Wall clock time and date at job start Mon Mar 30 2020 06:40:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 O 1.20753 * 119.99831 * 2 1 4 4 C 1.50703 * 119.99969 * 180.02562 * 2 1 3 5 5 H 1.08998 * 109.46684 * 154.99466 * 4 2 1 6 6 Cl 1.80299 * 109.47083 * 34.99866 * 4 2 1 7 7 C 1.50692 * 109.47055 * 274.99497 * 4 2 1 8 8 C 1.37642 * 119.87709 * 65.00342 * 7 4 2 9 9 C 1.40688 * 119.74904 * 179.97438 * 8 7 4 10 10 C 1.41398 * 120.24835 * 179.97438 * 9 8 7 11 11 H 1.08003 * 119.99731 * 330.24010 * 10 9 8 12 12 C 1.39945 * 120.00081 * 150.22924 * 10 9 8 13 13 N 1.30826 * 119.99924 * 161.71406 * 12 10 9 14 14 Si 1.86795 * 120.00173 * 341.72103 * 12 10 9 15 15 H 1.48508 * 109.47314 * 95.40693 * 14 12 10 16 16 H 1.48502 * 109.47098 * 215.40691 * 14 12 10 17 17 H 1.48497 * 109.47410 * 335.40592 * 14 12 10 18 18 C 1.40735 * 119.51232 * 0.02562 * 9 8 7 19 19 C 1.37604 * 119.74143 * 0.02562 * 18 9 8 20 20 C 1.50695 * 119.87292 * 180.02562 * 19 18 9 21 21 O 1.42901 * 109.47293 * 89.99433 * 20 19 18 22 22 C 1.38615 * 119.87829 * 244.72863 * 7 4 2 23 23 H 1.08999 * 109.46978 * 269.99258 * 1 2 3 24 24 H 1.09001 * 109.46889 * 149.99786 * 1 2 3 25 25 H 1.08989 * 109.47421 * 29.99848 * 1 2 3 26 26 H 1.08006 * 120.12537 * 0.02562 * 8 7 4 27 27 H 0.96993 * 120.00316 * 180.02562 * 13 12 10 28 28 H 1.08001 * 120.12953 * 179.97438 * 18 9 8 29 29 H 1.08997 * 109.47261 * 210.00007 * 20 19 18 30 30 H 1.09008 * 109.47136 * 329.99943 * 20 19 18 31 31 H 0.96694 * 114.00323 * 179.97438 * 21 20 19 32 32 H 1.08001 * 119.74539 * 359.97438 * 22 7 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 8 2.1108 1.0458 0.0000 4 6 2.2606 -1.3051 -0.0006 5 1 3.2488 -1.1538 -0.4349 6 17 1.3551 -2.5214 -0.9761 7 6 2.4046 -1.8026 1.4145 8 6 1.2865 -2.1633 2.1316 9 6 1.4241 -2.6279 3.4524 10 6 0.2826 -3.0008 4.1989 11 1 -0.6669 -2.5225 4.0087 12 6 0.3830 -3.9897 5.1841 13 7 -0.5405 -4.0917 6.1051 14 14 1.8359 -5.1638 5.1842 15 1 2.8847 -4.6535 6.1034 16 1 1.3886 -6.5047 5.6393 17 1 2.3894 -5.2666 3.8101 18 6 2.7062 -2.7178 4.0257 19 6 3.8100 -2.3508 3.2905 20 6 5.1843 -2.4464 3.9012 21 8 5.7340 -3.7388 3.6372 22 6 3.6630 -1.9007 1.9873 23 1 -0.3633 -0.0001 1.0277 24 1 -0.3633 -0.8900 -0.5139 25 1 -0.3634 0.8899 -0.5137 26 1 0.3072 -2.0907 1.6818 27 1 -0.4707 -4.7768 6.7881 28 1 2.8234 -3.0728 5.0390 29 1 5.8287 -1.6819 3.4672 30 1 5.1147 -2.2943 4.9783 31 1 6.6198 -3.8714 4.0016 32 1 4.5353 -1.6201 1.4156 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000396041270.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:40:20 Heat of formation + Delta-G solvation = -87.428546 kcal Electronic energy + Delta-G solvation = -18063.539898 eV Core-core repulsion = 15014.369346 eV Total energy + Delta-G solvation = -3049.170552 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 268.065 amu Computer time = 0.12 seconds Orbital eigenvalues (eV) -39.55750 -38.28437 -36.32641 -35.77000 -33.86960 -32.24749 -30.98227 -29.89175 -26.94843 -25.30381 -25.26390 -21.26739 -20.16842 -19.19817 -17.33930 -17.09735 -15.98887 -15.82165 -15.64783 -15.07987 -14.75694 -14.49460 -13.90339 -13.46735 -13.07033 -12.95640 -12.58585 -12.10700 -12.08119 -12.01112 -11.91216 -11.40216 -11.02309 -10.94434 -10.66498 -10.51939 -10.29869 -9.96898 -9.79711 -9.67050 -9.42217 -9.23828 -7.83815 -7.75519 -7.03566 -4.59736 1.61124 2.24534 2.37445 2.69134 3.08761 3.17583 3.34021 3.94121 4.02807 4.34103 4.84980 4.92605 5.04852 5.30243 5.33738 5.55105 5.58741 5.63875 5.66817 5.86109 6.07862 6.11231 6.34266 6.46913 6.75159 6.96470 7.19630 7.36469 7.44629 7.49908 7.67839 7.85903 7.92991 8.22351 8.47858 8.68166 9.97997 Molecular weight = 268.07amu Principal moments of inertia in cm(-1) A = 0.017028 B = 0.007711 C = 0.006278 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1643.944932 B = 3630.349798 C = 4458.831144 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C 0.375 3.625 3 O -0.452 6.452 4 C 0.002 3.998 5 H 0.120 0.880 6 Cl -0.158 7.158 7 C -0.075 4.075 8 C -0.175 4.175 9 C 0.088 3.912 10 C -0.444 4.444 11 H 0.093 0.907 12 C 0.085 3.915 13 N -0.803 5.803 14 Si 0.907 3.093 15 H -0.271 1.271 16 H -0.289 1.289 17 H -0.240 1.240 18 C -0.202 4.202 19 C -0.056 4.056 20 C 0.119 3.881 21 O -0.566 6.566 22 C -0.198 4.198 23 H 0.106 0.894 24 H 0.095 0.905 25 H 0.085 0.915 26 H 0.110 0.890 27 H 0.286 0.714 28 H 0.104 0.896 29 H 0.046 0.954 30 H 0.047 0.953 31 H 0.369 0.631 32 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.415 2.547 -6.603 8.911 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.267 4.267 2 C 0.250 3.750 3 O -0.325 6.325 4 C -0.043 4.043 5 H 0.138 0.862 6 Cl -0.131 7.131 7 C -0.075 4.075 8 C -0.194 4.194 9 C 0.085 3.915 10 C -0.472 4.472 11 H 0.111 0.889 12 C -0.134 4.134 13 N -0.427 5.427 14 Si 0.733 3.267 15 H -0.197 1.197 16 H -0.217 1.217 17 H -0.162 1.162 18 C -0.222 4.222 19 C -0.056 4.056 20 C 0.042 3.958 21 O -0.370 6.370 22 C -0.217 4.217 23 H 0.124 0.876 24 H 0.114 0.886 25 H 0.104 0.896 26 H 0.128 0.872 27 H 0.097 0.903 28 H 0.122 0.878 29 H 0.065 0.935 30 H 0.065 0.935 31 H 0.215 0.785 32 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges 4.905 2.840 -6.762 8.823 hybrid contribution 1.035 -0.690 0.487 1.335 sum 5.940 2.150 -6.276 8.904 Atomic orbital electron populations 1.22379 0.93345 1.05227 1.05765 1.24523 0.92659 0.88645 0.69201 1.90411 1.72190 1.33832 1.36070 1.23594 0.98024 0.88599 0.94035 0.86173 1.98712 1.78522 1.61656 1.74215 1.18780 0.95027 1.02871 0.90843 1.20931 0.96349 1.07872 0.94252 1.17640 0.92337 0.90608 0.90891 1.19447 0.96698 1.17911 1.13120 0.88875 1.26146 0.97058 0.97831 0.92394 1.69683 1.33611 1.29700 1.09704 0.86372 0.80365 0.78197 0.81782 1.19691 1.21677 1.16249 1.21034 0.92834 1.08788 0.99520 1.19028 0.92655 0.99715 0.94186 1.21027 0.92531 0.84273 0.97956 1.86647 1.35416 1.34207 1.80732 1.20011 0.94773 1.11473 0.95490 0.87559 0.88588 0.89606 0.87182 0.90309 0.87814 0.93544 0.93517 0.78544 0.88348 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.21 -2.77 9.20 36.01 0.33 -2.44 16 2 C 0.37 6.00 6.19 -29.03 -0.18 5.82 16 3 O -0.45 -8.26 17.84 6.00 0.11 -8.15 16 4 C 0.00 0.03 3.36 -29.04 -0.10 -0.07 16 5 H 0.12 1.82 7.87 -51.93 -0.41 1.42 16 6 Cl -0.16 -2.44 26.23 -51.86 -1.36 -3.80 16 7 C -0.07 -1.48 4.84 -104.70 -0.51 -1.99 16 8 C -0.17 -3.78 8.56 -38.87 -0.33 -4.11 16 9 C 0.09 2.14 5.10 -106.83 -0.55 1.60 16 10 C -0.44 -11.49 9.57 -37.74 -0.36 -11.85 16 11 H 0.09 2.49 8.06 -52.48 -0.42 2.06 16 12 C 0.09 2.18 5.40 -17.34 -0.09 2.09 16 13 N -0.80 -20.84 13.93 55.55 0.77 -20.07 16 14 Si 0.91 20.86 24.52 -169.99 -4.17 16.69 16 15 H -0.27 -6.07 6.71 56.52 0.38 -5.69 16 16 H -0.29 -6.42 7.11 56.52 0.40 -6.02 16 17 H -0.24 -5.83 6.87 56.52 0.39 -5.44 16 18 C -0.20 -4.76 6.82 -38.87 -0.27 -5.03 16 19 C -0.06 -1.18 5.50 -104.70 -0.58 -1.76 16 20 C 0.12 2.06 7.16 36.00 0.26 2.32 16 21 O -0.57 -9.66 13.64 -35.23 -0.48 -10.14 16 22 C -0.20 -4.01 9.33 -39.29 -0.37 -4.38 16 23 H 0.11 1.43 7.88 -51.93 -0.41 1.02 16 24 H 0.10 1.18 6.30 -51.93 -0.33 0.86 16 25 H 0.09 0.97 8.14 -51.94 -0.42 0.55 16 26 H 0.11 2.21 6.96 -52.48 -0.37 1.85 16 27 H 0.29 6.75 8.30 -40.82 -0.34 6.41 16 28 H 0.10 2.47 4.74 -52.49 -0.25 2.22 16 29 H 0.05 0.68 8.09 -51.93 -0.42 0.26 16 30 H 0.05 0.75 8.08 -51.92 -0.42 0.33 16 31 H 0.37 4.03 9.12 45.56 0.42 4.44 16 32 H 0.10 1.78 7.94 -52.49 -0.42 1.37 16 LS Contribution 289.35 15.07 4.36 4.36 Total: -1.00 -29.15 289.35 -6.12 -35.27 By element: Atomic # 1 Polarization: 8.25 SS G_CDS: -2.62 Total: 5.64 kcal Atomic # 6 Polarization: -17.07 SS G_CDS: -2.73 Total: -19.80 kcal Atomic # 7 Polarization: -20.84 SS G_CDS: 0.77 Total: -20.07 kcal Atomic # 8 Polarization: -17.92 SS G_CDS: -0.37 Total: -18.29 kcal Atomic # 14 Polarization: 20.86 SS G_CDS: -4.17 Total: 16.69 kcal Atomic # 17 Polarization: -2.44 SS G_CDS: -1.36 Total: -3.80 kcal Total LS contribution 4.36 Total: 4.36 kcal Total: -29.15 -6.12 -35.27 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000396041270.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -52.155 kcal (2) G-P(sol) polarization free energy of solvation -29.155 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -81.310 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.118 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.273 kcal (6) G-S(sol) free energy of system = (1) + (5) -87.429 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.13 seconds