Wall clock time and date at job start Mon Mar 30 2020 06:42:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 H 1.08993 * 109.47675 * 2 1 4 4 N 1.46900 * 109.47112 * 120.00217 * 2 1 3 5 5 C 1.50704 * 109.46972 * 239.99804 * 2 1 3 6 6 C 1.38289 * 119.92336 * 100.00170 * 5 2 1 7 7 C 1.38116 * 120.09763 * 179.97438 * 6 5 2 8 8 C 1.38885 * 119.93646 * 0.02676 * 7 6 5 9 9 N 1.39743 * 120.07612 * 179.97438 * 8 7 6 10 10 C 1.46901 * 111.00305 * 296.04555 * 9 8 7 11 11 C 1.46906 * 111.00121 * 59.99984 * 9 8 7 12 12 C 1.50696 * 109.47351 * 169.99853 * 11 9 8 13 13 H 1.08007 * 119.99780 * 0.02562 * 12 11 9 14 14 C 1.37878 * 120.00506 * 180.02562 * 12 11 9 15 15 N 1.31510 * 120.00248 * 180.02562 * 14 12 11 16 16 Si 1.86802 * 119.99357 * 359.97438 * 14 12 11 17 17 H 1.48499 * 109.46811 * 90.00524 * 16 14 12 18 18 H 1.48502 * 109.46643 * 209.99901 * 16 14 12 19 19 H 1.48499 * 109.47300 * 329.99977 * 16 14 12 20 20 C 1.38987 * 119.84136 * 0.26942 * 8 7 6 21 21 Cl 1.73599 * 120.04375 * 179.70613 * 20 8 7 22 22 C 1.38206 * 119.90792 * 359.43323 * 20 8 7 23 23 H 1.09002 * 109.46661 * 300.00173 * 1 2 3 24 24 H 1.09006 * 109.46752 * 59.99790 * 1 2 3 25 25 H 1.08990 * 109.47219 * 180.02562 * 1 2 3 26 26 H 1.00902 * 111.00508 * 176.04453 * 4 2 1 27 27 H 1.00902 * 111.00032 * 299.99803 * 4 2 1 28 28 H 1.08007 * 119.95202 * 0.02563 * 6 5 2 29 29 H 1.07996 * 120.02931 * 179.97438 * 7 6 5 30 30 H 1.09002 * 109.47401 * 183.95424 * 10 9 8 31 31 H 1.09001 * 109.46874 * 63.95437 * 10 9 8 32 32 H 1.09004 * 109.46970 * 303.95570 * 10 9 8 33 33 H 1.08997 * 109.46995 * 289.99833 * 11 9 8 34 34 H 1.09001 * 109.46848 * 49.99839 * 11 9 8 35 35 H 0.96999 * 119.99895 * 180.02562 * 15 14 12 36 36 H 1.08004 * 119.97292 * 180.27325 * 22 20 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0276 0.0000 4 7 2.0197 -0.6925 1.1994 5 6 2.0323 -0.7105 -1.2305 6 6 2.4585 0.0212 -2.3238 7 6 2.9200 -0.6262 -3.4532 8 6 2.9555 -2.0141 -3.4907 9 7 3.4214 -2.6722 -4.6321 10 6 2.5514 -2.4059 -5.7854 11 6 4.8119 -2.2990 -4.9243 12 6 5.3583 -3.2003 -6.0012 13 1 4.7348 -3.9730 -6.4265 14 6 6.6541 -3.0388 -6.4438 15 7 7.1307 -3.8251 -7.3840 16 14 7.7321 -1.7020 -5.7087 17 1 8.4637 -2.2452 -4.5361 18 1 8.7067 -1.2361 -6.7277 19 1 6.8831 -0.5623 -5.2781 20 6 2.5208 -2.7470 -2.3927 21 17 2.5557 -4.4821 -2.4368 22 6 2.0660 -2.0924 -1.2636 23 1 -0.3633 0.5139 0.8900 24 1 -0.3633 0.5139 -0.8900 25 1 -0.3633 -1.0276 0.0005 26 1 3.0262 -0.7627 1.1910 27 1 1.6962 -0.2350 2.0385 28 1 2.4312 1.1005 -2.2943 29 1 3.2522 -0.0538 -4.3066 30 1 2.8962 -2.9851 -6.6420 31 1 2.5846 -1.3437 -6.0279 32 1 1.5279 -2.6912 -5.5420 33 1 4.8464 -1.2641 -5.2645 34 1 5.4138 -2.4050 -4.0217 35 1 8.0425 -3.7117 -7.6951 36 1 1.7320 -2.6609 -0.4081 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000061694379.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:42:23 Heat of formation + Delta-G solvation = 24.726743 kcal Electronic energy + Delta-G solvation = -18206.739840 eV Core-core repulsion = 15330.558552 eV Total energy + Delta-G solvation = -2876.181288 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 268.104 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -39.78551 -37.21481 -35.96456 -34.74019 -32.47049 -30.57456 -29.77766 -28.67279 -27.72025 -25.17456 -23.09907 -22.29372 -21.06044 -19.82516 -17.19243 -16.61790 -16.04200 -15.60950 -15.15315 -14.70774 -14.48163 -14.14991 -13.83054 -13.58155 -13.20202 -12.81551 -12.60851 -12.31609 -12.16459 -12.01561 -11.60107 -11.34305 -11.25701 -11.14645 -10.91260 -10.61932 -10.54113 -10.22622 -9.94834 -9.34674 -8.95848 -8.59445 -8.58404 -8.18920 -7.61149 -6.07044 -4.04718 1.36593 1.46143 2.67565 3.26925 3.34005 3.35345 3.76027 4.27783 4.39648 4.51250 4.68114 4.99640 5.12356 5.19202 5.23041 5.24701 5.55265 5.58571 5.65978 5.77639 5.98055 6.01879 6.09305 6.12323 6.27761 6.50006 6.55738 6.65511 6.79855 6.82987 6.93463 7.01516 7.21725 7.56558 7.76357 8.06303 8.62801 9.01700 9.53764 11.05884 Molecular weight = 268.10amu Principal moments of inertia in cm(-1) A = 0.023331 B = 0.005530 C = 0.005090 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1199.842484 B = 5061.746361 C = 5499.592887 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C 0.134 3.866 3 H 0.042 0.958 4 N -0.844 5.844 5 C -0.096 4.096 6 C -0.106 4.106 7 C -0.144 4.144 8 C 0.119 3.881 9 N -0.497 5.497 10 C 0.045 3.955 11 C 0.170 3.830 12 C -0.509 4.509 13 H 0.084 0.916 14 C 0.071 3.929 15 N -0.898 5.898 16 Si 0.871 3.129 17 H -0.275 1.275 18 H -0.285 1.285 19 H -0.268 1.268 20 C -0.022 4.022 21 Cl -0.055 7.055 22 C -0.083 4.083 23 H 0.054 0.946 24 H 0.061 0.939 25 H 0.066 0.934 26 H 0.345 0.655 27 H 0.341 0.659 28 H 0.119 0.881 29 H 0.127 0.873 30 H 0.086 0.914 31 H 0.018 0.982 32 H 0.050 0.950 33 H -0.007 1.007 34 H 0.025 0.975 35 H 0.264 0.736 36 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.038 8.998 14.469 20.862 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.199 4.199 2 C 0.023 3.977 3 H 0.060 0.940 4 N -0.375 5.375 5 C -0.097 4.097 6 C -0.126 4.126 7 C -0.165 4.165 8 C 0.024 3.976 9 N -0.218 5.218 10 C -0.102 4.102 11 C 0.046 3.954 12 C -0.547 4.547 13 H 0.102 0.898 14 C -0.131 4.131 15 N -0.537 5.537 16 Si 0.698 3.302 17 H -0.201 1.201 18 H -0.211 1.211 19 H -0.193 1.193 20 C -0.050 4.050 21 Cl -0.025 7.025 22 C -0.102 4.102 23 H 0.073 0.927 24 H 0.080 0.920 25 H 0.085 0.915 26 H 0.158 0.842 27 H 0.154 0.846 28 H 0.137 0.863 29 H 0.145 0.855 30 H 0.105 0.895 31 H 0.036 0.964 32 H 0.069 0.931 33 H 0.011 0.989 34 H 0.043 0.957 35 H 0.074 0.926 36 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -12.288 7.661 14.136 20.236 hybrid contribution 1.359 2.327 0.305 2.712 sum -10.928 9.988 14.440 20.681 Atomic orbital electron populations 1.21820 0.93683 1.02939 1.01465 1.20127 0.95484 0.94096 0.87998 0.94025 1.58718 1.16751 1.58324 1.03719 1.19576 1.01633 0.93177 0.95337 1.20901 0.99131 0.99442 0.93077 1.21716 1.01061 0.94721 0.98967 1.19003 0.95457 0.90070 0.93092 1.59702 1.04428 1.56120 1.01514 1.22264 0.95270 0.98872 0.93802 1.20242 0.83155 0.94932 0.97105 1.20975 0.98186 1.16960 1.18558 0.89841 1.24849 0.97565 0.95831 0.94808 1.69882 1.16319 1.38485 1.28975 0.86922 0.80944 0.82951 0.79335 1.20057 1.21107 1.19332 1.21015 1.03384 0.85512 0.95063 1.98356 1.96938 1.08709 1.98538 1.20802 0.99114 0.93792 0.96533 0.92715 0.92037 0.91509 0.84155 0.84643 0.86290 0.85524 0.89495 0.96362 0.93115 0.98935 0.95735 0.92604 0.84329 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.23 9.46 37.16 0.35 -0.87 16 2 C 0.13 1.29 3.57 -68.86 -0.25 1.04 16 3 H 0.04 0.37 8.00 -51.93 -0.42 -0.05 16 4 N -0.84 -7.33 8.48 -5.65 -0.05 -7.37 16 5 C -0.10 -1.22 4.89 -104.59 -0.51 -1.73 16 6 C -0.11 -1.42 9.66 -39.61 -0.38 -1.80 16 7 C -0.14 -2.35 8.71 -39.39 -0.34 -2.70 16 8 C 0.12 2.22 4.67 -83.73 -0.39 1.83 16 9 N -0.50 -10.62 4.12 -180.28 -0.74 -11.37 16 10 C 0.04 0.86 9.09 60.07 0.55 1.40 16 11 C 0.17 4.16 3.37 -4.97 -0.02 4.14 16 12 C -0.51 -14.40 9.07 -34.44 -0.31 -14.71 16 13 H 0.08 2.57 7.35 -52.48 -0.39 2.18 16 14 C 0.07 2.06 5.47 -17.82 -0.10 1.96 16 15 N -0.90 -27.41 13.96 55.43 0.77 -26.64 16 16 Si 0.87 21.50 27.47 -169.99 -4.67 16.83 16 17 H -0.27 -6.73 7.11 56.52 0.40 -6.33 16 18 H -0.29 -6.94 7.11 56.52 0.40 -6.54 16 19 H -0.27 -6.37 6.54 56.52 0.37 -6.00 16 20 C -0.02 -0.38 6.34 -39.32 -0.25 -0.63 16 21 Cl -0.05 -0.96 28.44 -51.86 -1.47 -2.44 16 22 C -0.08 -1.19 9.10 -39.58 -0.36 -1.55 16 23 H 0.05 0.39 8.14 -51.93 -0.42 -0.04 16 24 H 0.06 0.52 8.14 -51.93 -0.42 0.10 16 25 H 0.07 0.65 8.14 -51.93 -0.42 0.22 16 26 H 0.35 2.99 8.99 -39.29 -0.35 2.63 16 27 H 0.34 2.22 9.04 -39.29 -0.36 1.87 16 28 H 0.12 1.29 8.03 -52.48 -0.42 0.87 16 29 H 0.13 2.06 7.17 -52.49 -0.38 1.68 16 30 H 0.09 1.82 6.86 -51.93 -0.36 1.46 16 31 H 0.02 0.33 7.48 -51.93 -0.39 -0.06 16 32 H 0.05 0.87 8.13 -51.93 -0.42 0.45 16 33 H -0.01 -0.17 6.54 -51.93 -0.34 -0.51 16 34 H 0.02 0.62 7.48 -51.93 -0.39 0.23 16 35 H 0.26 7.55 8.31 -40.82 -0.34 7.21 16 36 H 0.14 1.86 7.71 -52.48 -0.40 1.46 16 LS Contribution 312.10 15.07 4.70 4.70 Total: -1.00 -30.54 312.10 -8.51 -39.05 By element: Atomic # 1 Polarization: 5.88 SS G_CDS: -5.04 Total: 0.84 kcal Atomic # 6 Polarization: -11.60 SS G_CDS: -2.01 Total: -13.61 kcal Atomic # 7 Polarization: -45.36 SS G_CDS: -0.02 Total: -45.38 kcal Atomic # 14 Polarization: 21.50 SS G_CDS: -4.67 Total: 16.83 kcal Atomic # 17 Polarization: -0.96 SS G_CDS: -1.47 Total: -2.44 kcal Total LS contribution 4.70 Total: 4.70 kcal Total: -30.54 -8.51 -39.05 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000061694379.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 63.774 kcal (2) G-P(sol) polarization free energy of solvation -30.538 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 33.236 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.509 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.047 kcal (6) G-S(sol) free energy of system = (1) + (5) 24.727 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds