Wall clock time and date at job start Mon Mar 30 2020 06:30:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.53000 * 109.46890 * 2 1 4 4 C 1.52998 * 109.46818 * 119.99911 * 2 1 3 5 5 C 1.53000 * 109.47399 * 66.00763 * 4 2 1 6 6 H 1.09001 * 109.47282 * 172.93034 * 5 4 2 7 7 C 1.50703 * 109.46840 * 292.92319 * 5 4 2 8 8 H 1.08007 * 119.99515 * 120.00124 * 7 5 4 9 9 C 1.37868 * 120.00423 * 300.00142 * 7 5 4 10 10 N 1.31519 * 120.00397 * 359.97438 * 9 7 5 11 11 Si 1.86807 * 120.00192 * 179.97438 * 9 7 5 12 12 H 1.48501 * 109.47097 * 59.99809 * 11 9 7 13 13 H 1.48497 * 109.47366 * 179.97438 * 11 9 7 14 14 H 1.48495 * 109.46998 * 299.99984 * 11 9 7 15 15 N 1.46491 * 109.47203 * 52.92465 * 5 4 2 16 16 C 1.39778 * 119.99792 * 83.65042 * 15 5 4 17 17 C 1.39336 * 120.47456 * 173.48351 * 16 15 5 18 18 C 1.38463 * 118.36896 * 179.73766 * 17 16 15 19 19 C 1.38423 * 119.22851 * 0.55946 * 18 17 16 20 20 Cl 1.73605 * 119.54913 * 179.67909 * 19 18 17 21 21 N 1.31925 * 120.89681 * 359.70016 * 19 18 17 22 22 C 1.31858 * 121.77908 * 0.02562 * 21 19 18 23 23 H 1.08998 * 109.47552 * 287.96308 * 1 2 3 24 24 H 1.09005 * 109.46844 * 47.96191 * 1 2 3 25 25 H 1.08999 * 109.47306 * 167.95797 * 1 2 3 26 26 H 1.08995 * 109.47127 * 239.99365 * 2 1 3 27 27 H 1.09008 * 109.46788 * 180.02562 * 3 2 1 28 28 H 1.08994 * 109.46811 * 299.99206 * 3 2 1 29 29 H 1.08988 * 109.47378 * 59.99785 * 3 2 1 30 30 H 1.09005 * 109.47137 * 306.00570 * 4 2 1 31 31 H 1.08997 * 109.47109 * 186.01213 * 4 2 1 32 32 H 0.96994 * 120.00109 * 180.02562 * 10 9 7 33 33 H 0.96994 * 120.00360 * 263.65658 * 15 5 4 34 34 H 1.07995 * 120.81494 * 359.97438 * 17 16 15 35 35 H 1.07994 * 120.38258 * 180.25919 * 18 17 16 36 36 H 1.08005 * 119.65799 * 179.97438 * 22 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0399 -0.7212 1.2493 5 6 1.6569 -2.2007 1.1761 6 1 2.1257 -2.7386 2.0002 7 6 0.1593 -2.3373 1.2746 8 1 -0.3951 -2.7961 0.4692 9 6 -0.5029 -1.8767 2.3926 10 7 0.1722 -1.3185 3.3736 11 14 -2.3594 -2.0454 2.5143 12 1 -2.7317 -3.4812 2.4430 13 1 -2.8245 -1.4775 3.8052 14 1 -2.9976 -1.3122 1.3918 15 7 2.1158 -2.7616 -0.0970 16 6 3.4341 -3.2067 -0.2299 17 6 3.8447 -3.8641 -1.3877 18 6 5.1620 -4.2815 -1.4753 19 6 6.0182 -4.0445 -0.4138 20 17 7.6694 -4.5717 -0.5113 21 7 5.5963 -3.4238 0.6712 22 6 4.3517 -3.0056 0.7924 23 1 -0.3634 0.3169 0.9775 24 1 -0.3633 0.6882 -0.7633 25 1 -0.3634 -1.0050 -0.2144 26 1 1.8933 -0.5139 -0.8899 27 1 3.1300 1.4425 -0.0005 28 1 1.6767 1.9562 -0.8900 29 1 1.6766 1.9563 0.8899 30 1 1.5914 -0.2732 2.1360 31 1 3.1246 -0.6290 1.3048 32 1 -0.2937 -0.9947 4.1603 33 1 1.5049 -2.8240 -0.8478 34 1 3.1534 -4.0404 -2.1985 35 1 5.5161 -4.7904 -2.3596 36 1 4.0429 -2.5014 1.6963 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000381448407.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:30:44 Heat of formation + Delta-G solvation = 15.464617 kcal Electronic energy + Delta-G solvation = -18587.032913 eV Core-core repulsion = 15710.449988 eV Total energy + Delta-G solvation = -2876.582924 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 268.104 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -39.83648 -37.30765 -36.13667 -34.12655 -32.68852 -31.85341 -29.49217 -27.29875 -26.51984 -25.16081 -23.44910 -22.42608 -20.83600 -18.89557 -17.45013 -16.91587 -15.87345 -15.85075 -14.86693 -14.37055 -14.11339 -13.87710 -13.74155 -13.15445 -12.88010 -12.75769 -12.24118 -11.85400 -11.76843 -11.56285 -11.10216 -11.04347 -10.97263 -10.94009 -10.63549 -10.30724 -10.19394 -9.88743 -9.70047 -9.58867 -9.22851 -9.14072 -9.09918 -8.43890 -6.84471 -6.25051 -4.26733 1.51800 1.72909 2.31585 3.17245 3.23495 3.25374 4.07699 4.17321 4.33702 4.98330 5.07091 5.24005 5.32238 5.49325 5.76650 5.82125 5.91414 5.95438 6.21014 6.35552 6.40365 6.47946 6.54176 6.65891 6.74860 6.91075 6.91654 7.01235 7.20005 7.30462 7.53396 7.54233 7.66528 7.90997 8.11079 8.21470 8.46318 8.71526 9.31884 10.80044 Molecular weight = 268.10amu Principal moments of inertia in cm(-1) A = 0.026260 B = 0.005011 C = 0.004686 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1065.986282 B = 5586.281425 C = 5973.416315 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.133 4.133 2 C -0.076 4.076 3 C -0.144 4.144 4 C -0.125 4.125 5 C 0.268 3.732 6 H 0.042 0.958 7 C -0.519 4.519 8 H 0.062 0.938 9 C 0.072 3.928 10 N -0.881 5.881 11 Si 0.891 3.109 12 H -0.277 1.277 13 H -0.286 1.286 14 H -0.273 1.273 15 N -0.705 5.705 16 C 0.197 3.803 17 C -0.172 4.172 18 C -0.099 4.099 19 C 0.084 3.916 20 Cl -0.065 7.065 21 N -0.438 5.438 22 C 0.039 3.961 23 H 0.052 0.948 24 H 0.012 0.988 25 H 0.081 0.919 26 H 0.048 0.952 27 H 0.041 0.959 28 H 0.039 0.961 29 H 0.049 0.951 30 H 0.104 0.896 31 H 0.021 0.979 32 H 0.266 0.734 33 H 0.394 0.606 34 H 0.134 0.866 35 H 0.133 0.867 36 H 0.165 0.835 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.014 -1.525 -7.972 9.540 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.190 4.190 2 C -0.095 4.095 3 C -0.202 4.202 4 C -0.164 4.164 5 C 0.166 3.834 6 H 0.059 0.941 7 C -0.557 4.557 8 H 0.080 0.920 9 C -0.131 4.131 10 N -0.519 5.519 11 Si 0.718 3.282 12 H -0.202 1.202 13 H -0.211 1.211 14 H -0.199 1.199 15 N -0.325 5.325 16 C 0.082 3.918 17 C -0.203 4.203 18 C -0.121 4.121 19 C -0.082 4.082 20 Cl -0.037 7.037 21 N -0.147 5.147 22 C -0.126 4.126 23 H 0.071 0.929 24 H 0.031 0.969 25 H 0.100 0.900 26 H 0.066 0.934 27 H 0.060 0.940 28 H 0.058 0.942 29 H 0.068 0.932 30 H 0.122 0.878 31 H 0.040 0.960 32 H 0.076 0.924 33 H 0.228 0.772 34 H 0.152 0.848 35 H 0.151 0.849 36 H 0.182 0.818 Dipole moment (debyes) X Y Z Total from point charges 5.599 -1.239 -6.889 8.963 hybrid contribution -1.638 -0.195 -0.816 1.841 sum 3.961 -1.434 -7.706 8.782 Atomic orbital electron populations 1.22068 0.95050 1.02071 0.99830 1.20827 0.96411 0.93761 0.98508 1.21872 0.99799 0.98051 1.00430 1.22115 0.96766 0.98319 0.99204 1.18884 0.94833 0.89958 0.79726 0.94071 1.20881 0.90743 1.40144 1.03978 0.92016 1.24731 0.98291 0.94717 0.95362 1.69822 1.35724 1.38929 1.07381 0.86663 0.85286 0.78564 0.77650 1.20235 1.21121 1.19875 1.45653 1.06608 1.63506 1.16734 1.19116 0.87628 0.91114 0.93910 1.20939 0.96145 1.04448 0.98800 1.21383 0.92810 0.99748 0.98142 1.20987 0.87333 1.06207 0.93674 1.98329 1.18663 1.88795 1.97897 1.66721 1.16925 1.07707 1.23381 1.22331 0.86654 1.03710 0.99893 0.92852 0.96935 0.90024 0.93400 0.93967 0.94215 0.93206 0.87766 0.96001 0.92385 0.77192 0.84805 0.84922 0.81772 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -2.58 7.76 37.16 0.29 -2.29 16 2 C -0.08 -1.42 2.78 -90.62 -0.25 -1.68 16 3 C -0.14 -2.43 9.16 37.16 0.34 -2.08 16 4 C -0.13 -2.59 4.48 -26.73 -0.12 -2.71 16 5 C 0.27 5.66 1.94 -69.09 -0.13 5.53 16 6 H 0.04 0.98 6.88 -51.93 -0.36 0.63 16 7 C -0.52 -11.83 5.32 -34.44 -0.18 -12.01 16 8 H 0.06 1.39 7.25 -52.48 -0.38 1.01 16 9 C 0.07 1.73 4.12 -17.82 -0.07 1.65 16 10 N -0.88 -22.12 11.29 55.43 0.63 -21.49 16 11 Si 0.89 19.14 29.54 -169.99 -5.02 14.12 16 12 H -0.28 -6.01 7.11 56.52 0.40 -5.61 16 13 H -0.29 -6.24 7.11 56.52 0.40 -5.84 16 14 H -0.27 -5.80 7.11 56.52 0.40 -5.39 16 15 N -0.70 -12.58 4.09 -53.17 -0.22 -12.79 16 16 C 0.20 3.38 6.64 -83.61 -0.56 2.82 16 17 C -0.17 -2.53 10.05 -39.09 -0.39 -2.92 16 18 C -0.10 -1.42 9.87 -39.43 -0.39 -1.81 16 19 C 0.08 1.38 7.27 -17.44 -0.13 1.25 16 20 Cl -0.06 -0.94 29.10 -51.86 -1.51 -2.45 16 21 N -0.44 -8.12 10.33 -10.20 -0.11 -8.23 16 22 C 0.04 0.73 9.91 -17.32 -0.17 0.56 16 23 H 0.05 1.14 7.17 -51.93 -0.37 0.77 16 24 H 0.01 0.21 8.09 -51.93 -0.42 -0.21 16 25 H 0.08 1.64 5.30 -51.93 -0.28 1.36 16 26 H 0.05 0.87 7.20 -51.93 -0.37 0.50 16 27 H 0.04 0.68 8.14 -51.92 -0.42 0.26 16 28 H 0.04 0.60 8.14 -51.93 -0.42 0.18 16 29 H 0.05 0.85 8.14 -51.94 -0.42 0.43 16 30 H 0.10 2.45 5.85 -51.93 -0.30 2.15 16 31 H 0.02 0.44 6.99 -51.93 -0.36 0.07 16 32 H 0.27 6.52 8.31 -40.82 -0.34 6.19 16 33 H 0.39 6.50 8.53 -40.82 -0.35 6.15 16 34 H 0.13 1.62 8.06 -52.49 -0.42 1.19 16 35 H 0.13 1.51 8.06 -52.49 -0.42 1.08 16 36 H 0.17 3.17 5.70 -52.48 -0.30 2.87 16 LS Contribution 302.78 15.07 4.56 4.56 Total: -1.00 -24.02 302.78 -8.18 -32.19 By element: Atomic # 1 Polarization: 12.51 SS G_CDS: -4.74 Total: 7.77 kcal Atomic # 6 Polarization: -11.92 SS G_CDS: -1.77 Total: -13.69 kcal Atomic # 7 Polarization: -42.81 SS G_CDS: 0.30 Total: -42.51 kcal Atomic # 14 Polarization: 19.14 SS G_CDS: -5.02 Total: 14.12 kcal Atomic # 17 Polarization: -0.94 SS G_CDS: -1.51 Total: -2.45 kcal Total LS contribution 4.56 Total: 4.56 kcal Total: -24.02 -8.18 -32.19 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000381448407.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 47.657 kcal (2) G-P(sol) polarization free energy of solvation -24.016 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 23.640 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.175 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.192 kcal (6) G-S(sol) free energy of system = (1) + (5) 15.465 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds