Wall clock time and date at job start Mon Mar 30 2020 06:58:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.38334 * 119.81590 * 2 1 4 4 C 1.38187 * 120.17933 * 180.02562 * 3 2 1 5 5 F 1.35100 * 120.09112 * 179.97438 * 4 3 2 6 6 C 1.39855 * 119.81705 * 359.97438 * 4 3 2 7 7 C 1.47456 * 120.17953 * 179.97438 * 6 4 3 8 8 N 1.29742 * 119.99977 * 180.02562 * 7 6 4 9 9 N 1.40096 * 120.00206 * 179.97438 * 8 7 6 10 10 C 1.46503 * 120.00388 * 180.02562 * 9 8 7 11 11 H 1.08998 * 109.46872 * 29.99961 * 10 9 8 12 12 C 1.52999 * 109.46772 * 270.00516 * 10 9 8 13 13 C 1.50693 * 109.47142 * 150.00283 * 10 9 8 14 14 H 1.08003 * 119.99968 * 5.62744 * 13 10 9 15 15 C 1.37878 * 119.99930 * 185.62515 * 13 10 9 16 16 N 1.31514 * 120.00028 * 197.20150 * 15 13 10 17 17 Si 1.86802 * 119.99709 * 17.48131 * 15 13 10 18 18 H 1.48502 * 109.46690 * 179.72405 * 17 15 13 19 19 H 1.48501 * 109.47068 * 299.72066 * 17 15 13 20 20 H 1.48495 * 109.47337 * 59.72245 * 17 15 13 21 21 C 1.39852 * 119.63905 * 0.25741 * 6 4 3 22 22 F 1.35098 * 120.08935 * 179.72639 * 21 6 4 23 23 C 1.38187 * 119.81790 * 359.50905 * 21 6 4 24 24 H 1.08992 * 109.47215 * 90.00310 * 1 2 3 25 25 H 1.09002 * 109.46623 * 210.00045 * 1 2 3 26 26 H 1.09002 * 109.47327 * 329.99933 * 1 2 3 27 27 H 1.08000 * 119.91228 * 0.02562 * 3 2 1 28 28 H 1.07997 * 119.99993 * 0.02562 * 7 6 4 29 29 H 0.97006 * 119.99599 * 0.02562 * 9 8 7 30 30 H 1.08996 * 109.47683 * 66.31724 * 12 10 9 31 31 H 1.09008 * 109.46590 * 186.31222 * 12 10 9 32 32 H 1.09000 * 109.47312 * 306.30889 * 12 10 9 33 33 H 0.96998 * 120.00391 * 355.16066 * 16 15 13 34 34 H 1.07997 * 119.90960 * 180.23685 * 23 21 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1949 1.2002 0.0000 4 6 3.5767 1.2090 -0.0005 5 9 4.2466 2.3822 -0.0011 6 6 4.2798 0.0000 -0.0005 7 6 5.7543 0.0000 -0.0017 8 7 6.4031 -1.1236 -0.0022 9 7 7.8040 -1.1236 -0.0038 10 6 8.5366 -2.3923 -0.0049 11 1 7.9469 -3.1518 -0.5182 12 6 8.7931 -2.8343 1.4372 13 6 9.8525 -2.2119 -0.7167 14 1 10.1576 -1.2299 -1.0471 15 6 10.6671 -3.3004 -0.9462 16 7 11.9343 -3.1212 -1.2489 17 14 9.9688 -5.0294 -0.8348 18 1 11.0395 -6.0155 -1.1291 19 1 9.4428 -5.2636 0.5341 20 1 8.8691 -5.1836 -1.8207 21 6 3.5767 -1.2089 -0.0055 22 9 4.2467 -2.3821 -0.0111 23 6 2.1949 -1.2002 0.0000 24 1 -0.3633 -0.0001 -1.0276 25 1 -0.3633 -0.8900 0.5139 26 1 -0.3634 0.8900 0.5138 27 1 1.6504 2.1330 0.0004 28 1 6.2943 0.9353 -0.0021 29 1 8.2890 -0.2835 -0.0042 30 1 7.8447 -3.0728 1.9184 31 1 9.4331 -3.7167 1.4383 32 1 9.2846 -2.0284 1.9823 33 1 12.2796 -2.2243 -1.3797 34 1 1.6505 -2.1329 0.0001 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000819809105.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:58:58 Heat of formation + Delta-G solvation = -28.274310 kcal Electronic energy + Delta-G solvation = -19530.198586 eV Core-core repulsion = 16099.922319 eV Total energy + Delta-G solvation = -3430.276267 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 268.108 amu Computer time = 0.35 seconds Orbital eigenvalues (eV) -48.99555 -48.63733 -39.06036 -36.71254 -34.46864 -32.78434 -31.37854 -30.40502 -28.72045 -26.56551 -24.74146 -23.01316 -22.51808 -20.56282 -20.14712 -17.93265 -17.56681 -17.35461 -16.19195 -15.95024 -15.75412 -15.40604 -15.09750 -14.73365 -14.17726 -13.76558 -13.70866 -13.28531 -13.19657 -12.92875 -12.70504 -12.14004 -12.07081 -11.91120 -11.84342 -11.60656 -11.40873 -11.04590 -10.51871 -10.06878 -9.82720 -9.62966 -9.16851 -8.90641 -8.79804 -8.34715 -7.08798 -6.57823 -4.23747 0.68418 0.95472 2.67545 3.34743 3.41310 3.46678 3.54063 3.59054 3.86265 4.32380 4.39219 4.47259 4.65657 4.87401 4.98595 5.15031 5.15066 5.29670 5.45032 5.61941 5.73736 5.81043 5.96979 6.09332 6.17915 6.30563 6.52229 6.60701 6.66199 6.75808 7.01514 7.32660 7.81221 7.91889 8.24404 8.77125 9.05180 9.45310 10.80027 Molecular weight = 268.11amu Principal moments of inertia in cm(-1) A = 0.031989 B = 0.004229 C = 0.003867 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 875.091405 B = 6619.208188 C = 7239.732154 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.113 4.113 2 C -0.042 4.042 3 C -0.165 4.165 4 C 0.134 3.866 5 F -0.130 7.130 6 C -0.079 4.079 7 C -0.023 4.023 8 N -0.177 5.177 9 N -0.609 5.609 10 C 0.274 3.726 11 H 0.037 0.963 12 C -0.163 4.163 13 C -0.617 4.617 14 H 0.060 0.940 15 C 0.039 3.961 16 N -0.897 5.897 17 Si 1.044 2.956 18 H -0.282 1.282 19 H -0.271 1.271 20 H -0.280 1.280 21 C 0.147 3.853 22 F -0.108 7.108 23 C -0.167 4.167 24 H 0.076 0.924 25 H 0.071 0.929 26 H 0.071 0.929 27 H 0.140 0.860 28 H 0.112 0.888 29 H 0.375 0.625 30 H 0.027 0.973 31 H 0.063 0.937 32 H 0.043 0.957 33 H 0.269 0.731 34 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -22.278 6.655 3.406 23.498 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.169 4.169 2 C -0.043 4.043 3 C -0.184 4.184 4 C 0.112 3.888 5 F -0.108 7.108 6 C -0.084 4.084 7 C -0.229 4.229 8 N 0.009 4.991 9 N -0.345 5.345 10 C 0.170 3.830 11 H 0.054 0.946 12 C -0.222 4.222 13 C -0.656 4.656 14 H 0.078 0.922 15 C -0.168 4.168 16 N -0.530 5.530 17 Si 0.871 3.129 18 H -0.208 1.208 19 H -0.197 1.197 20 H -0.206 1.206 21 C 0.125 3.875 22 F -0.086 7.086 23 C -0.186 4.186 24 H 0.095 0.905 25 H 0.090 0.910 26 H 0.090 0.910 27 H 0.158 0.842 28 H 0.130 0.870 29 H 0.211 0.789 30 H 0.047 0.953 31 H 0.082 0.918 32 H 0.062 0.938 33 H 0.079 0.921 34 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges -21.703 3.868 3.313 22.293 hybrid contribution 0.465 3.003 0.044 3.039 sum -21.239 6.871 3.357 22.574 Atomic orbital electron populations 1.20806 0.89932 1.03308 1.02882 1.19490 0.96426 0.91257 0.97149 1.20854 0.91604 0.99447 1.06535 1.17243 0.89507 0.79980 1.02063 1.91501 1.80760 1.44935 1.93625 1.18428 0.92346 0.91254 1.06331 1.23090 0.91459 0.94942 1.13429 1.74095 0.96053 1.26284 1.02655 1.48873 0.96619 1.09552 1.79478 1.18865 0.90567 0.80929 0.92620 0.94562 1.22620 0.99160 1.01170 0.99277 1.22104 1.03626 0.97068 1.42810 0.92175 1.25721 0.93563 1.04176 0.93325 1.70873 1.12077 1.25756 1.44314 0.84060 0.75844 0.75328 0.77637 1.20790 1.19704 1.20559 1.17435 0.89328 0.81091 0.99636 1.91626 1.80415 1.43851 1.92713 1.20996 0.91933 0.99511 1.06127 0.90534 0.90971 0.91036 0.84213 0.87027 0.78860 0.95347 0.91843 0.93778 0.92083 0.84174 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -0.65 10.00 36.01 0.36 -0.29 16 2 C -0.04 -0.38 5.88 -104.55 -0.62 -1.00 16 3 C -0.17 -1.65 9.66 -39.56 -0.38 -2.03 16 4 C 0.13 1.72 7.28 -39.00 -0.28 1.44 16 5 F -0.13 -1.72 16.62 2.25 0.04 -1.68 16 6 C -0.08 -1.21 5.88 -104.93 -0.62 -1.83 16 7 C -0.02 -0.40 10.54 -14.68 -0.15 -0.56 16 8 N -0.18 -3.69 9.54 32.15 0.31 -3.39 16 9 N -0.61 -13.68 6.10 -5.88 -0.04 -13.72 16 10 C 0.27 6.78 2.82 -69.08 -0.19 6.59 16 11 H 0.04 0.94 6.80 -51.93 -0.35 0.59 16 12 C -0.16 -3.74 9.19 37.16 0.34 -3.40 16 13 C -0.62 -17.23 9.01 -34.44 -0.31 -17.54 16 14 H 0.06 1.78 8.01 -52.48 -0.42 1.36 16 15 C 0.04 1.10 5.29 -17.82 -0.09 1.01 16 16 N -0.90 -27.04 13.70 55.43 0.76 -26.28 16 17 Si 1.04 24.94 26.29 -169.99 -4.47 20.47 16 18 H -0.28 -6.72 7.11 56.52 0.40 -6.31 16 19 H -0.27 -5.98 5.76 56.52 0.33 -5.65 16 20 H -0.28 -6.48 7.11 56.52 0.40 -6.08 16 21 C 0.15 2.17 7.28 -39.00 -0.28 1.88 16 22 F -0.11 -1.89 15.36 2.25 0.03 -1.86 16 23 C -0.17 -1.83 9.66 -39.56 -0.38 -2.22 16 24 H 0.08 0.38 8.14 -51.93 -0.42 -0.05 16 25 H 0.07 0.35 8.08 -51.93 -0.42 -0.07 16 26 H 0.07 0.33 8.08 -51.93 -0.42 -0.09 16 27 H 0.14 1.03 8.06 -52.49 -0.42 0.61 16 28 H 0.11 1.85 7.71 -52.49 -0.40 1.45 16 29 H 0.37 7.96 8.56 -182.59 -1.56 6.39 16 30 H 0.03 0.60 8.14 -51.93 -0.42 0.17 16 31 H 0.06 1.47 4.88 -51.92 -0.25 1.21 16 32 H 0.04 0.98 8.14 -51.93 -0.42 0.56 16 33 H 0.27 8.06 8.73 -40.82 -0.36 7.71 16 34 H 0.14 1.23 8.06 -52.49 -0.42 0.81 16 LS Contribution 301.45 15.07 4.54 4.54 Total: -1.00 -30.62 301.45 -6.62 -37.24 By element: Atomic # 1 Polarization: 7.79 SS G_CDS: -5.18 Total: 2.61 kcal Atomic # 6 Polarization: -15.31 SS G_CDS: -2.62 Total: -17.93 kcal Atomic # 7 Polarization: -44.42 SS G_CDS: 1.03 Total: -43.39 kcal Atomic # 9 Polarization: -3.61 SS G_CDS: 0.07 Total: -3.54 kcal Atomic # 14 Polarization: 24.94 SS G_CDS: -4.47 Total: 20.47 kcal Total LS contribution 4.54 Total: 4.54 kcal Total: -30.62 -6.62 -37.24 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000819809105.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 8.964 kcal (2) G-P(sol) polarization free energy of solvation -30.622 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -21.659 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.616 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.238 kcal (6) G-S(sol) free energy of system = (1) + (5) -28.274 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds