Wall clock time and date at job start Mon Mar 30 2020 06:41:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 C 1.52996 * 109.47694 * 2 1 4 4 N 1.46905 * 109.46779 * 120.00307 * 2 1 3 5 5 C 1.46896 * 110.99770 * 293.48725 * 4 2 1 6 6 C 1.50700 * 109.47451 * 160.13341 * 5 4 2 7 7 H 1.08005 * 119.99364 * 4.87010 * 6 5 4 8 8 C 1.37876 * 120.00366 * 184.87135 * 6 5 4 9 9 N 1.31513 * 119.99971 * 179.97438 * 8 6 5 10 10 Si 1.86797 * 120.00006 * 0.02562 * 8 6 5 11 11 H 1.48499 * 109.47431 * 90.00046 * 10 8 6 12 12 H 1.48504 * 109.47135 * 209.99971 * 10 8 6 13 13 H 1.48496 * 109.47129 * 329.99890 * 10 8 6 14 14 C 1.46899 * 110.99828 * 169.53313 * 4 2 1 15 15 C 1.50689 * 109.47226 * 293.95148 * 14 4 2 16 16 C 1.38195 * 119.61089 * 95.00512 * 15 14 4 17 17 C 1.38667 * 119.19162 * 180.02562 * 16 15 14 18 18 C 1.38608 * 118.43999 * 0.27488 * 17 16 15 19 19 C 1.38357 * 119.14628 * 359.45172 * 18 17 16 20 20 Cl 1.73601 * 119.63263 * 180.25418 * 19 18 17 21 21 N 1.31874 * 119.61249 * 275.01901 * 15 14 4 22 22 H 1.09000 * 109.46847 * 301.00744 * 1 2 3 23 23 H 1.09003 * 109.46434 * 60.99720 * 1 2 3 24 24 H 1.08995 * 109.47232 * 181.00175 * 1 2 3 25 25 H 1.08999 * 109.47159 * 239.99505 * 2 1 3 26 26 H 1.08993 * 109.47113 * 179.97438 * 3 2 1 27 27 H 1.09000 * 109.47030 * 300.00608 * 3 2 1 28 28 H 1.09006 * 109.46861 * 59.99650 * 3 2 1 29 29 H 1.08999 * 109.47417 * 280.13357 * 5 4 2 30 30 H 1.09005 * 109.47290 * 40.13343 * 5 4 2 31 31 H 0.97002 * 120.00406 * 179.97438 * 9 8 6 32 32 H 1.08997 * 109.46755 * 173.94743 * 14 4 2 33 33 H 1.09002 * 109.46964 * 53.95450 * 14 4 2 34 34 H 1.07998 * 120.40093 * 359.97438 * 16 15 14 35 35 H 1.08000 * 120.77952 * 179.97438 * 17 16 15 36 36 H 1.07992 * 120.42339 * 179.72411 * 18 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0402 1.4424 0.0000 4 7 2.0197 -0.6926 1.1995 5 6 1.6798 0.0574 2.4159 6 6 1.7417 -0.8632 3.6075 7 1 2.0828 -1.8808 3.4864 8 6 1.3629 -0.4064 4.8520 9 7 1.4165 -1.2100 5.8917 10 14 0.7723 1.3533 5.0612 11 1 -0.6990 1.4081 4.8676 12 1 1.1099 1.8298 6.4266 13 1 1.4365 2.2212 4.0557 14 6 3.4666 -0.9318 1.1154 15 6 3.7512 -1.9033 -0.0007 16 6 4.0889 -1.4253 -1.2526 17 6 4.3485 -2.3271 -2.2735 18 6 4.2527 -3.6820 -1.9976 19 6 3.9148 -4.0870 -0.7186 20 17 3.7977 -5.7810 -0.3574 21 7 3.6747 -3.1998 0.2285 22 1 -0.3633 0.5294 0.8808 23 1 -0.3632 0.4983 -0.8989 24 1 -0.3633 -1.0274 0.0180 25 1 1.8934 -0.5139 -0.8899 26 1 3.1301 1.4423 0.0005 27 1 1.6768 1.9563 -0.8899 28 1 1.6768 1.9563 0.8900 29 1 2.3898 0.8734 2.5500 30 1 0.6726 0.4638 2.3228 31 1 1.1504 -0.8886 6.7674 32 1 3.8214 -1.3476 2.0584 33 1 3.9795 0.0094 0.9175 34 1 4.1492 -0.3623 -1.4337 35 1 4.6143 -1.9817 -3.2617 36 1 4.4436 -4.4122 -2.7700 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000072686371.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:41:22 Heat of formation + Delta-G solvation = 34.892475 kcal Electronic energy + Delta-G solvation = -18480.957479 eV Core-core repulsion = 15605.217010 eV Total energy + Delta-G solvation = -2875.740469 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 268.104 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -40.30382 -37.85544 -36.48443 -32.84655 -32.66809 -31.98313 -30.57231 -27.82570 -26.78815 -25.18982 -23.46242 -22.06375 -21.96395 -18.73017 -17.04551 -17.02097 -16.32688 -15.75786 -15.30633 -14.61712 -14.24573 -14.04620 -13.72242 -13.46203 -13.33272 -12.70532 -12.52568 -12.21922 -11.82610 -11.70852 -11.57791 -11.32801 -11.20047 -11.04557 -10.88919 -10.70938 -10.43218 -10.11184 -9.87142 -9.82671 -9.32356 -9.23716 -8.79053 -8.50829 -7.37229 -5.98891 -3.95422 0.96934 1.22769 1.91961 3.29473 3.37332 3.37447 3.68144 4.43228 4.45115 4.65086 4.82235 4.96494 4.99734 5.22293 5.28207 5.32997 5.47392 5.54517 5.68111 5.77131 5.89215 5.97425 6.04609 6.12937 6.15804 6.25385 6.37211 6.55051 6.60122 6.68384 6.85120 6.92826 7.65208 7.88915 7.94213 8.04878 8.71356 9.15381 9.62447 11.14540 Molecular weight = 268.10amu Principal moments of inertia in cm(-1) A = 0.019795 B = 0.005893 C = 0.004913 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1414.153852 B = 4749.947729 C = 5697.522698 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.140 4.140 2 C 0.067 3.933 3 C -0.186 4.186 4 N -0.508 5.508 5 C 0.163 3.837 6 C -0.506 4.506 7 H 0.084 0.916 8 C 0.068 3.932 9 N -0.899 5.899 10 Si 0.870 3.130 11 H -0.276 1.276 12 H -0.287 1.287 13 H -0.269 1.269 14 C 0.103 3.897 15 C 0.177 3.823 16 C -0.172 4.172 17 C -0.066 4.066 18 C -0.169 4.169 19 C 0.179 3.821 20 Cl -0.039 7.039 21 N -0.451 5.451 22 H 0.059 0.941 23 H 0.047 0.953 24 H 0.061 0.939 25 H 0.070 0.930 26 H 0.051 0.949 27 H 0.052 0.948 28 H 0.061 0.939 29 H -0.009 1.009 30 H 0.031 0.969 31 H 0.262 0.738 32 H 0.107 0.893 33 H 0.046 0.954 34 H 0.138 0.862 35 H 0.141 0.859 36 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.440 0.239 -18.125 18.925 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.198 4.198 2 C -0.042 4.042 3 C -0.245 4.245 4 N -0.232 5.232 5 C 0.038 3.962 6 C -0.544 4.544 7 H 0.102 0.898 8 C -0.133 4.133 9 N -0.539 5.539 10 Si 0.698 3.302 11 H -0.202 1.202 12 H -0.213 1.213 13 H -0.194 1.194 14 C -0.026 4.026 15 C 0.038 3.962 16 C -0.193 4.193 17 C -0.091 4.091 18 C -0.190 4.190 19 C 0.014 3.986 20 Cl -0.011 7.011 21 N -0.162 5.162 22 H 0.078 0.922 23 H 0.066 0.934 24 H 0.080 0.920 25 H 0.088 0.912 26 H 0.070 0.930 27 H 0.071 0.929 28 H 0.080 0.920 29 H 0.009 0.991 30 H 0.049 0.951 31 H 0.072 0.928 32 H 0.125 0.875 33 H 0.064 0.936 34 H 0.156 0.844 35 H 0.158 0.842 36 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 4.923 -0.668 -17.005 17.716 hybrid contribution 0.209 1.793 -0.580 1.896 sum 5.132 1.125 -17.585 18.353 Atomic orbital electron populations 1.21807 0.94700 1.02374 1.00894 1.21787 0.96021 0.91889 0.94525 1.22507 1.00988 0.98949 1.02068 1.62141 1.10719 1.48168 1.02189 1.20223 0.95321 0.93021 0.87656 1.21101 1.43548 0.99920 0.89842 0.89812 1.24887 0.95543 0.96896 0.95950 1.69899 1.48802 1.35435 0.99720 0.86947 0.79584 0.86158 0.77545 1.20227 1.21259 1.19373 1.21005 0.90687 0.93965 0.96916 1.21366 0.91258 0.89518 0.94078 1.22133 1.02030 1.01338 0.93773 1.21487 0.95948 0.92147 0.99566 1.21743 1.03941 0.97167 0.96163 1.21674 0.98615 0.87905 0.90370 1.98397 1.96293 1.10686 1.95712 1.66906 1.12457 1.02367 1.34473 0.92158 0.93359 0.92007 0.91210 0.92988 0.92918 0.91964 0.99144 0.95146 0.92766 0.87455 0.93621 0.84429 0.84159 0.84205 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.25 9.15 37.16 0.34 -1.91 16 2 C 0.07 1.10 2.74 -67.71 -0.19 0.91 16 3 C -0.19 -2.70 8.53 37.16 0.32 -2.38 16 4 N -0.51 -10.35 4.36 -229.52 -1.00 -11.35 16 5 C 0.16 3.84 2.39 -4.98 -0.01 3.83 16 6 C -0.51 -14.38 9.17 -34.44 -0.32 -14.69 16 7 H 0.08 2.66 7.91 -52.48 -0.42 2.25 16 8 C 0.07 1.99 5.47 -17.82 -0.10 1.89 16 9 N -0.90 -27.85 13.96 55.43 0.77 -27.07 16 10 Si 0.87 21.36 27.37 -169.99 -4.65 16.71 16 11 H -0.28 -6.69 7.11 56.52 0.40 -6.29 16 12 H -0.29 -7.01 7.11 56.52 0.40 -6.61 16 13 H -0.27 -6.28 6.68 56.52 0.38 -5.90 16 14 C 0.10 1.90 4.99 -4.98 -0.02 1.88 16 15 C 0.18 2.92 5.67 -82.59 -0.47 2.45 16 16 C -0.17 -2.16 8.10 -39.44 -0.32 -2.47 16 17 C -0.07 -0.68 10.17 -39.29 -0.40 -1.08 16 18 C -0.17 -1.96 9.88 -39.40 -0.39 -2.35 16 19 C 0.18 2.73 7.27 -17.45 -0.13 2.60 16 20 Cl -0.04 -0.56 29.11 -51.86 -1.51 -2.07 16 21 N -0.45 -8.24 10.25 -6.62 -0.07 -8.30 16 22 H 0.06 1.05 6.30 -51.93 -0.33 0.72 16 23 H 0.05 0.63 8.14 -51.93 -0.42 0.21 16 24 H 0.06 1.05 8.14 -51.93 -0.42 0.63 16 25 H 0.07 1.06 5.82 -51.93 -0.30 0.76 16 26 H 0.05 0.70 6.59 -51.93 -0.34 0.36 16 27 H 0.05 0.64 8.14 -51.93 -0.42 0.21 16 28 H 0.06 1.01 6.75 -51.93 -0.35 0.66 16 29 H -0.01 -0.21 6.72 -51.93 -0.35 -0.56 16 30 H 0.03 0.72 5.05 -51.93 -0.26 0.46 16 31 H 0.26 7.61 8.31 -40.82 -0.34 7.27 16 32 H 0.11 2.31 7.34 -51.93 -0.38 1.93 16 33 H 0.05 0.75 6.32 -51.93 -0.33 0.42 16 34 H 0.14 1.42 8.06 -52.49 -0.42 1.00 16 35 H 0.14 0.95 8.06 -52.49 -0.42 0.53 16 36 H 0.14 1.22 8.06 -52.49 -0.42 0.79 16 LS Contribution 305.21 15.07 4.60 4.60 Total: -1.00 -31.71 305.21 -8.29 -40.00 By element: Atomic # 1 Polarization: 3.59 SS G_CDS: -4.75 Total: -1.16 kcal Atomic # 6 Polarization: -9.67 SS G_CDS: -1.68 Total: -11.35 kcal Atomic # 7 Polarization: -46.43 SS G_CDS: -0.30 Total: -46.73 kcal Atomic # 14 Polarization: 21.36 SS G_CDS: -4.65 Total: 16.71 kcal Atomic # 17 Polarization: -0.56 SS G_CDS: -1.51 Total: -2.07 kcal Total LS contribution 4.60 Total: 4.60 kcal Total: -31.71 -8.29 -40.00 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000072686371.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 74.892 kcal (2) G-P(sol) polarization free energy of solvation -31.706 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 43.187 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.294 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.000 kcal (6) G-S(sol) free energy of system = (1) + (5) 34.892 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds