Wall clock time and date at job start Mon Mar 30 2020 06:34:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 H 1.09006 * 109.47232 * 2 1 4 4 Cl 1.80302 * 109.47337 * 119.99989 * 2 1 3 5 5 C 1.50700 * 109.47427 * 240.00031 * 2 1 3 6 6 O 1.21343 * 119.99942 * 92.44777 * 5 2 1 7 7 C 1.46601 * 119.99620 * 272.45677 * 5 2 1 8 8 C 1.46653 * 120.59000 * 92.55847 * 7 5 2 9 9 C 1.40723 * 120.62262 * 359.96542 * 8 7 5 10 10 H 1.08004 * 119.99587 * 329.50799 * 9 8 7 11 11 C 1.40390 * 120.00119 * 149.50327 * 9 8 7 12 12 N 1.30567 * 119.99901 * 167.22182 * 11 9 8 13 13 Si 1.86791 * 120.00075 * 347.21743 * 11 9 8 14 14 H 1.48494 * 109.47167 * 92.60790 * 13 11 9 15 15 H 1.48499 * 109.47100 * 212.60596 * 13 11 9 16 16 H 1.48498 * 109.47264 * 332.60286 * 13 11 9 17 17 C 1.40797 * 118.75856 * 179.67840 * 8 7 5 18 18 C 1.37543 * 119.86186 * 0.63371 * 17 8 7 19 19 C 1.38680 * 121.22885 * 359.64774 * 18 17 8 20 20 C 1.38062 * 121.30517 * 359.97438 * 19 18 17 21 21 C 1.50690 * 119.98860 * 180.02562 * 20 19 18 22 22 O 1.42902 * 109.47356 * 0.02562 * 21 20 19 23 23 H 1.09003 * 109.47270 * 300.00186 * 1 2 3 24 24 H 1.08992 * 109.47194 * 179.97438 * 1 2 3 25 25 H 1.09001 * 109.47270 * 59.99844 * 1 2 3 26 26 H 0.96998 * 120.00392 * 180.02562 * 12 11 9 27 27 H 1.07998 * 120.06807 * 180.30809 * 17 8 7 28 28 H 1.08000 * 119.38576 * 179.66521 * 18 17 8 29 29 H 1.07999 * 119.34806 * 180.02562 * 19 18 17 30 30 H 1.08998 * 109.47211 * 120.02115 * 21 20 19 31 31 H 1.08997 * 109.47479 * 240.02265 * 21 20 19 32 32 H 0.96702 * 113.99808 * 180.02562 * 22 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 17 2.1310 -0.8499 1.4721 5 6 2.0324 -0.7104 -1.2304 6 8 2.2770 -0.0797 -2.2378 7 6 2.2254 -2.1635 -1.2103 8 6 1.1532 -3.0649 -1.6445 9 6 -0.0798 -2.5511 -2.0873 10 1 -0.4524 -1.6203 -1.6857 11 6 -0.8255 -3.2484 -3.0509 12 7 -2.0673 -2.9170 -3.2809 13 14 -0.0411 -4.6503 -4.0041 14 1 -0.3104 -5.9339 -3.3079 15 1 -0.6146 -4.6999 -5.3730 16 1 1.4252 -4.4314 -4.0894 17 6 1.3826 -4.4537 -1.6158 18 6 2.5911 -4.9392 -1.1734 19 6 3.6007 -4.0842 -0.7578 20 6 3.4319 -2.7141 -0.7727 21 6 4.5492 -1.8125 -0.3150 22 8 5.6694 -2.6060 0.0821 23 1 -0.3634 0.5139 0.8900 24 1 -0.3633 -1.0276 -0.0005 25 1 -0.3634 0.5139 -0.8900 26 1 -2.5827 -3.3989 -3.9465 27 1 0.6094 -5.1366 -1.9356 28 1 2.7568 -6.0062 -1.1496 29 1 4.5380 -4.4984 -0.4165 30 1 4.8423 -1.1535 -1.1322 31 1 4.2101 -1.2140 0.5305 32 1 6.4275 -2.0904 0.3895 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000396043924.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:34:22 Heat of formation + Delta-G solvation = -80.516095 kcal Electronic energy + Delta-G solvation = -18703.320577 eV Core-core repulsion = 15654.449771 eV Total energy + Delta-G solvation = -3048.870806 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 268.065 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -39.29050 -37.40675 -36.12211 -35.77912 -33.78527 -32.20193 -31.06534 -30.20637 -26.22010 -25.21862 -24.15622 -21.81862 -20.51776 -18.86659 -17.26809 -16.99394 -16.34878 -15.62147 -15.21282 -14.63041 -14.36533 -14.28917 -13.96501 -13.48913 -13.12520 -12.86307 -12.27354 -12.07557 -12.01457 -11.87722 -11.45714 -11.34727 -10.95469 -10.90577 -10.46868 -10.44181 -10.25016 -9.95028 -9.77575 -9.53517 -9.30314 -8.86934 -7.64347 -7.61672 -7.10664 -4.67079 2.11644 2.28792 2.58942 2.74805 3.04184 3.14631 3.26277 3.88171 4.32299 4.50910 4.62356 5.04657 5.15160 5.16424 5.57758 5.73901 5.82705 5.92613 5.96885 6.03664 6.16669 6.46409 6.50403 6.54083 6.68154 7.04784 7.18768 7.51908 7.54103 7.68440 7.89020 7.95211 8.01236 8.14874 8.44658 8.59275 9.89077 Molecular weight = 268.07amu Principal moments of inertia in cm(-1) A = 0.018200 B = 0.009742 C = 0.007378 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1538.053849 B = 2873.388603 C = 3794.343377 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C -0.049 4.049 3 H 0.113 0.887 4 Cl -0.156 7.156 5 C 0.442 3.558 6 O -0.450 6.450 7 C -0.267 4.267 8 C 0.131 3.869 9 C -0.447 4.447 10 H 0.101 0.899 11 C 0.087 3.913 12 N -0.796 5.796 13 Si 0.913 3.087 14 H -0.268 1.268 15 H -0.291 1.291 16 H -0.240 1.240 17 C -0.243 4.243 18 C -0.062 4.062 19 C -0.222 4.222 20 C -0.005 4.005 21 C 0.102 3.898 22 O -0.564 6.564 23 H 0.071 0.929 24 H 0.094 0.906 25 H 0.078 0.922 26 H 0.290 0.710 27 H 0.105 0.895 28 H 0.095 0.905 29 H 0.108 0.892 30 H 0.046 0.954 31 H 0.065 0.935 32 H 0.370 0.630 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.729 3.015 5.628 8.578 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.094 4.094 3 H 0.131 0.869 4 Cl -0.129 7.129 5 C 0.317 3.683 6 O -0.323 6.323 7 C -0.269 4.269 8 C 0.127 3.873 9 C -0.474 4.474 10 H 0.119 0.881 11 C -0.134 4.134 12 N -0.419 5.419 13 Si 0.740 3.260 14 H -0.194 1.194 15 H -0.218 1.218 16 H -0.163 1.163 17 C -0.262 4.262 18 C -0.080 4.080 19 C -0.241 4.241 20 C -0.005 4.005 21 C 0.025 3.975 22 O -0.368 6.368 23 H 0.090 0.910 24 H 0.113 0.887 25 H 0.097 0.903 26 H 0.100 0.900 27 H 0.122 0.878 28 H 0.114 0.886 29 H 0.126 0.874 30 H 0.064 0.936 31 H 0.083 0.917 32 H 0.216 0.784 Dipole moment (debyes) X Y Z Total from point charges 5.205 2.833 4.895 7.687 hybrid contribution 0.425 -0.184 -0.134 0.483 sum 5.631 2.649 4.761 7.835 Atomic orbital electron populations 1.22144 0.89968 1.05942 1.03084 1.24830 0.99728 0.98205 0.86623 0.86908 1.98705 1.89286 1.81705 1.43222 1.22102 0.70478 0.89511 0.86225 1.90513 1.38466 1.69665 1.33619 1.20343 0.95750 0.91561 1.19235 1.18327 0.90271 0.90149 0.88518 1.19661 1.00100 1.08462 1.19166 0.88109 1.26225 0.93751 0.97169 0.96284 1.69505 1.07716 1.37232 1.27406 0.86296 0.82330 0.80050 0.77340 1.19418 1.21835 1.16291 1.20962 0.98314 0.94843 1.12042 1.20642 0.93286 0.97752 0.96370 1.20001 0.99726 0.92130 1.12254 1.19029 0.91402 0.93964 0.96105 1.21272 0.85734 0.92310 0.98147 1.86511 1.25833 1.37083 1.87340 0.91042 0.88692 0.90344 0.89973 0.87778 0.88645 0.87369 0.93589 0.91682 0.78409 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.51 8.15 37.16 0.30 -2.20 16 2 C -0.05 -0.83 3.76 -27.88 -0.10 -0.93 16 3 H 0.11 1.60 8.14 -51.93 -0.42 1.18 16 4 Cl -0.16 -2.56 24.48 -51.86 -1.27 -3.83 16 5 C 0.44 9.27 3.96 -30.94 -0.12 9.15 16 6 O -0.45 -10.39 17.86 5.50 0.10 -10.29 16 7 C -0.27 -6.09 4.88 -102.60 -0.50 -6.59 16 8 C 0.13 3.22 5.32 -104.60 -0.56 2.66 16 9 C -0.45 -11.39 8.81 -37.83 -0.33 -11.72 16 10 H 0.10 2.56 4.76 -52.48 -0.25 2.31 16 11 C 0.09 2.19 5.48 -17.28 -0.09 2.09 16 12 N -0.80 -20.12 13.91 55.57 0.77 -19.34 16 13 Si 0.91 20.44 24.41 -169.99 -4.15 16.29 16 14 H -0.27 -5.74 6.66 56.52 0.38 -5.37 16 15 H -0.29 -6.30 7.11 56.52 0.40 -5.89 16 16 H -0.24 -5.62 6.67 56.52 0.38 -5.25 16 17 C -0.24 -5.73 7.03 -38.87 -0.27 -6.00 16 18 C -0.06 -1.35 9.97 -39.67 -0.40 -1.75 16 19 C -0.22 -4.81 9.34 -39.48 -0.37 -5.18 16 20 C 0.00 -0.10 5.34 -104.16 -0.56 -0.66 16 21 C 0.10 1.82 6.37 36.00 0.23 2.05 16 22 O -0.56 -9.04 12.11 -35.23 -0.43 -9.46 16 23 H 0.07 0.94 8.14 -51.93 -0.42 0.52 16 24 H 0.09 1.78 6.38 -51.93 -0.33 1.45 16 25 H 0.08 1.28 8.11 -51.93 -0.42 0.86 16 26 H 0.29 6.65 8.29 -40.82 -0.34 6.31 16 27 H 0.10 2.41 4.34 -52.49 -0.23 2.18 16 28 H 0.10 1.80 8.06 -52.49 -0.42 1.38 16 29 H 0.11 2.22 6.95 -52.49 -0.36 1.86 16 30 H 0.05 0.80 8.14 -51.93 -0.42 0.38 16 31 H 0.07 1.07 5.37 -51.93 -0.28 0.79 16 32 H 0.37 3.82 9.12 45.56 0.42 4.24 16 LS Contribution 277.43 15.07 4.18 4.18 Total: -1.00 -28.67 277.43 -5.90 -34.57 By element: Atomic # 1 Polarization: 9.30 SS G_CDS: -2.33 Total: 6.96 kcal Atomic # 6 Polarization: -16.31 SS G_CDS: -2.77 Total: -19.08 kcal Atomic # 7 Polarization: -20.12 SS G_CDS: 0.77 Total: -19.34 kcal Atomic # 8 Polarization: -19.43 SS G_CDS: -0.33 Total: -19.75 kcal Atomic # 14 Polarization: 20.44 SS G_CDS: -4.15 Total: 16.29 kcal Atomic # 17 Polarization: -2.56 SS G_CDS: -1.27 Total: -3.83 kcal Total LS contribution 4.18 Total: 4.18 kcal Total: -28.67 -5.90 -34.57 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000396043924.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -45.944 kcal (2) G-P(sol) polarization free energy of solvation -28.672 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -74.616 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.900 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.572 kcal (6) G-S(sol) free energy of system = (1) + (5) -80.516 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds