Wall clock time and date at job start Mon Mar 30 2020 06:35:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.52994 * 109.47106 * 2 1 4 4 C 1.53000 * 109.46644 * 120.00175 * 2 1 3 5 5 N 1.46896 * 109.47317 * 65.00060 * 4 2 1 6 6 C 1.46898 * 110.99765 * 193.95068 * 5 4 2 7 7 C 1.50693 * 109.47368 * 71.80856 * 6 5 4 8 8 H 1.07998 * 120.00227 * 359.97438 * 7 6 5 9 9 C 1.37878 * 120.00231 * 179.97438 * 7 6 5 10 10 N 1.31512 * 120.00162 * 179.97438 * 9 7 6 11 11 Si 1.86802 * 120.00024 * 0.02562 * 9 7 6 12 12 H 1.48493 * 109.47190 * 89.99894 * 11 9 7 13 13 H 1.48497 * 109.47067 * 209.99854 * 11 9 7 14 14 H 1.48505 * 109.47044 * 329.99776 * 11 9 7 15 15 C 1.39069 * 111.00116 * 69.99940 * 5 4 2 16 16 N 1.32397 * 119.71694 * 57.51437 * 15 5 4 17 17 C 1.31955 * 121.63791 * 180.02562 * 16 15 5 18 18 C 1.38050 * 120.87772 * 359.97438 * 17 16 15 19 19 C 1.38843 * 119.33862 * 0.28689 * 18 17 16 20 20 C 1.38424 * 118.49177 * 359.42842 * 19 18 17 21 21 Cl 1.73604 * 120.46039 * 180.26176 * 20 19 18 22 22 H 1.09002 * 109.47059 * 59.99853 * 1 2 3 23 23 H 1.09004 * 109.47350 * 179.97438 * 1 2 3 24 24 H 1.09000 * 109.46857 * 300.00065 * 1 2 3 25 25 H 1.09000 * 109.46857 * 239.99935 * 2 1 3 26 26 H 1.09000 * 109.46970 * 179.97438 * 3 2 1 27 27 H 1.09002 * 109.47282 * 300.00010 * 3 2 1 28 28 H 1.09000 * 109.47315 * 60.00216 * 3 2 1 29 29 H 1.08996 * 109.47619 * 304.99349 * 4 2 1 30 30 H 1.09010 * 109.46435 * 184.99954 * 4 2 1 31 31 H 1.09006 * 109.47148 * 191.80564 * 6 5 4 32 32 H 1.09003 * 109.47278 * 311.80406 * 6 5 4 33 33 H 0.97001 * 120.00104 * 180.02562 * 10 9 7 34 34 H 1.07995 * 119.56117 * 180.02562 * 17 16 15 35 35 H 1.08004 * 120.33163 * 180.02562 * 18 17 16 36 36 H 1.08006 * 120.75460 * 179.72025 * 19 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 2.0399 -0.7213 1.2493 5 7 1.6513 -2.1367 1.1904 6 6 1.8245 -2.7849 2.4972 7 6 0.7647 -2.2905 3.4476 8 1 0.0356 -1.5668 3.1144 9 6 0.7257 -2.7621 4.7426 10 7 -0.1989 -2.3302 5.5722 11 14 1.9871 -4.0133 5.3194 12 1 3.1678 -3.3055 5.8761 13 1 1.3859 -4.8746 6.3691 14 1 2.4104 -4.8548 4.1712 15 6 2.3634 -2.8084 0.2026 16 7 3.6868 -2.8191 0.2400 17 6 4.4001 -3.4439 -0.6776 18 6 3.7867 -4.1142 -1.7169 19 6 2.4005 -4.1232 -1.7966 20 6 1.6785 -3.4644 -0.8164 21 17 -0.0568 -3.4488 -0.8623 22 1 -0.3633 0.5139 -0.8900 23 1 -0.3634 -1.0277 -0.0005 24 1 -0.3633 0.5138 0.8900 25 1 1.8933 -0.5138 -0.8900 26 1 3.1300 1.4424 0.0005 27 1 1.6767 1.9563 -0.8900 28 1 1.6767 1.9563 0.8900 29 1 1.6054 -0.2618 2.1370 30 1 3.1263 -0.6444 1.2951 31 1 1.7337 -3.8650 2.3819 32 1 2.8103 -2.5435 2.8947 33 1 -0.2260 -2.6617 6.4834 34 1 5.4781 -3.4314 -0.6143 35 1 4.3791 -4.6230 -2.4630 36 1 1.8970 -4.6366 -2.6024 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000043419791.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:35:08 Heat of formation + Delta-G solvation = 31.586154 kcal Electronic energy + Delta-G solvation = -18881.611624 eV Core-core repulsion = 16005.727782 eV Total energy + Delta-G solvation = -2875.883842 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 268.104 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -40.31142 -37.19034 -36.16370 -34.22396 -32.54815 -31.96300 -30.00968 -27.57167 -26.64048 -25.13916 -23.39508 -22.65899 -20.69357 -19.57133 -17.24034 -16.56783 -16.46320 -15.70735 -15.34394 -14.46017 -14.27513 -13.82728 -13.51157 -13.33867 -13.25677 -12.53889 -12.35108 -12.24787 -11.91108 -11.75496 -11.52555 -11.29417 -10.91282 -10.84744 -10.74527 -10.31751 -10.19885 -10.10836 -9.87009 -9.56189 -9.47596 -9.22855 -8.57628 -8.48268 -7.74032 -6.04775 -4.01966 1.12496 1.27069 2.45436 3.29658 3.36807 3.40556 3.80774 4.19327 4.42972 4.73136 4.84279 5.05676 5.17447 5.28173 5.39015 5.42650 5.45145 5.70449 5.89978 5.99548 6.04117 6.10932 6.13785 6.32437 6.35879 6.46885 6.55363 6.59640 6.78400 6.89653 6.91093 7.02117 7.57100 7.71682 8.00863 8.08523 8.62669 9.04800 9.56326 11.07943 Molecular weight = 268.10amu Principal moments of inertia in cm(-1) A = 0.015206 B = 0.008138 C = 0.007005 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1840.913317 B = 3439.727042 C = 3996.286255 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C -0.089 4.089 3 C -0.143 4.143 4 C 0.070 3.930 5 N -0.472 5.472 6 C 0.175 3.825 7 C -0.505 4.505 8 H 0.085 0.915 9 C 0.072 3.928 10 N -0.897 5.897 11 Si 0.870 3.130 12 H -0.276 1.276 13 H -0.285 1.285 14 H -0.269 1.269 15 C 0.329 3.671 16 N -0.500 5.500 17 C 0.107 3.893 18 C -0.182 4.182 19 C -0.071 4.071 20 C -0.067 4.067 21 Cl -0.036 7.036 22 H 0.036 0.964 23 H 0.075 0.925 24 H 0.053 0.947 25 H 0.052 0.948 26 H 0.048 0.952 27 H 0.049 0.951 28 H 0.057 0.943 29 H 0.096 0.904 30 H 0.039 0.961 31 H 0.024 0.976 32 H 0.000 1.000 33 H 0.264 0.736 34 H 0.154 0.846 35 H 0.138 0.862 36 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.444 -0.618 -15.724 17.004 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.198 4.198 2 C -0.108 4.108 3 C -0.201 4.201 4 C -0.057 4.057 5 N -0.195 5.195 6 C 0.050 3.950 7 C -0.544 4.544 8 H 0.103 0.897 9 C -0.130 4.130 10 N -0.536 5.536 11 Si 0.698 3.302 12 H -0.202 1.202 13 H -0.211 1.211 14 H -0.194 1.194 15 C 0.099 3.901 16 N -0.212 5.212 17 C -0.051 4.051 18 C -0.203 4.203 19 C -0.098 4.098 20 C -0.098 4.098 21 Cl -0.007 7.007 22 H 0.055 0.945 23 H 0.094 0.906 24 H 0.072 0.928 25 H 0.070 0.930 26 H 0.067 0.933 27 H 0.069 0.931 28 H 0.076 0.924 29 H 0.114 0.886 30 H 0.058 0.942 31 H 0.042 0.958 32 H 0.018 0.982 33 H 0.074 0.926 34 H 0.172 0.828 35 H 0.155 0.845 36 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges 6.125 -0.213 -14.934 16.142 hybrid contribution 0.982 -1.216 -0.065 1.564 sum 7.107 -1.428 -14.999 16.659 Atomic orbital electron populations 1.21790 0.94444 1.03443 1.00117 1.21068 0.97010 0.95034 0.97717 1.21786 1.00360 0.96431 1.01512 1.22187 0.98097 0.86552 0.98880 1.60321 1.50321 1.02387 1.06510 1.20178 0.96681 0.94268 0.83837 1.20942 1.13461 1.25995 0.93972 0.89659 1.24818 0.95440 0.96165 0.96537 1.69877 1.33783 1.44019 1.05929 0.86936 0.82131 0.82293 0.78866 1.20199 1.21108 1.19369 1.20194 0.86357 0.91501 0.92044 1.68099 1.07819 1.19015 1.26312 1.22650 1.00192 0.92541 0.89743 1.21996 0.94370 1.02827 1.01059 1.21457 0.94008 0.96903 0.97393 1.21802 0.87140 1.03076 0.97755 1.98368 1.07337 1.97030 1.97966 0.94512 0.90572 0.92798 0.92958 0.93324 0.93146 0.92397 0.88586 0.94230 0.95784 0.98248 0.92640 0.82840 0.84464 0.84117 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.34 9.08 37.16 0.34 -2.00 16 2 C -0.09 -1.47 2.90 -90.62 -0.26 -1.73 16 3 C -0.14 -1.99 9.19 37.15 0.34 -1.65 16 4 C 0.07 1.36 4.14 -3.83 -0.02 1.34 16 5 N -0.47 -10.01 3.27 -174.52 -0.57 -10.58 16 6 C 0.17 4.33 3.64 -4.98 -0.02 4.31 16 7 C -0.51 -14.19 8.95 -34.44 -0.31 -14.50 16 8 H 0.09 2.58 7.86 -52.49 -0.41 2.17 16 9 C 0.07 2.08 5.47 -17.82 -0.10 1.99 16 10 N -0.90 -27.28 13.96 55.43 0.77 -26.51 16 11 Si 0.87 21.82 27.47 -169.99 -4.67 17.15 16 12 H -0.28 -6.82 7.11 56.52 0.40 -6.42 16 13 H -0.29 -7.06 7.11 56.52 0.40 -6.66 16 14 H -0.27 -6.63 6.54 56.52 0.37 -6.26 16 15 C 0.33 6.22 4.24 -154.93 -0.66 5.57 16 16 N -0.50 -8.95 9.49 -12.40 -0.12 -9.07 16 17 C 0.11 1.46 11.17 -17.57 -0.20 1.26 16 18 C -0.18 -2.09 10.10 -39.43 -0.40 -2.49 16 19 C -0.07 -0.91 9.97 -39.29 -0.39 -1.30 16 20 C -0.07 -1.11 6.36 -39.15 -0.25 -1.36 16 21 Cl -0.04 -0.60 26.91 -51.86 -1.40 -1.99 16 22 H 0.04 0.53 8.14 -51.93 -0.42 0.11 16 23 H 0.08 1.39 6.10 -51.93 -0.32 1.07 16 24 H 0.05 0.93 8.14 -51.93 -0.42 0.51 16 25 H 0.05 0.88 7.39 -51.93 -0.38 0.50 16 26 H 0.05 0.65 8.14 -51.93 -0.42 0.22 16 27 H 0.05 0.62 8.14 -51.93 -0.42 0.20 16 28 H 0.06 0.80 8.14 -51.93 -0.42 0.38 16 29 H 0.10 2.07 7.06 -51.93 -0.37 1.70 16 30 H 0.04 0.78 7.51 -51.92 -0.39 0.39 16 31 H 0.02 0.63 7.03 -51.93 -0.37 0.26 16 32 H 0.00 -0.01 7.48 -51.93 -0.39 -0.40 16 33 H 0.26 7.54 8.31 -40.82 -0.34 7.20 16 34 H 0.15 1.58 8.06 -52.49 -0.42 1.16 16 35 H 0.14 1.07 8.06 -52.48 -0.42 0.64 16 36 H 0.14 1.40 8.06 -52.48 -0.42 0.98 16 LS Contribution 310.69 15.07 4.68 4.68 Total: -1.00 -30.77 310.69 -8.39 -39.16 By element: Atomic # 1 Polarization: 2.91 SS G_CDS: -5.17 Total: -2.27 kcal Atomic # 6 Polarization: -8.66 SS G_CDS: -1.92 Total: -10.57 kcal Atomic # 7 Polarization: -46.24 SS G_CDS: 0.08 Total: -46.16 kcal Atomic # 14 Polarization: 21.82 SS G_CDS: -4.67 Total: 17.15 kcal Atomic # 17 Polarization: -0.60 SS G_CDS: -1.40 Total: -1.99 kcal Total LS contribution 4.68 Total: 4.68 kcal Total: -30.77 -8.39 -39.16 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000043419791.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 70.742 kcal (2) G-P(sol) polarization free energy of solvation -30.771 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 39.971 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.385 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.156 kcal (6) G-S(sol) free energy of system = (1) + (5) 31.586 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds