDS: -2.39 Total: 5.94 kcal Atomic # 6 Polarization: -17.09 SS G_CDS: -2.82 Total: -19.92 kcal Atomic # 7 Polarization: -20.66 SS G_CDS: 0.61 Total: -20.05 kcal Atomic # 8 Polarization: -17.81 SS G_CDS: -0.34 Total: -18.15 kcal Atomic # 14 Polarization: 19.96 SS G_CDS: -5.03 Total: 14.93 kcal Atomic # 17 Polarization: -3.24 SS G_CDS: -1.28 Total: -4.52 kcal Total LS contribution 4.25 Total: 4.25 kcal Total: -30.52 -7.00 -37.52 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000396039959.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -38.896 kcal (2) G-P(sol) polarization free energy of solvation -30.519 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -69.415 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.002 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.521 kcal (6) G-S(sol) free energy of system = (1) + (5) -76.417 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.41 seconds