Wall clock time and date at job start Mon Mar 30 2020 06:30:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.53001 * 109.46891 * 2 1 4 4 C 1.52999 * 109.46901 * 174.99709 * 3 2 1 5 5 C 1.53004 * 109.47257 * 185.00005 * 4 3 2 6 6 N 1.46501 * 109.47324 * 294.99929 * 3 2 1 7 7 C 1.38411 * 119.99937 * 155.00153 * 6 3 2 8 8 N 1.32750 * 119.43662 * 0.02562 * 7 6 3 9 9 C 1.31465 * 121.73894 * 179.97438 * 8 7 6 10 10 C 1.40792 * 120.38882 * 0.02562 * 9 8 7 11 11 C 1.41199 * 120.56183 * 180.02562 * 10 9 8 12 12 H 1.08000 * 120.00246 * 335.70813 * 11 10 9 13 13 C 1.39872 * 119.99916 * 155.71198 * 11 10 9 14 14 N 1.30911 * 119.99775 * 343.23885 * 13 11 10 15 15 Si 1.86799 * 120.00203 * 163.24058 * 13 11 10 16 16 H 1.48507 * 109.46824 * 359.97438 * 15 13 11 17 17 H 1.48501 * 109.47213 * 119.99718 * 15 13 11 18 18 H 1.48494 * 109.47013 * 239.99954 * 15 13 11 19 19 C 1.41281 * 118.87003 * 359.97438 * 10 9 8 20 20 C 1.36664 * 118.40409 * 0.02562 * 19 10 9 21 21 Cl 1.73593 * 120.26527 * 179.97438 * 20 19 10 22 22 H 1.09004 * 109.47380 * 300.00007 * 1 2 3 23 23 H 1.09007 * 109.47352 * 59.99767 * 1 2 3 24 24 H 1.08998 * 109.47302 * 179.97438 * 1 2 3 25 25 H 1.08996 * 109.46686 * 240.00449 * 2 1 3 26 26 H 1.08997 * 109.46709 * 119.99867 * 2 1 3 27 27 H 1.09003 * 109.47281 * 55.00014 * 3 2 1 28 28 H 1.08992 * 109.47661 * 305.00244 * 4 3 2 29 29 H 1.09002 * 109.47035 * 65.00481 * 4 3 2 30 30 H 1.08993 * 109.47489 * 180.02562 * 5 4 3 31 31 H 1.09002 * 109.46859 * 300.00673 * 5 4 3 32 32 H 1.08998 * 109.46845 * 59.99787 * 5 4 3 33 33 H 0.96998 * 119.99959 * 335.00228 * 6 3 2 34 34 H 1.08001 * 119.80761 * 180.27761 * 9 8 7 35 35 H 0.97002 * 119.99496 * 180.02562 * 14 13 11 36 36 H 1.07999 * 120.79479 * 179.97438 * 19 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 3.5648 1.4444 0.1258 5 6 4.0645 2.8851 0.2512 6 7 1.6524 2.0975 -1.2518 7 6 1.5222 3.4746 -1.3008 8 7 1.7516 4.1910 -0.2070 9 6 1.6418 5.5010 -0.2026 10 6 1.2721 6.1887 -1.3743 11 6 1.1536 7.5957 -1.3739 12 1 0.9553 8.1207 -0.4511 13 6 1.2929 8.3096 -2.5686 14 7 1.8471 7.7416 -3.6097 15 14 0.6882 10.0736 -2.6785 16 1 0.1047 10.4790 -1.3745 17 1 1.8265 10.9673 -3.0112 18 1 -0.3479 10.1766 -3.7373 19 6 1.0229 5.4470 -2.5507 20 6 1.1512 4.0873 -2.5013 21 17 0.8560 3.1287 -3.9181 22 1 -0.3634 0.5138 0.8900 23 1 -0.3634 0.5139 -0.8900 24 1 -0.3634 -1.0276 -0.0005 25 1 1.8933 -0.5138 -0.8900 26 1 1.8933 -0.5138 0.8900 27 1 1.6053 1.9816 0.8418 28 1 3.8570 0.8801 1.0113 29 1 4.0029 0.9837 -0.7596 30 1 5.1507 2.8864 0.3404 31 1 3.7722 3.4494 -0.6344 32 1 3.6263 3.3458 1.1365 33 1 1.4871 1.5661 -2.0463 34 1 1.8402 6.0534 0.7040 35 1 1.9441 8.2368 -4.4381 36 1 0.7371 5.9426 -3.4667 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000309881620.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:30:57 Heat of formation + Delta-G solvation = 6.821736 kcal Electronic energy + Delta-G solvation = -18543.673687 eV Core-core repulsion = 15666.715979 eV Total energy + Delta-G solvation = -2876.957708 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 268.104 amu Computer time = 0.39 seconds Orbital eigenvalues (eV) -39.00148 -36.86160 -35.54823 -34.05030 -32.00579 -31.66103 -30.45167 -28.82518 -26.07939 -24.54691 -22.27796 -21.64119 -21.18098 -19.81139 -17.41484 -16.81402 -15.91867 -15.23210 -14.49535 -14.27153 -13.99615 -13.65586 -13.64262 -12.92409 -12.76720 -12.48044 -12.05410 -11.95189 -11.75920 -11.42983 -11.27930 -11.23625 -10.94829 -10.78345 -10.73850 -10.65146 -10.38766 -10.30093 -10.19970 -9.81099 -9.46629 -8.76495 -8.24700 -8.05655 -6.89876 -6.64546 -4.28862 2.53065 2.81297 3.06518 3.11173 3.18091 3.22673 3.90424 4.21005 4.58446 5.01249 5.30272 5.32608 5.55966 5.67176 5.78007 5.78553 5.91354 6.00944 6.09503 6.21642 6.27980 6.37716 6.43615 6.52915 6.54594 6.65619 6.77915 6.97444 7.08809 7.13261 7.19961 7.67697 7.71768 8.15889 8.39543 8.46845 8.70496 8.74906 9.55566 10.14518 Molecular weight = 268.10amu Principal moments of inertia in cm(-1) A = 0.025644 B = 0.005738 C = 0.005186 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1091.592198 B = 4878.743365 C = 5398.185320 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C -0.131 4.131 3 C 0.167 3.833 4 C -0.130 4.130 5 C -0.137 4.137 6 N -0.733 5.733 7 C 0.296 3.704 8 N -0.494 5.494 9 C 0.014 3.986 10 C 0.036 3.964 11 C -0.453 4.453 12 H 0.082 0.918 13 C 0.073 3.927 14 N -0.800 5.800 15 Si 0.909 3.091 16 H -0.260 1.260 17 H -0.275 1.275 18 H -0.273 1.273 19 C -0.088 4.088 20 C -0.106 4.106 21 Cl -0.117 7.117 22 H 0.053 0.947 23 H 0.058 0.942 24 H 0.046 0.954 25 H 0.059 0.941 26 H 0.067 0.933 27 H 0.082 0.918 28 H 0.053 0.947 29 H 0.050 0.950 30 H 0.028 0.972 31 H 0.065 0.935 32 H 0.060 0.940 33 H 0.394 0.606 34 H 0.133 0.867 35 H 0.281 0.719 36 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.434 -8.679 2.835 9.141 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.169 4.169 3 C 0.061 3.939 4 C -0.170 4.170 5 C -0.194 4.194 6 N -0.373 5.373 7 C 0.062 3.938 8 N -0.210 5.210 9 C -0.144 4.144 10 C 0.031 3.969 11 C -0.484 4.484 12 H 0.100 0.900 13 C -0.144 4.144 14 N -0.426 5.426 15 Si 0.734 3.266 16 H -0.184 1.184 17 H -0.200 1.200 18 H -0.198 1.198 19 C -0.115 4.115 20 C -0.139 4.139 21 Cl -0.089 7.089 22 H 0.072 0.928 23 H 0.077 0.923 24 H 0.065 0.935 25 H 0.078 0.922 26 H 0.086 0.914 27 H 0.100 0.900 28 H 0.072 0.928 29 H 0.069 0.931 30 H 0.047 0.953 31 H 0.084 0.916 32 H 0.079 0.921 33 H 0.230 0.770 34 H 0.150 0.850 35 H 0.092 0.908 36 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -0.106 -9.130 3.417 9.749 hybrid contribution -0.427 1.038 -1.490 1.865 sum -0.534 -8.092 1.927 8.335 Atomic orbital electron populations 1.21719 0.95668 1.00642 1.02498 1.21816 0.96344 0.96918 1.01826 1.20666 0.93174 0.91323 0.88783 1.21974 0.96819 0.97960 1.00203 1.21758 0.97762 0.96079 1.03821 1.43863 1.79341 1.02390 1.11663 1.17395 1.02895 0.85069 0.88411 1.66923 1.19005 1.08856 1.26170 1.22360 1.05344 0.88194 0.98547 1.18295 0.93022 0.94569 0.91044 1.19350 1.43112 0.91037 0.94854 0.90012 1.25886 0.92575 1.00763 0.95179 1.69808 1.31003 1.38758 1.03042 0.86242 0.79261 0.81644 0.79497 1.18377 1.20031 1.19783 1.21284 0.99954 0.89315 1.00982 1.20943 1.14202 0.92626 0.86090 1.98238 1.95346 1.73059 1.42278 0.92816 0.92299 0.93461 0.92221 0.91398 0.90036 0.92838 0.93092 0.95282 0.91568 0.92082 0.77038 0.84989 0.90805 0.84433 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.81 9.80 37.16 0.36 -1.45 16 2 C -0.13 -1.60 5.47 -26.73 -0.15 -1.75 16 3 C 0.17 2.57 2.26 -67.93 -0.15 2.42 16 4 C -0.13 -1.95 5.61 -26.73 -0.15 -2.10 16 5 C -0.14 -2.39 8.44 37.16 0.31 -2.08 16 6 N -0.73 -13.05 4.55 -53.83 -0.24 -13.29 16 7 C 0.30 6.35 6.04 -155.05 -0.94 5.41 16 8 N -0.49 -10.92 6.31 -11.75 -0.07 -10.99 16 9 C 0.01 0.34 10.97 -16.74 -0.18 0.15 16 10 C 0.04 0.92 5.59 -106.65 -0.60 0.32 16 11 C -0.45 -11.35 9.07 -37.85 -0.34 -11.70 16 12 H 0.08 1.96 7.90 -52.49 -0.41 1.54 16 13 C 0.07 1.76 5.18 -17.33 -0.09 1.67 16 14 N -0.80 -20.10 10.91 55.54 0.61 -19.49 16 15 Si 0.91 18.14 29.59 -169.99 -5.03 13.11 16 16 H -0.26 -5.12 7.11 56.52 0.40 -4.72 16 17 H -0.27 -5.44 7.11 56.52 0.40 -5.04 16 18 H -0.27 -5.40 7.11 56.52 0.40 -5.00 16 19 C -0.09 -2.20 8.52 -38.99 -0.33 -2.53 16 20 C -0.11 -2.41 6.32 -39.57 -0.25 -2.66 16 21 Cl -0.12 -2.28 27.56 -51.86 -1.43 -3.71 16 22 H 0.05 0.67 8.14 -51.93 -0.42 0.25 16 23 H 0.06 0.80 7.75 -51.92 -0.40 0.40 16 24 H 0.05 0.49 8.14 -51.93 -0.42 0.07 16 25 H 0.06 0.70 8.14 -51.93 -0.42 0.27 16 26 H 0.07 0.73 8.14 -51.93 -0.42 0.30 16 27 H 0.08 1.41 7.51 -51.93 -0.39 1.02 16 28 H 0.05 0.69 8.14 -51.93 -0.42 0.27 16 29 H 0.05 0.75 8.14 -51.93 -0.42 0.33 16 30 H 0.03 0.46 8.14 -51.93 -0.42 0.03 16 31 H 0.07 1.38 5.59 -51.93 -0.29 1.09 16 32 H 0.06 1.10 7.65 -51.93 -0.40 0.70 16 33 H 0.39 6.66 7.21 -40.82 -0.29 6.37 16 34 H 0.13 2.85 8.06 -52.49 -0.42 2.43 16 35 H 0.28 6.47 8.30 -40.82 -0.34 6.13 16 36 H 0.14 3.59 6.20 -52.49 -0.33 3.26 16 LS Contribution 306.68 15.07 4.62 4.62 Total: -1.00 -25.24 306.68 -9.09 -34.32 By element: Atomic # 1 Polarization: 14.75 SS G_CDS: -5.03 Total: 9.72 kcal Atomic # 6 Polarization: -11.78 SS G_CDS: -2.50 Total: -14.28 kcal Atomic # 7 Polarization: -44.06 SS G_CDS: 0.29 Total: -43.78 kcal Atomic # 14 Polarization: 18.14 SS G_CDS: -5.03 Total: 13.11 kcal Atomic # 17 Polarization: -2.28 SS G_CDS: -1.43 Total: -3.71 kcal Total LS contribution 4.62 Total: 4.62 kcal Total: -25.24 -9.09 -34.32 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000309881620.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 41.143 kcal (2) G-P(sol) polarization free energy of solvation -25.235 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 15.907 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.086 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.321 kcal (6) G-S(sol) free energy of system = (1) + (5) 6.822 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.39 seconds